RNA–Protein interactions for RNA: ENSMUST00000085096.9

Ccdc88c-202, Transcript of Protein Daple, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ccdc88c, Length 6,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-202ENSMUST00000085096 ArxO35085 564 aa20.41■□□□□ 0.86
Ccdc88c-202ENSMUST00000085096 Rad21Q61550 635 aaKnown RBP20.4■□□□□ 0.86
Ccdc88c-202ENSMUST00000085096 ScribQ80U72 1612 aa20.39■□□□□ 0.85
Ccdc88c-202ENSMUST00000085096 Ecm2Q5FW85 670 aa20.38■□□□□ 0.85
Ccdc88c-202ENSMUST00000085096 Stk24Q99KH8 431 aa20.38■□□□□ 0.85
Ccdc88c-202ENSMUST00000085096 Grwd1Q810D6 446 aaKnown RBP20.37■□□□□ 0.85
Ccdc88c-202ENSMUST00000085096 Gm38655A0A286YDK6 273 aa20.35■□□□□ 0.85
Ccdc88c-202ENSMUST00000085096 Cecr2E9Q2Z1 1453 aa20.34■□□□□ 0.85
Ccdc88c-202ENSMUST00000085096 MlecQ6ZQI3 291 aaKnown RBP20.31■□□□□ 0.84
Ccdc88c-202ENSMUST00000085096 Trim26Q99PN3 545 aa20.3■□□□□ 0.84
Ccdc88c-202ENSMUST00000085096 Rpap1Q80TE0 1409 aa20.29■□□□□ 0.84
Ccdc88c-202ENSMUST00000085096 ClspnQ80YR7 1315 aa20.27■□□□□ 0.84
Ccdc88c-202ENSMUST00000085096 Ccdc88bQ4QRL3 1481 aa20.22■□□□□ 0.83
Ccdc88c-202ENSMUST00000085096 Cux2P70298 1426 aa20.21■□□□□ 0.83
Ccdc88c-202ENSMUST00000085096 DiexfQ8BTT6 772 aaKnown RBP20.19■□□□□ 0.82
Ccdc88c-202ENSMUST00000085096 Sall2Q9QX96 1004 aa20.18■□□□□ 0.82
Ccdc88c-202ENSMUST00000085096 4933416C03RikQ3V063 378 aa20.17■□□□□ 0.82
Ccdc88c-202ENSMUST00000085096 Synj1Q8CHC4 1574 aa20.16■□□□□ 0.82
Ccdc88c-202ENSMUST00000085096 Cnga1P29974 684 aa20.16■□□□□ 0.82
Ccdc88c-202ENSMUST00000085096 Tnnt3Q9QZ47 272 aa20.16■□□□□ 0.82
Ccdc88c-202ENSMUST00000085096 Eea1Q8BL66 1411 aa20.15■□□□□ 0.82
Ccdc88c-202ENSMUST00000085096 Hdac5Q9Z2V6 1113 aa20.14■□□□□ 0.82
Ccdc88c-202ENSMUST00000085096 Clstn2Q9ER65 966 aa20.12■□□□□ 0.81
Ccdc88c-202ENSMUST00000085096 Mroh3A0A1D5RM54 893 aa20.11■□□□□ 0.81
Ccdc88c-202ENSMUST00000085096 Srpk2O54781 681 aaKnown RBP20.09■□□□□ 0.81
Ccdc88c-202ENSMUST00000085096 Gm20521D3Z5F7 333 aa20.08■□□□□ 0.81
Ccdc88c-202ENSMUST00000085096 Baz1bQ9Z277 1479 aa20.07■□□□□ 0.8
Ccdc88c-202ENSMUST00000085096 Mtus2Q3UHD3 1353 aa20.07■□□□□ 0.8
Ccdc88c-202ENSMUST00000085096 Stag3O70576 1240 aa20.03■□□□□ 0.8
Ccdc88c-202ENSMUST00000085096 IqubQ8CDK3 788 aa20.02■□□□□ 0.79
Ccdc88c-202ENSMUST00000085096 Kif27Q7M6Z4 1394 aa20.01■□□□□ 0.79
Ccdc88c-202ENSMUST00000085096 Stk26Q99JT2 416 aa20.01■□□□□ 0.79
Ccdc88c-202ENSMUST00000085096 Exosc9Q9JHI7 438 aaKnown RBP20.01■□□□□ 0.79
Ccdc88c-202ENSMUST00000085096 Ccer2J3QPU5 274 aa19.98■□□□□ 0.79
Ccdc88c-202ENSMUST00000085096 Smarca4Q3TKT4 1613 aaKnown RBP19.98■□□□□ 0.79
Ccdc88c-202ENSMUST00000085096 Arid4bA2CG63 1314 aaKnown RBP19.98■□□□□ 0.79
Ccdc88c-202ENSMUST00000085096 Phldb1Q6PDH0 1371 aaKnown RBP19.96■□□□□ 0.79
Ccdc88c-202ENSMUST00000085096 Aebp1Q640N1 1128 aa19.96■□□□□ 0.79
Ccdc88c-202ENSMUST00000085096 Rtn4Q99P72 1162 aaKnown RBP19.95■□□□□ 0.78
Ccdc88c-202ENSMUST00000085096 CftrP26361 1476 aa19.94■□□□□ 0.78
Ccdc88c-202ENSMUST00000085096 Fmn1Q05860 1466 aa19.93■□□□□ 0.78
Ccdc88c-202ENSMUST00000085096 Ubap1lG3UW59 384 aa19.93■□□□□ 0.78
Ccdc88c-202ENSMUST00000085096 Mrs2Q5NCE8 434 aa19.93■□□□□ 0.78
Ccdc88c-202ENSMUST00000085096 Sox12Q04890 314 aa19.92■□□□□ 0.78
Ccdc88c-202ENSMUST00000085096 Aebp2Q9Z248 504 aaKnown RBP19.91■□□□□ 0.78
Ccdc88c-202ENSMUST00000085096 Card11Q8CIS0 1159 aa19.91■□□□□ 0.78
Ccdc88c-202ENSMUST00000085096 Plin1Q8CGN5 517 aa19.91■□□□□ 0.78
Ccdc88c-202ENSMUST00000085096 Ggt6Q6PDE7 497 aa19.9■□□□□ 0.78
Ccdc88c-202ENSMUST00000085096 Apbb1Q9QXJ1 710 aa19.88■□□□□ 0.77
Ccdc88c-202ENSMUST00000085096 Iqgap2Q3UQ44 1575 aa19.88■□□□□ 0.77
Ccdc88c-202ENSMUST00000085096 Znf316Q6PGE4 1016 aa19.86■□□□□ 0.77
Ccdc88c-202ENSMUST00000085096 Aplp2Q06335 707 aa19.86■□□□□ 0.77
Ccdc88c-202ENSMUST00000085096 Cc2d2aQ8CFW7 1633 aa19.86■□□□□ 0.77
Ccdc88c-202ENSMUST00000085096 Neurod2Q62414 383 aa19.86■□□□□ 0.77
Ccdc88c-202ENSMUST00000085096 Senp3Q9EP97 568 aaKnown RBP19.84■□□□□ 0.77
Ccdc88c-202ENSMUST00000085096 Atad2bE9Q166 1460 aaKnown RBP19.84■□□□□ 0.77
Ccdc88c-202ENSMUST00000085096 Hspa5P20029 655 aaKnown RBP19.83■□□□□ 0.76
Ccdc88c-202ENSMUST00000085096 Cep162Q6ZQ06 1403 aa19.81■□□□□ 0.76
Ccdc88c-202ENSMUST00000085096 Psme1P97371 249 aa19.81■□□□□ 0.76
Ccdc88c-202ENSMUST00000085096 Smarca2Q6DIC0 1577 aa19.8■□□□□ 0.76
Ccdc88c-202ENSMUST00000085096 1700019A02RikA0A087WPV9 146 aa19.8■□□□□ 0.76
Ccdc88c-202ENSMUST00000085096 Map4P27546 1125 aaKnown RBP19.8■□□□□ 0.76
Ccdc88c-202ENSMUST00000085096 Pabpn1Q8CCS6 302 aaKnown RBP19.78■□□□□ 0.76
Ccdc88c-202ENSMUST00000085096 Cabp1Q9JLK7 227 aa19.78■□□□□ 0.76
Ccdc88c-202ENSMUST00000085096 Fgd1P52734 960 aa19.78■□□□□ 0.76
Ccdc88c-202ENSMUST00000085096 Txndc2Q6P902 515 aa19.77■□□□□ 0.76
Ccdc88c-202ENSMUST00000085096 Cttnbp2B9EJA2 1648 aa19.77■□□□□ 0.75
Ccdc88c-202ENSMUST00000085096 Ifit1bl1D3Z6F0 470 aa19.76■□□□□ 0.75
Ccdc88c-202ENSMUST00000085096 Ythdc1E9Q5K9 736 aaKnown RBP19.75■□□□□ 0.75
Ccdc88c-202ENSMUST00000085096 Lemd3Q9WU40 921 aa19.75■□□□□ 0.75
Ccdc88c-202ENSMUST00000085096 Rapgef2Q8CHG7 1496 aa19.75■□□□□ 0.75
Ccdc88c-202ENSMUST00000085096 Q8BT18 775 aa19.75■□□□□ 0.75
Ccdc88c-202ENSMUST00000085096 Kif3bQ61771 747 aa19.74■□□□□ 0.75
Ccdc88c-202ENSMUST00000085096 Trak1Q6PD31 939 aa19.73■□□□□ 0.75
Ccdc88c-202ENSMUST00000085096 Dhx29Q6PGC1 1365 aaKnown RBP19.68■□□□□ 0.74
Ccdc88c-202ENSMUST00000085096 Ppp4r2Q0VGB7 417 aa19.66■□□□□ 0.74
Ccdc88c-202ENSMUST00000085096 Gm6268A2A3U9 297 aa19.65■□□□□ 0.74
Ccdc88c-202ENSMUST00000085096 Pkd2O35245 966 aa19.64■□□□□ 0.74
Ccdc88c-202ENSMUST00000085096 Shroom4Q1W617 1475 aa19.64■□□□□ 0.74
Ccdc88c-202ENSMUST00000085096 Pip4k2bQ80XI4 416 aa19.64■□□□□ 0.73
Ccdc88c-202ENSMUST00000085096 Armcx1Q9CX83 456 aa19.64■□□□□ 0.73
Ccdc88c-202ENSMUST00000085096 Clstn1Q9EPL2 979 aa19.62■□□□□ 0.73
Ccdc88c-202ENSMUST00000085096 Sin3aQ60520 1274 aaKnown RBP19.62■□□□□ 0.73
Ccdc88c-202ENSMUST00000085096 LrpprcQ6PB66 1392 aaKnown RBP19.62■□□□□ 0.73
Ccdc88c-202ENSMUST00000085096 Rundc1Q0VDN7 615 aa19.61■□□□□ 0.73
Ccdc88c-202ENSMUST00000085096 Vsig10D3YX43 558 aa19.6■□□□□ 0.73
Ccdc88c-202ENSMUST00000085096 Rad54l2Q99NG0 1466 aa19.6■□□□□ 0.73
Ccdc88c-202ENSMUST00000085096 WrnO09053 1401 aa19.59■□□□□ 0.73
Ccdc88c-202ENSMUST00000085096 Dnajc5bQ9CQ94 199 aa19.58■□□□□ 0.72
Ccdc88c-202ENSMUST00000085096 Soga1E1U8D0 1418 aa19.57■□□□□ 0.72
Ccdc88c-202ENSMUST00000085096 Sart1Q9Z315 806 aaKnown RBP19.56■□□□□ 0.72
Ccdc88c-202ENSMUST00000085096 Urb2E9Q7L1 1524 aaKnown RBP19.56■□□□□ 0.72
Ccdc88c-202ENSMUST00000085096 Calr4Q3TQS0 420 aa19.55■□□□□ 0.72
Ccdc88c-202ENSMUST00000085096 Tnnt1O88346 262 aa19.55■□□□□ 0.72
Ccdc88c-202ENSMUST00000085096 Birc3O08863 600 aa19.54■□□□□ 0.72
Ccdc88c-202ENSMUST00000085096 Mphosph9A6H5Y1 991 aa19.54■□□□□ 0.72
Ccdc88c-202ENSMUST00000085096 DaxxO35613 739 aa19.54■□□□□ 0.72
Ccdc88c-202ENSMUST00000085096 Mapk8ip3Q9ESN9 1337 aa19.52■□□□□ 0.72
Ccdc88c-202ENSMUST00000085096 Ccnb3Q810T2 1396 aa19.51■□□□□ 0.71
Ccdc88c-202ENSMUST00000085096 Bcl11bQ99PV8 884 aa19.51■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms