RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Hsp90aa1P07901 733 aaKnown RBP24.74■■□□□ 1.55
Ebf3-201ENSMUST00000033378 Ifnlr1Q8CGK5 535 aa24.73■■□□□ 1.55
Ebf3-201ENSMUST00000033378 Ccdc9Q8VC31 543 aaKnown RBP24.68■■□□□ 1.54
Ebf3-201ENSMUST00000033378 Ofd1Q80Z25 1017 aa24.64■■□□□ 1.53
Ebf3-201ENSMUST00000033378 NacadQ5SWP3 1504 aa24.63■■□□□ 1.53
Ebf3-201ENSMUST00000033378 Atp1b4Q99ME6 356 aa24.62■■□□□ 1.53
Ebf3-201ENSMUST00000033378 Hdac5Q9Z2V6 1113 aa24.6■■□□□ 1.53
Ebf3-201ENSMUST00000033378 CanxP35564 591 aaKnown RBP24.59■■□□□ 1.53
Ebf3-201ENSMUST00000033378 Eea1Q8BL66 1411 aa24.58■■□□□ 1.53
Ebf3-201ENSMUST00000033378 Rangap1P46061 589 aaKnown RBP24.58■■□□□ 1.52
Ebf3-201ENSMUST00000033378 Rgl3Q3UYI5 709 aa24.57■■□□□ 1.52
Ebf3-201ENSMUST00000033378 Ubl4bQ9CQ84 188 aa24.57■■□□□ 1.52
Ebf3-201ENSMUST00000033378 Bcl11aQ9QYE3 773 aa24.55■■□□□ 1.52
Ebf3-201ENSMUST00000033378 Ccdc27Q3V036 639 aa24.51■■□□□ 1.51
Ebf3-201ENSMUST00000033378 Gm13697A2AK42 830 aa24.49■■□□□ 1.51
Ebf3-201ENSMUST00000033378 Ccdc88bQ4QRL3 1481 aa24.45■■□□□ 1.5
Ebf3-201ENSMUST00000033378 Trim30dE9PWL0 497 aa24.44■■□□□ 1.5
Ebf3-201ENSMUST00000033378 Hspa5P20029 655 aaKnown RBP24.41■■□□□ 1.5
Ebf3-201ENSMUST00000033378 Clstn2Q9ER65 966 aa24.4■■□□□ 1.5
Ebf3-201ENSMUST00000033378 Hsp90ab1P11499 724 aaKnown RBP24.37■■□□□ 1.49
Ebf3-201ENSMUST00000033378 Grwd1Q810D6 446 aaKnown RBP24.37■■□□□ 1.49
Ebf3-201ENSMUST00000033378 Wwc2Q6NXJ0 1187 aa24.35■■□□□ 1.49
Ebf3-201ENSMUST00000033378 Slc4a3P16283 1227 aa24.32■■□□□ 1.48
Ebf3-201ENSMUST00000033378 Kif15Q6P9L6 1387 aa24.32■■□□□ 1.48
Ebf3-201ENSMUST00000033378 DekQ7TNV0 380 aaKnown RBP24.32■■□□□ 1.48
Ebf3-201ENSMUST00000033378 Trim26Q99PN3 545 aa24.3■■□□□ 1.48
Ebf3-201ENSMUST00000033378 Card11Q8CIS0 1159 aa24.3■■□□□ 1.48
Ebf3-201ENSMUST00000033378 Cwc22Q8C5N3 908 aaKnown RBP24.29■■□□□ 1.48
Ebf3-201ENSMUST00000033378 Vsig10D3YX43 558 aa24.28■■□□□ 1.48
Ebf3-201ENSMUST00000033378 Apbb1Q9QXJ1 710 aa24.28■■□□□ 1.48
Ebf3-201ENSMUST00000033378 Cep162Q6ZQ06 1403 aa24.24■■□□□ 1.47
Ebf3-201ENSMUST00000033378 Mia2Q91ZV0 1396 aa24.22■■□□□ 1.47
Ebf3-201ENSMUST00000033378 Sin3aQ60520 1274 aaKnown RBP24.21■■□□□ 1.47
Ebf3-201ENSMUST00000033378 Kdm5dQ62240 1548 aa24.2■■□□□ 1.46
Ebf3-201ENSMUST00000033378 Supt16hQ920B9 1047 aa24.2■■□□□ 1.46
Ebf3-201ENSMUST00000033378 Gm13695A2AK44 830 aa24.19■■□□□ 1.46
Ebf3-201ENSMUST00000033378 Trim44Q9QXA7 346 aa24.19■■□□□ 1.46
Ebf3-201ENSMUST00000033378 Dbr1Q923B1 550 aa24.18■■□□□ 1.46
Ebf3-201ENSMUST00000033378 Ppm1gQ61074 542 aa24.16■■□□□ 1.46
Ebf3-201ENSMUST00000033378 B4galnt3Q6L8S8 986 aa24.14■■□□□ 1.45
Ebf3-201ENSMUST00000033378 Tcerg1Q8CGF7 1100 aaKnown RBP24.14■■□□□ 1.45
Ebf3-201ENSMUST00000033378 Neurod2Q62414 383 aa24.14■■□□□ 1.45
Ebf3-201ENSMUST00000033378 Ythdc1E9Q5K9 736 aaKnown RBP24.13■■□□□ 1.45
Ebf3-201ENSMUST00000033378 Kdm2aP59997 1161 aa24.13■■□□□ 1.45
Ebf3-201ENSMUST00000033378 Irx3P81067 507 aa24.13■■□□□ 1.45
Ebf3-201ENSMUST00000033378 Arid4bA2CG63 1314 aaKnown RBP24.12■■□□□ 1.45
Ebf3-201ENSMUST00000033378 Htatsf1Q8BGC0 757 aa24.12■■□□□ 1.45
Ebf3-201ENSMUST00000033378 Exoc6Q8R313 802 aa24.08■■□□□ 1.45
Ebf3-201ENSMUST00000033378 Lmod3E9QA62 571 aa24.06■■□□□ 1.44
Ebf3-201ENSMUST00000033378 Ccdc18Q640L5 1455 aa24.04■■□□□ 1.44
Ebf3-201ENSMUST00000033378 Mroh3A0A1D5RM54 893 aa24.04■■□□□ 1.44
Ebf3-201ENSMUST00000033378 Plcb2A3KGF7 1181 aa24.03■■□□□ 1.44
Ebf3-201ENSMUST00000033378 Fgd1P52734 960 aa24.02■■□□□ 1.44
Ebf3-201ENSMUST00000033378 Nolc1E9Q5C9 702 aaKnown RBP24■■□□□ 1.43
Ebf3-201ENSMUST00000033378 Pkd2O35245 966 aa23.99■■□□□ 1.43
Ebf3-201ENSMUST00000033378 Mtus2Q3UHD3 1353 aa23.99■■□□□ 1.43
Ebf3-201ENSMUST00000033378 Spryd3E9Q9B3 442 aa23.98■■□□□ 1.43
Ebf3-201ENSMUST00000033378 Fmn1Q05860 1466 aa23.94■■□□□ 1.42
Ebf3-201ENSMUST00000033378 Armcx1Q9CX83 456 aa23.94■■□□□ 1.42
Ebf3-201ENSMUST00000033378 Rundc1Q0VDN7 615 aa23.93■■□□□ 1.42
Ebf3-201ENSMUST00000033378 Baz1bQ9Z277 1479 aa23.92■■□□□ 1.42
Ebf3-201ENSMUST00000033378 Rwdd1Q9CQK7 243 aa23.92■■□□□ 1.42
Ebf3-201ENSMUST00000033378 Chmp5Q9D7S9 219 aa23.92■■□□□ 1.42
Ebf3-201ENSMUST00000033378 Arhgap27A2AB59 869 aa23.91■■□□□ 1.42
Ebf3-201ENSMUST00000033378 Ipo9Q91YE6 1041 aa23.9■■□□□ 1.42
Ebf3-201ENSMUST00000033378 Gm20521D3Z5F7 333 aa23.9■■□□□ 1.42
Ebf3-201ENSMUST00000033378 PtmaP26350 111 aa23.9■■□□□ 1.42
Ebf3-201ENSMUST00000033378 Rrp7aQ9D1C9 280 aaKnown RBP23.9■■□□□ 1.42
Ebf3-201ENSMUST00000033378 Srpk2O54781 681 aaKnown RBP23.88■■□□□ 1.41
Ebf3-201ENSMUST00000033378 Mbd3Q9Z2D8 285 aaKnown RBP23.87■■□□□ 1.41
Ebf3-201ENSMUST00000033378 CatipB9EKE5 520 aa23.87■■□□□ 1.41
Ebf3-201ENSMUST00000033378 Mphosph9A6H5Y1 991 aa23.84■■□□□ 1.41
Ebf3-201ENSMUST00000033378 Aebp1Q640N1 1128 aa23.84■■□□□ 1.41
Ebf3-201ENSMUST00000033378 Dnai1Q8C0M8 701 aa23.84■■□□□ 1.41
Ebf3-201ENSMUST00000033378 Zscan21Q07231 555 aa23.82■■□□□ 1.4
Ebf3-201ENSMUST00000033378 IqubQ8CDK3 788 aa23.79■■□□□ 1.4
Ebf3-201ENSMUST00000033378 Mak16Q8BGS0 296 aaKnown RBP23.78■■□□□ 1.4
Ebf3-201ENSMUST00000033378 AU015836B2RUM3 263 aa23.77■■□□□ 1.4
Ebf3-201ENSMUST00000033378 Fyco1Q8VDC1 1437 aa23.77■■□□□ 1.4
Ebf3-201ENSMUST00000033378 Cabp1Q9JLK7 227 aa23.77■■□□□ 1.4
Ebf3-201ENSMUST00000033378 Mapk8ip3Q9ESN9 1337 aa23.77■■□□□ 1.4
Ebf3-201ENSMUST00000033378 Map7O88735 730 aa23.76■■□□□ 1.39
Ebf3-201ENSMUST00000033378 EspnQ9ET47 871 aa23.76■■□□□ 1.39
Ebf3-201ENSMUST00000033378 Exosc9Q9JHI7 438 aaKnown RBP23.76■■□□□ 1.39
Ebf3-201ENSMUST00000033378 Rapgef2Q8CHG7 1496 aa23.75■■□□□ 1.39
Ebf3-201ENSMUST00000033378 Gm6268A2A3U9 297 aa23.75■■□□□ 1.39
Ebf3-201ENSMUST00000033378 Kif27Q7M6Z4 1394 aa23.74■■□□□ 1.39
Ebf3-201ENSMUST00000033378 Speer4f1Q9D5Q6 258 aa23.74■■□□□ 1.39
Ebf3-201ENSMUST00000033378 Arhgap35Q91YM2 1499 aa23.74■■□□□ 1.39
Ebf3-201ENSMUST00000033378 Map4P27546 1125 aaKnown RBP23.74■■□□□ 1.39
Ebf3-201ENSMUST00000033378 Plppr3Q7TPB0 716 aa23.73■■□□□ 1.39
Ebf3-201ENSMUST00000033378 Dnttip2Q8R2M2 758 aaKnown RBP23.72■■□□□ 1.39
Ebf3-201ENSMUST00000033378 Trak1Q6PD31 939 aa23.72■■□□□ 1.39
Ebf3-201ENSMUST00000033378 Cnga1P29974 684 aa23.7■■□□□ 1.38
Ebf3-201ENSMUST00000033378 Smg6P61406 1418 aaKnown RBP23.69■■□□□ 1.38
Ebf3-201ENSMUST00000033378 Stk24Q99KH8 431 aa23.69■■□□□ 1.38
Ebf3-201ENSMUST00000033378 CntlnA2AM05 1397 aa23.68■■□□□ 1.38
Ebf3-201ENSMUST00000033378 Ercc6F8VPZ5 1481 aa23.68■■□□□ 1.38
Ebf3-201ENSMUST00000033378 ChgaP26339 463 aaKnown RBP23.68■■□□□ 1.38
Ebf3-201ENSMUST00000033378 CftrP26361 1476 aa23.68■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms