RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Trim26Q99PN3 545 aa23.09■■□□□ 1.29
Usp48-201ENSMUST00000055131 Clstn2Q9ER65 966 aa23.05■■□□□ 1.28
Usp48-201ENSMUST00000055131 Vsig10D3YX43 558 aa23.05■■□□□ 1.28
Usp48-201ENSMUST00000055131 Rgl3Q3UYI5 709 aa23.04■■□□□ 1.28
Usp48-201ENSMUST00000055131 DekQ7TNV0 380 aaKnown RBP23.04■■□□□ 1.28
Usp48-201ENSMUST00000055131 Setd5Q5XJV7 1441 aa23.03■■□□□ 1.28
Usp48-201ENSMUST00000055131 P3h3Q8CG70 732 aa23■■□□□ 1.27
Usp48-201ENSMUST00000055131 Fgd1P52734 960 aa23■■□□□ 1.27
Usp48-201ENSMUST00000055131 CatipB9EKE5 520 aa22.97■■□□□ 1.27
Usp48-201ENSMUST00000055131 Ythdc1E9Q5K9 736 aaKnown RBP22.97■■□□□ 1.27
Usp48-201ENSMUST00000055131 Aebp2Q9Z248 504 aaKnown RBP22.96■■□□□ 1.27
Usp48-201ENSMUST00000055131 Safb2Q80YR5 991 aaKnown RBP22.95■■□□□ 1.26
Usp48-201ENSMUST00000055131 Hsp90aa1P07901 733 aaKnown RBP22.93■■□□□ 1.26
Usp48-201ENSMUST00000055131 Kif15Q6P9L6 1387 aa22.88■■□□□ 1.25
Usp48-201ENSMUST00000055131 Lmod3E9QA62 571 aa22.86■■□□□ 1.25
Usp48-201ENSMUST00000055131 Hsp90ab1P11499 724 aaKnown RBP22.86■■□□□ 1.25
Usp48-201ENSMUST00000055131 CanxP35564 591 aaKnown RBP22.86■■□□□ 1.25
Usp48-201ENSMUST00000055131 Trim30dE9PWL0 497 aa22.86■■□□□ 1.25
Usp48-201ENSMUST00000055131 Ofd1Q80Z25 1017 aa22.85■■□□□ 1.25
Usp48-201ENSMUST00000055131 Irx6Q9ER75 438 aa22.85■■□□□ 1.25
Usp48-201ENSMUST00000055131 Grwd1Q810D6 446 aaKnown RBP22.84■■□□□ 1.25
Usp48-201ENSMUST00000055131 Kdm2aP59997 1161 aa22.82■■□□□ 1.24
Usp48-201ENSMUST00000055131 Arid4bA2CG63 1314 aaKnown RBP22.81■■□□□ 1.24
Usp48-201ENSMUST00000055131 Apbb1Q9QXJ1 710 aa22.79■■□□□ 1.24
Usp48-201ENSMUST00000055131 Fam71e1A1L3C1 212 aa22.75■■□□□ 1.23
Usp48-201ENSMUST00000055131 Ercc6F8VPZ5 1481 aa22.74■■□□□ 1.23
Usp48-201ENSMUST00000055131 1700123L14RikQ3V2K7 440 aa22.71■■□□□ 1.23
Usp48-201ENSMUST00000055131 Trim44Q9QXA7 346 aa22.71■■□□□ 1.23
Usp48-201ENSMUST00000055131 Card11Q8CIS0 1159 aa22.71■■□□□ 1.23
Usp48-201ENSMUST00000055131 Rsf1E9PWW9 1441 aaKnown RBP22.7■■□□□ 1.22
Usp48-201ENSMUST00000055131 IqubQ8CDK3 788 aa22.7■■□□□ 1.22
Usp48-201ENSMUST00000055131 Neurod2Q62414 383 aa22.69■■□□□ 1.22
Usp48-201ENSMUST00000055131 Baz1aO88379 1555 aa22.68■■□□□ 1.22
Usp48-201ENSMUST00000055131 Srpk2O54781 681 aaKnown RBP22.68■■□□□ 1.22
Usp48-201ENSMUST00000055131 Arhgap27A2AB59 869 aa22.67■■□□□ 1.22
Usp48-201ENSMUST00000055131 Golga3P55937 1487 aa22.67■■□□□ 1.22
Usp48-201ENSMUST00000055131 Mroh3A0A1D5RM54 893 aa22.66■■□□□ 1.22
Usp48-201ENSMUST00000055131 Kdm5dQ62240 1548 aa22.65■■□□□ 1.22
Usp48-201ENSMUST00000055131 Eea1Q8BL66 1411 aa22.64■■□□□ 1.21
Usp48-201ENSMUST00000055131 Gm20521D3Z5F7 333 aa22.62■■□□□ 1.21
Usp48-201ENSMUST00000055131 Exosc9Q9JHI7 438 aaKnown RBP22.61■■□□□ 1.21
Usp48-201ENSMUST00000055131 Ccdc9Q8VC31 543 aaKnown RBP22.6■■□□□ 1.21
Usp48-201ENSMUST00000055131 PtmaP26350 111 aa22.6■■□□□ 1.21
Usp48-201ENSMUST00000055131 Plcb2A3KGF7 1181 aa22.57■■□□□ 1.2
Usp48-201ENSMUST00000055131 Dbr1Q923B1 550 aa22.56■■□□□ 1.2
Usp48-201ENSMUST00000055131 Rrp7aQ9D1C9 280 aaKnown RBP22.56■■□□□ 1.2
Usp48-201ENSMUST00000055131 Mapk8ip3Q9ESN9 1337 aa22.54■■□□□ 1.2
Usp48-201ENSMUST00000055131 Cwc22Q8C5N3 908 aaKnown RBP22.54■■□□□ 1.2
Usp48-201ENSMUST00000055131 Armcx1Q9CX83 456 aa22.53■■□□□ 1.2
Usp48-201ENSMUST00000055131 Stk24Q99KH8 431 aa22.52■■□□□ 1.19
Usp48-201ENSMUST00000055131 Gm6268A2A3U9 297 aa22.51■■□□□ 1.19
Usp48-201ENSMUST00000055131 Ccdc18Q640L5 1455 aa22.51■■□□□ 1.19
Usp48-201ENSMUST00000055131 NgefQ8CHT1 710 aa22.5■■□□□ 1.19
Usp48-201ENSMUST00000055131 Mtus2Q3UHD3 1353 aa22.49■■□□□ 1.19
Usp48-201ENSMUST00000055131 Stag3O70576 1240 aa22.46■■□□□ 1.19
Usp48-201ENSMUST00000055131 B4galnt3Q6L8S8 986 aa22.45■■□□□ 1.18
Usp48-201ENSMUST00000055131 Cnga1P29974 684 aa22.44■■□□□ 1.18
Usp48-201ENSMUST00000055131 Htatsf1Q8BGC0 757 aa22.44■■□□□ 1.18
Usp48-201ENSMUST00000055131 Rtn4Q99P72 1162 aaKnown RBP22.43■■□□□ 1.18
Usp48-201ENSMUST00000055131 SafbD3YXK2 937 aaKnown RBP22.43■■□□□ 1.18
Usp48-201ENSMUST00000055131 1700019A02RikA0A087WPV9 146 aa22.42■■□□□ 1.18
Usp48-201ENSMUST00000055131 Ccdc27Q3V036 639 aa22.42■■□□□ 1.18
Usp48-201ENSMUST00000055131 Hspa5P20029 655 aaKnown RBP22.4■■□□□ 1.18
Usp48-201ENSMUST00000055131 Znf326O88291 580 aa22.4■■□□□ 1.18
Usp48-201ENSMUST00000055131 Ppm1gQ61074 542 aa22.39■■□□□ 1.17
Usp48-201ENSMUST00000055131 Wwc2Q6NXJ0 1187 aa22.37■■□□□ 1.17
Usp48-201ENSMUST00000055131 Spryd3E9Q9B3 442 aa22.36■■□□□ 1.17
Usp48-201ENSMUST00000055131 Slc4a3P16283 1227 aa22.36■■□□□ 1.17
Usp48-201ENSMUST00000055131 Mia2Q91ZV0 1396 aa22.34■■□□□ 1.17
Usp48-201ENSMUST00000055131 Map7O88735 730 aa22.33■■□□□ 1.17
Usp48-201ENSMUST00000055131 MyclP10166 368 aa22.31■■□□□ 1.16
Usp48-201ENSMUST00000055131 NudcO35685 332 aaKnown RBP22.29■■□□□ 1.16
Usp48-201ENSMUST00000055131 Clstn1Q9EPL2 979 aa22.29■■□□□ 1.16
Usp48-201ENSMUST00000055131 Iqcf3Q9D498 203 aa22.28■■□□□ 1.16
Usp48-201ENSMUST00000055131 Chmp4bQ9D8B3 224 aaKnown RBP22.27■■□□□ 1.16
Usp48-201ENSMUST00000055131 Hsp90b1P08113 802 aaKnown RBP22.25■■□□□ 1.15
Usp48-201ENSMUST00000055131 Pes1Q9EQ61 584 aaKnown RBP22.24■■□□□ 1.15
Usp48-201ENSMUST00000055131 Rwdd1Q9CQK7 243 aa22.23■■□□□ 1.15
Usp48-201ENSMUST00000055131 Pds5bQ4VA53 1446 aaKnown RBP22.23■■□□□ 1.15
Usp48-201ENSMUST00000055131 Rundc1Q0VDN7 615 aa22.22■■□□□ 1.15
Usp48-201ENSMUST00000055131 Ecm2Q5FW85 670 aa22.21■■□□□ 1.15
Usp48-201ENSMUST00000055131 Casc1Q6TDU8 730 aa22.21■■□□□ 1.15
Usp48-201ENSMUST00000055131 PnnO35691 725 aaKnown RBP22.2■■□□□ 1.14
Usp48-201ENSMUST00000055131 Ppp1r18Q8BQ30 594 aa22.2■■□□□ 1.14
Usp48-201ENSMUST00000055131 Pkd2O35245 966 aa22.19■■□□□ 1.14
Usp48-201ENSMUST00000055131 Map4P27546 1125 aaKnown RBP22.18■■□□□ 1.14
Usp48-201ENSMUST00000055131 Sin3aQ60520 1274 aaKnown RBP22.18■■□□□ 1.14
Usp48-201ENSMUST00000055131 Arid3cA6PWV5 409 aa22.16■■□□□ 1.14
Usp48-201ENSMUST00000055131 Supt16hQ920B9 1047 aa22.15■■□□□ 1.14
Usp48-201ENSMUST00000055131 Speer4f1Q9D5Q6 258 aa22.15■■□□□ 1.14
Usp48-201ENSMUST00000055131 KnstrnQ9D9Z1 312 aaKnown RBP22.15■■□□□ 1.14
Usp48-201ENSMUST00000055131 Exoc6Q8R313 802 aa22.14■■□□□ 1.14
Usp48-201ENSMUST00000055131 Mbd3Q9Z2D8 285 aaKnown RBP22.13■■□□□ 1.13
Usp48-201ENSMUST00000055131 Plin1Q8CGN5 517 aa22.13■■□□□ 1.13
Usp48-201ENSMUST00000055131 Kif27Q7M6Z4 1394 aa22.13■■□□□ 1.13
Usp48-201ENSMUST00000055131 Ifit1bl1D3Z6F0 470 aa22.11■■□□□ 1.13
Usp48-201ENSMUST00000055131 U2surpQ6NV83 1029 aaKnown RBP22.11■■□□□ 1.13
Usp48-201ENSMUST00000055131 Fhad1A6PWD2 1420 aa22.11■■□□□ 1.13
Usp48-201ENSMUST00000055131 Sh3bp5Q9Z131 463 aa22.1■■□□□ 1.13
Usp48-201ENSMUST00000055131 Stk26Q99JT2 416 aa22.09■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms