RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Golga3P55937 1487 aa19.55■□□□□ 0.72
Pcdh20-201ENSMUST00000061628 Gm38655A0A286YDK6 273 aa19.53■□□□□ 0.72
Pcdh20-201ENSMUST00000061628 Rsf1E9PWW9 1441 aaKnown RBP19.52■□□□□ 0.72
Pcdh20-201ENSMUST00000061628 Baz1aO88379 1555 aa19.46■□□□□ 0.71
Pcdh20-201ENSMUST00000061628 Eea1Q8BL66 1411 aa19.46■□□□□ 0.71
Pcdh20-201ENSMUST00000061628 Fgd1P52734 960 aa19.45■□□□□ 0.7
Pcdh20-201ENSMUST00000061628 Hsp90aa1P07901 733 aaKnown RBP19.44■□□□□ 0.7
Pcdh20-201ENSMUST00000061628 Cwc22Q8C5N3 908 aaKnown RBP19.41■□□□□ 0.7
Pcdh20-201ENSMUST00000061628 Kif15Q6P9L6 1387 aa19.41■□□□□ 0.7
Pcdh20-201ENSMUST00000061628 Ccdc18Q640L5 1455 aa19.4■□□□□ 0.7
Pcdh20-201ENSMUST00000061628 Rgl3Q3UYI5 709 aa19.4■□□□□ 0.7
Pcdh20-201ENSMUST00000061628 Safb2Q80YR5 991 aaKnown RBP19.36■□□□□ 0.69
Pcdh20-201ENSMUST00000061628 Rangap1P46061 589 aaKnown RBP19.35■□□□□ 0.69
Pcdh20-201ENSMUST00000061628 IqubQ8CDK3 788 aa19.35■□□□□ 0.69
Pcdh20-201ENSMUST00000061628 Ofd1Q80Z25 1017 aa19.34■□□□□ 0.69
Pcdh20-201ENSMUST00000061628 Ercc6F8VPZ5 1481 aa19.31■□□□□ 0.68
Pcdh20-201ENSMUST00000061628 Mia2Q91ZV0 1396 aa19.31■□□□□ 0.68
Pcdh20-201ENSMUST00000061628 Hsp90ab1P11499 724 aaKnown RBP19.3■□□□□ 0.68
Pcdh20-201ENSMUST00000061628 CanxP35564 591 aaKnown RBP19.3■□□□□ 0.68
Pcdh20-201ENSMUST00000061628 DekQ7TNV0 380 aaKnown RBP19.3■□□□□ 0.68
Pcdh20-201ENSMUST00000061628 CatipB9EKE5 520 aa19.29■□□□□ 0.68
Pcdh20-201ENSMUST00000061628 Plppr3Q7TPB0 716 aa19.28■□□□□ 0.68
Pcdh20-201ENSMUST00000061628 Card11Q8CIS0 1159 aa19.27■□□□□ 0.68
Pcdh20-201ENSMUST00000061628 Trim44Q9QXA7 346 aa19.27■□□□□ 0.68
Pcdh20-201ENSMUST00000061628 Zfp777B9EKF4 885 aa19.27■□□□□ 0.68
Pcdh20-201ENSMUST00000061628 Trim30dE9PWL0 497 aa19.26■□□□□ 0.67
Pcdh20-201ENSMUST00000061628 Chmp4bQ9D8B3 224 aaKnown RBP19.26■□□□□ 0.67
Pcdh20-201ENSMUST00000061628 Srpk2O54781 681 aaKnown RBP19.25■□□□□ 0.67
Pcdh20-201ENSMUST00000061628 Mroh3A0A1D5RM54 893 aa19.23■□□□□ 0.67
Pcdh20-201ENSMUST00000061628 Htatsf1Q8BGC0 757 aa19.23■□□□□ 0.67
Pcdh20-201ENSMUST00000061628 Mtus2Q3UHD3 1353 aa19.22■□□□□ 0.67
Pcdh20-201ENSMUST00000061628 P3h3Q8CG70 732 aa19.22■□□□□ 0.67
Pcdh20-201ENSMUST00000061628 Aebp2Q9Z248 504 aaKnown RBP19.2■□□□□ 0.66
Pcdh20-201ENSMUST00000061628 Trim26Q99PN3 545 aa19.18■□□□□ 0.66
Pcdh20-201ENSMUST00000061628 Ppm1gQ61074 542 aa19.17■□□□□ 0.66
Pcdh20-201ENSMUST00000061628 Mapk8ip3Q9ESN9 1337 aa19.17■□□□□ 0.66
Pcdh20-201ENSMUST00000061628 Gm20521D3Z5F7 333 aa19.17■□□□□ 0.66
Pcdh20-201ENSMUST00000061628 Grwd1Q810D6 446 aaKnown RBP19.16■□□□□ 0.66
Pcdh20-201ENSMUST00000061628 Kdm2aP59997 1161 aa19.15■□□□□ 0.66
Pcdh20-201ENSMUST00000061628 Exosc9Q9JHI7 438 aaKnown RBP19.15■□□□□ 0.66
Pcdh20-201ENSMUST00000061628 Arhgap27A2AB59 869 aa19.15■□□□□ 0.66
Pcdh20-201ENSMUST00000061628 Mbd3Q9Z2D8 285 aaKnown RBP19.12■□□□□ 0.65
Pcdh20-201ENSMUST00000061628 NudcO35685 332 aaKnown RBP19.12■□□□□ 0.65
Pcdh20-201ENSMUST00000061628 Map7O88735 730 aa19.11■□□□□ 0.65
Pcdh20-201ENSMUST00000061628 Iqcf3Q9D498 203 aa19.11■□□□□ 0.65
Pcdh20-201ENSMUST00000061628 Ccdc27Q3V036 639 aa19.1■□□□□ 0.65
Pcdh20-201ENSMUST00000061628 Rrp7aQ9D1C9 280 aaKnown RBP19.08■□□□□ 0.64
Pcdh20-201ENSMUST00000061628 Vsig10D3YX43 558 aa19.07■□□□□ 0.64
Pcdh20-201ENSMUST00000061628 PtmaP26350 111 aa19.06■□□□□ 0.64
Pcdh20-201ENSMUST00000061628 1700123L14RikQ3V2K7 440 aa19.04■□□□□ 0.64
Pcdh20-201ENSMUST00000061628 Fam71e1A1L3C1 212 aa19.01■□□□□ 0.63
Pcdh20-201ENSMUST00000061628 Plcb2A3KGF7 1181 aa19■□□□□ 0.63
Pcdh20-201ENSMUST00000061628 Ythdc1E9Q5K9 736 aaKnown RBP18.99■□□□□ 0.63
Pcdh20-201ENSMUST00000061628 Stag3O70576 1240 aa18.98■□□□□ 0.63
Pcdh20-201ENSMUST00000061628 Neurod2Q62414 383 aa18.98■□□□□ 0.63
Pcdh20-201ENSMUST00000061628 Arid4bA2CG63 1314 aaKnown RBP18.97■□□□□ 0.63
Pcdh20-201ENSMUST00000061628 Lmod3E9QA62 571 aa18.96■□□□□ 0.63
Pcdh20-201ENSMUST00000061628 Znf326O88291 580 aa18.95■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 Apbb1Q9QXJ1 710 aa18.95■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 KnstrnQ9D9Z1 312 aaKnown RBP18.94■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 Kif27Q7M6Z4 1394 aa18.93■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 Fmn1Q05860 1466 aa18.93■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 Rwdd1Q9CQK7 243 aa18.93■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 Fhad1A6PWD2 1420 aa18.93■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 Stk24Q99KH8 431 aa18.91■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 Kdm5dQ62240 1548 aa18.91■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 Irx6Q9ER75 438 aa18.91■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 HnrnpuQ8VEK3 800 aaKnown RBP18.91■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 Gm6268A2A3U9 297 aa18.9■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 Adam1bQ8R534 806 aa18.9■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 Cep162Q6ZQ06 1403 aa18.9■□□□□ 0.62
Pcdh20-201ENSMUST00000061628 Pds5bQ4VA53 1446 aaKnown RBP18.89■□□□□ 0.61
Pcdh20-201ENSMUST00000061628 Fyco1Q8VDC1 1437 aa18.88■□□□□ 0.61
Pcdh20-201ENSMUST00000061628 Casc1Q6TDU8 730 aa18.88■□□□□ 0.61
Pcdh20-201ENSMUST00000061628 Map4P27546 1125 aaKnown RBP18.88■□□□□ 0.61
Pcdh20-201ENSMUST00000061628 PnnO35691 725 aaKnown RBP18.87■□□□□ 0.61
Pcdh20-201ENSMUST00000061628 Hspa5P20029 655 aaKnown RBP18.87■□□□□ 0.61
Pcdh20-201ENSMUST00000061628 Tcerg1Q8CGF7 1100 aaKnown RBP18.87■□□□□ 0.61
Pcdh20-201ENSMUST00000061628 PtmsQ9D0J8 101 aaKnown RBP18.87■□□□□ 0.61
Pcdh20-201ENSMUST00000061628 Pkd2O35245 966 aa18.86■□□□□ 0.61
Pcdh20-201ENSMUST00000061628 MccE9PWI3 1003 aa18.86■□□□□ 0.61
Pcdh20-201ENSMUST00000061628 Pes1Q9EQ61 584 aaKnown RBP18.83■□□□□ 0.61
Pcdh20-201ENSMUST00000061628 Pde3bQ61409 1100 aa18.81■□□□□ 0.6
Pcdh20-201ENSMUST00000061628 Hsp90b1P08113 802 aaKnown RBP18.81■□□□□ 0.6
Pcdh20-201ENSMUST00000061628 Rundc1Q0VDN7 615 aa18.8■□□□□ 0.6
Pcdh20-201ENSMUST00000061628 CntlnA2AM05 1397 aa18.8■□□□□ 0.6
Pcdh20-201ENSMUST00000061628 Tmf1B9EKI3 1091 aa18.79■□□□□ 0.6
Pcdh20-201ENSMUST00000061628 Wwc2Q6NXJ0 1187 aa18.79■□□□□ 0.6
Pcdh20-201ENSMUST00000061628 Aebp1Q640N1 1128 aa18.79■□□□□ 0.6
Pcdh20-201ENSMUST00000061628 Arhgap35Q91YM2 1499 aa18.78■□□□□ 0.6
Pcdh20-201ENSMUST00000061628 Dbr1Q923B1 550 aa18.78■□□□□ 0.6
Pcdh20-201ENSMUST00000061628 Gtf2e1Q9D0D5 440 aa18.78■□□□□ 0.6
Pcdh20-201ENSMUST00000061628 Zscan21Q07231 555 aa18.77■□□□□ 0.6
Pcdh20-201ENSMUST00000061628 Sart3Q9JLI8 962 aaKnown RBP18.75■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 Dhx57Q6P5D3 1388 aaKnown RBP18.74■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 Eif4g2Q62448 906 aaKnown RBP18.74■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 Mak16Q8BGS0 296 aaKnown RBP18.74■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 Chmp5Q9D7S9 219 aa18.74■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 B4galnt3Q6L8S8 986 aa18.73■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 NgefQ8CHT1 710 aa18.73■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 128.5 ms