RNA–Protein interactions for RNA: ENSMUST00000073961.7

Ptpre-201, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-201ENSMUST00000073961 Hsp90aa1P07901 733 aaKnown RBP23.28■■□□□ 1.32
Ptpre-201ENSMUST00000073961 Golga3P55937 1487 aa23.21■■□□□ 1.31
Ptpre-201ENSMUST00000073961 Aebp2Q9Z248 504 aaKnown RBP23.2■■□□□ 1.3
Ptpre-201ENSMUST00000073961 Baz1aO88379 1555 aa23.16■■□□□ 1.3
Ptpre-201ENSMUST00000073961 1700123L14RikQ3V2K7 440 aa23.16■■□□□ 1.3
Ptpre-201ENSMUST00000073961 NacadQ5SWP3 1504 aa23.16■■□□□ 1.3
Ptpre-201ENSMUST00000073961 Rangap1P46061 589 aaKnown RBP23.16■■□□□ 1.3
Ptpre-201ENSMUST00000073961 Fam71e1A1L3C1 212 aa23.06■■□□□ 1.28
Ptpre-201ENSMUST00000073961 Rgl3Q3UYI5 709 aa23.06■■□□□ 1.28
Ptpre-201ENSMUST00000073961 CanxP35564 591 aaKnown RBP23.06■■□□□ 1.28
Ptpre-201ENSMUST00000073961 Ofd1Q80Z25 1017 aa23.06■■□□□ 1.28
Ptpre-201ENSMUST00000073961 Eea1Q8BL66 1411 aa23.05■■□□□ 1.28
Ptpre-201ENSMUST00000073961 DekQ7TNV0 380 aaKnown RBP23.05■■□□□ 1.28
Ptpre-201ENSMUST00000073961 Hsp90ab1P11499 724 aaKnown RBP23.03■■□□□ 1.28
Ptpre-201ENSMUST00000073961 Fgd1P52734 960 aa22.99■■□□□ 1.27
Ptpre-201ENSMUST00000073961 Rsf1E9PWW9 1441 aaKnown RBP22.97■■□□□ 1.27
Ptpre-201ENSMUST00000073961 Trim30dE9PWL0 497 aa22.97■■□□□ 1.27
Ptpre-201ENSMUST00000073961 CatipB9EKE5 520 aa22.96■■□□□ 1.27
Ptpre-201ENSMUST00000073961 Trim44Q9QXA7 346 aa22.95■■□□□ 1.26
Ptpre-201ENSMUST00000073961 Cwc22Q8C5N3 908 aaKnown RBP22.92■■□□□ 1.26
Ptpre-201ENSMUST00000073961 Kif15Q6P9L6 1387 aa22.92■■□□□ 1.26
Ptpre-201ENSMUST00000073961 Trim26Q99PN3 545 aa22.91■■□□□ 1.26
Ptpre-201ENSMUST00000073961 P3h3Q8CG70 732 aa22.9■■□□□ 1.26
Ptpre-201ENSMUST00000073961 Vsig10D3YX43 558 aa22.88■■□□□ 1.25
Ptpre-201ENSMUST00000073961 Ccdc27Q3V036 639 aa22.88■■□□□ 1.25
Ptpre-201ENSMUST00000073961 Card11Q8CIS0 1159 aa22.87■■□□□ 1.25
Ptpre-201ENSMUST00000073961 Ccdc18Q640L5 1455 aa22.86■■□□□ 1.25
Ptpre-201ENSMUST00000073961 Mia2Q91ZV0 1396 aa22.83■■□□□ 1.25
Ptpre-201ENSMUST00000073961 Htatsf1Q8BGC0 757 aa22.82■■□□□ 1.24
Ptpre-201ENSMUST00000073961 Grwd1Q810D6 446 aaKnown RBP22.81■■□□□ 1.24
Ptpre-201ENSMUST00000073961 Ppm1gQ61074 542 aa22.77■■□□□ 1.24
Ptpre-201ENSMUST00000073961 IqubQ8CDK3 788 aa22.77■■□□□ 1.24
Ptpre-201ENSMUST00000073961 Lmod3E9QA62 571 aa22.76■■□□□ 1.23
Ptpre-201ENSMUST00000073961 Plppr3Q7TPB0 716 aa22.76■■□□□ 1.23
Ptpre-201ENSMUST00000073961 Ythdc1E9Q5K9 736 aaKnown RBP22.75■■□□□ 1.23
Ptpre-201ENSMUST00000073961 Srpk2O54781 681 aaKnown RBP22.73■■□□□ 1.23
Ptpre-201ENSMUST00000073961 PtmaP26350 111 aa22.72■■□□□ 1.23
Ptpre-201ENSMUST00000073961 Kdm2aP59997 1161 aa22.72■■□□□ 1.23
Ptpre-201ENSMUST00000073961 Mtus2Q3UHD3 1353 aa22.72■■□□□ 1.23
Ptpre-201ENSMUST00000073961 Mroh3A0A1D5RM54 893 aa22.72■■□□□ 1.23
Ptpre-201ENSMUST00000073961 Ercc6F8VPZ5 1481 aa22.71■■□□□ 1.23
Ptpre-201ENSMUST00000073961 Apbb1Q9QXJ1 710 aa22.71■■□□□ 1.23
Ptpre-201ENSMUST00000073961 Plcb2A3KGF7 1181 aa22.68■■□□□ 1.22
Ptpre-201ENSMUST00000073961 Safb2Q80YR5 991 aaKnown RBP22.66■■□□□ 1.22
Ptpre-201ENSMUST00000073961 Gm20521D3Z5F7 333 aa22.66■■□□□ 1.22
Ptpre-201ENSMUST00000073961 Neurod2Q62414 383 aa22.65■■□□□ 1.22
Ptpre-201ENSMUST00000073961 Mapk8ip3Q9ESN9 1337 aa22.65■■□□□ 1.22
Ptpre-201ENSMUST00000073961 Arid4bA2CG63 1314 aaKnown RBP22.64■■□□□ 1.22
Ptpre-201ENSMUST00000073961 Mbd3Q9Z2D8 285 aaKnown RBP22.63■■□□□ 1.21
Ptpre-201ENSMUST00000073961 Arhgap27A2AB59 869 aa22.63■■□□□ 1.21
Ptpre-201ENSMUST00000073961 Map7O88735 730 aa22.62■■□□□ 1.21
Ptpre-201ENSMUST00000073961 Chmp4bQ9D8B3 224 aaKnown RBP22.62■■□□□ 1.21
Ptpre-201ENSMUST00000073961 Exosc9Q9JHI7 438 aaKnown RBP22.61■■□□□ 1.21
Ptpre-201ENSMUST00000073961 SafbD3YXK2 937 aaKnown RBP22.6■■□□□ 1.21
Ptpre-201ENSMUST00000073961 Hspa5P20029 655 aaKnown RBP22.57■■□□□ 1.2
Ptpre-201ENSMUST00000073961 Rrp7aQ9D1C9 280 aaKnown RBP22.56■■□□□ 1.2
Ptpre-201ENSMUST00000073961 Dbr1Q923B1 550 aa22.56■■□□□ 1.2
Ptpre-201ENSMUST00000073961 Kdm5dQ62240 1548 aa22.54■■□□□ 1.2
Ptpre-201ENSMUST00000073961 NudcO35685 332 aaKnown RBP22.52■■□□□ 1.2
Ptpre-201ENSMUST00000073961 Cep162Q6ZQ06 1403 aa22.5■■□□□ 1.19
Ptpre-201ENSMUST00000073961 Tcerg1Q8CGF7 1100 aaKnown RBP22.5■■□□□ 1.19
Ptpre-201ENSMUST00000073961 B4galnt3Q6L8S8 986 aa22.5■■□□□ 1.19
Ptpre-201ENSMUST00000073961 Wwc2Q6NXJ0 1187 aa22.49■■□□□ 1.19
Ptpre-201ENSMUST00000073961 Irx6Q9ER75 438 aa22.49■■□□□ 1.19
Ptpre-201ENSMUST00000073961 Rwdd1Q9CQK7 243 aa22.49■■□□□ 1.19
Ptpre-201ENSMUST00000073961 Gm6268A2A3U9 297 aa22.46■■□□□ 1.19
Ptpre-201ENSMUST00000073961 Stag3O70576 1240 aa22.46■■□□□ 1.19
Ptpre-201ENSMUST00000073961 Irx3P81067 507 aa22.46■■□□□ 1.19
Ptpre-201ENSMUST00000073961 Ccdc88bQ4QRL3 1481 aa22.45■■□□□ 1.18
Ptpre-201ENSMUST00000073961 Fmn1Q05860 1466 aa22.44■■□□□ 1.18
Ptpre-201ENSMUST00000073961 Iqcf3Q9D498 203 aa22.44■■□□□ 1.18
Ptpre-201ENSMUST00000073961 Armcx1Q9CX83 456 aa22.44■■□□□ 1.18
Ptpre-201ENSMUST00000073961 Bcl11aQ9QYE3 773 aa22.44■■□□□ 1.18
Ptpre-201ENSMUST00000073961 KnstrnQ9D9Z1 312 aaKnown RBP22.42■■□□□ 1.18
Ptpre-201ENSMUST00000073961 Stk24Q99KH8 431 aa22.41■■□□□ 1.18
Ptpre-201ENSMUST00000073961 Zfp777B9EKF4 885 aa22.41■■□□□ 1.18
Ptpre-201ENSMUST00000073961 Supt16hQ920B9 1047 aa22.4■■□□□ 1.18
Ptpre-201ENSMUST00000073961 Fhad1A6PWD2 1420 aa22.4■■□□□ 1.18
Ptpre-201ENSMUST00000073961 Pkd2O35245 966 aa22.4■■□□□ 1.18
Ptpre-201ENSMUST00000073961 Slc4a3P16283 1227 aa22.39■■□□□ 1.17
Ptpre-201ENSMUST00000073961 Rundc1Q0VDN7 615 aa22.38■■□□□ 1.17
Ptpre-201ENSMUST00000073961 Casc1Q6TDU8 730 aa22.38■■□□□ 1.17
Ptpre-201ENSMUST00000073961 Kif27Q7M6Z4 1394 aa22.37■■□□□ 1.17
Ptpre-201ENSMUST00000073961 Fyco1Q8VDC1 1437 aa22.37■■□□□ 1.17
Ptpre-201ENSMUST00000073961 Exoc6Q8R313 802 aa22.36■■□□□ 1.17
Ptpre-201ENSMUST00000073961 Adam1bQ8R534 806 aa22.35■■□□□ 1.17
Ptpre-201ENSMUST00000073961 Arhgap35Q91YM2 1499 aa22.35■■□□□ 1.17
Ptpre-201ENSMUST00000073961 Spryd3E9Q9B3 442 aa22.33■■□□□ 1.17
Ptpre-201ENSMUST00000073961 Map4P27546 1125 aaKnown RBP22.32■■□□□ 1.16
Ptpre-201ENSMUST00000073961 Chmp5Q9D7S9 219 aa22.31■■□□□ 1.16
Ptpre-201ENSMUST00000073961 Dnai1Q8C0M8 701 aa22.3■■□□□ 1.16
Ptpre-201ENSMUST00000073961 EspnQ9ET47 871 aa22.3■■□□□ 1.16
Ptpre-201ENSMUST00000073961 Baz1bQ9Z277 1479 aa22.3■■□□□ 1.16
Ptpre-201ENSMUST00000073961 Hsp90b1P08113 802 aaKnown RBP22.29■■□□□ 1.16
Ptpre-201ENSMUST00000073961 Ipo9Q91YE6 1041 aa22.29■■□□□ 1.16
Ptpre-201ENSMUST00000073961 AU015836B2RUM3 263 aa22.29■■□□□ 1.16
Ptpre-201ENSMUST00000073961 Cnga1P29974 684 aa22.29■■□□□ 1.16
Ptpre-201ENSMUST00000073961 HnrnpuQ8VEK3 800 aaKnown RBP22.29■■□□□ 1.16
Ptpre-201ENSMUST00000073961 MccE9PWI3 1003 aa22.28■■□□□ 1.16
Ptpre-201ENSMUST00000073961 Zscan21Q07231 555 aa22.28■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms