RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Hsp90aa1P07901 733 aaKnown RBP17.97■□□□□ 0.47
Notch1-201ENSMUST00000028288 Vsig10D3YX43 558 aa17.9■□□□□ 0.46
Notch1-201ENSMUST00000028288 Setd5Q5XJV7 1441 aa17.89■□□□□ 0.45
Notch1-201ENSMUST00000028288 Ythdc1E9Q5K9 736 aaKnown RBP17.89■□□□□ 0.45
Notch1-201ENSMUST00000028288 NacadQ5SWP3 1504 aa17.88■□□□□ 0.45
Notch1-201ENSMUST00000028288 Ccdc9Q8VC31 543 aaKnown RBP17.85■□□□□ 0.45
Notch1-201ENSMUST00000028288 Hsp90ab1P11499 724 aaKnown RBP17.84■□□□□ 0.45
Notch1-201ENSMUST00000028288 Lmod3E9QA62 571 aa17.84■□□□□ 0.45
Notch1-201ENSMUST00000028288 Plppr3Q7TPB0 716 aa17.84■□□□□ 0.45
Notch1-201ENSMUST00000028288 Fam71e1A1L3C1 212 aa17.83■□□□□ 0.44
Notch1-201ENSMUST00000028288 Trim26Q99PN3 545 aa17.82■□□□□ 0.44
Notch1-201ENSMUST00000028288 CanxP35564 591 aaKnown RBP17.82■□□□□ 0.44
Notch1-201ENSMUST00000028288 Aebp2Q9Z248 504 aaKnown RBP17.81■□□□□ 0.44
Notch1-201ENSMUST00000028288 1700123L14RikQ3V2K7 440 aa17.8■□□□□ 0.44
Notch1-201ENSMUST00000028288 Golga3P55937 1487 aa17.8■□□□□ 0.44
Notch1-201ENSMUST00000028288 Trim30dE9PWL0 497 aa17.8■□□□□ 0.44
Notch1-201ENSMUST00000028288 Rgl3Q3UYI5 709 aa17.79■□□□□ 0.44
Notch1-201ENSMUST00000028288 Ubl4bQ9CQ84 188 aa17.78■□□□□ 0.44
Notch1-201ENSMUST00000028288 Fgd1P52734 960 aa17.76■□□□□ 0.43
Notch1-201ENSMUST00000028288 Trim44Q9QXA7 346 aa17.76■□□□□ 0.43
Notch1-201ENSMUST00000028288 Clstn2Q9ER65 966 aa17.75■□□□□ 0.43
Notch1-201ENSMUST00000028288 P3h3Q8CG70 732 aa17.74■□□□□ 0.43
Notch1-201ENSMUST00000028288 Ofd1Q80Z25 1017 aa17.73■□□□□ 0.43
Notch1-201ENSMUST00000028288 Eea1Q8BL66 1411 aa17.72■□□□□ 0.43
Notch1-201ENSMUST00000028288 Arid4bA2CG63 1314 aaKnown RBP17.71■□□□□ 0.43
Notch1-201ENSMUST00000028288 Ccdc18Q640L5 1455 aa17.7■□□□□ 0.42
Notch1-201ENSMUST00000028288 PtmaP26350 111 aa17.64■□□□□ 0.41
Notch1-201ENSMUST00000028288 Rsf1E9PWW9 1441 aaKnown RBP17.63■□□□□ 0.41
Notch1-201ENSMUST00000028288 Ercc6F8VPZ5 1481 aa17.63■□□□□ 0.41
Notch1-201ENSMUST00000028288 Apbb1Q9QXJ1 710 aa17.62■□□□□ 0.41
Notch1-201ENSMUST00000028288 Kif15Q6P9L6 1387 aa17.62■□□□□ 0.41
Notch1-201ENSMUST00000028288 Ccdc27Q3V036 639 aa17.61■□□□□ 0.41
Notch1-201ENSMUST00000028288 Kdm5dQ62240 1548 aa17.59■□□□□ 0.41
Notch1-201ENSMUST00000028288 Htatsf1Q8BGC0 757 aa17.58■□□□□ 0.4
Notch1-201ENSMUST00000028288 Safb2Q80YR5 991 aaKnown RBP17.57■□□□□ 0.4
Notch1-201ENSMUST00000028288 Card11Q8CIS0 1159 aa17.56■□□□□ 0.4
Notch1-201ENSMUST00000028288 Grwd1Q810D6 446 aaKnown RBP17.56■□□□□ 0.4
Notch1-201ENSMUST00000028288 Plcb2A3KGF7 1181 aa17.55■□□□□ 0.4
Notch1-201ENSMUST00000028288 Kdm2aP59997 1161 aa17.55■□□□□ 0.4
Notch1-201ENSMUST00000028288 Mtus2Q3UHD3 1353 aa17.54■□□□□ 0.4
Notch1-201ENSMUST00000028288 Mia2Q91ZV0 1396 aa17.51■□□□□ 0.39
Notch1-201ENSMUST00000028288 Irx6Q9ER75 438 aa17.51■□□□□ 0.39
Notch1-201ENSMUST00000028288 IqubQ8CDK3 788 aa17.51■□□□□ 0.39
Notch1-201ENSMUST00000028288 Cwc22Q8C5N3 908 aaKnown RBP17.5■□□□□ 0.39
Notch1-201ENSMUST00000028288 Exosc9Q9JHI7 438 aaKnown RBP17.49■□□□□ 0.39
Notch1-201ENSMUST00000028288 Neurod2Q62414 383 aa17.48■□□□□ 0.39
Notch1-201ENSMUST00000028288 Srpk2O54781 681 aaKnown RBP17.47■□□□□ 0.39
Notch1-201ENSMUST00000028288 Ppm1gQ61074 542 aa17.47■□□□□ 0.39
Notch1-201ENSMUST00000028288 SafbD3YXK2 937 aaKnown RBP17.45■□□□□ 0.38
Notch1-201ENSMUST00000028288 Mapk8ip3Q9ESN9 1337 aa17.44■□□□□ 0.38
Notch1-201ENSMUST00000028288 Armcx1Q9CX83 456 aa17.44■□□□□ 0.38
Notch1-201ENSMUST00000028288 Mroh3A0A1D5RM54 893 aa17.44■□□□□ 0.38
Notch1-201ENSMUST00000028288 Map7O88735 730 aa17.44■□□□□ 0.38
Notch1-201ENSMUST00000028288 Dbr1Q923B1 550 aa17.44■□□□□ 0.38
Notch1-201ENSMUST00000028288 B4galnt3Q6L8S8 986 aa17.42■□□□□ 0.38
Notch1-201ENSMUST00000028288 Bcl11aQ9QYE3 773 aa17.39■□□□□ 0.37
Notch1-201ENSMUST00000028288 Znf326O88291 580 aa17.38■□□□□ 0.37
Notch1-201ENSMUST00000028288 Arhgap27A2AB59 869 aa17.37■□□□□ 0.37
Notch1-201ENSMUST00000028288 Gm20521D3Z5F7 333 aa17.36■□□□□ 0.37
Notch1-201ENSMUST00000028288 Slc4a3P16283 1227 aa17.36■□□□□ 0.37
Notch1-201ENSMUST00000028288 Spryd3E9Q9B3 442 aa17.36■□□□□ 0.37
Notch1-201ENSMUST00000028288 Gm6268A2A3U9 297 aa17.35■□□□□ 0.37
Notch1-201ENSMUST00000028288 Stag3O70576 1240 aa17.35■□□□□ 0.37
Notch1-201ENSMUST00000028288 Fhad1A6PWD2 1420 aa17.34■□□□□ 0.37
Notch1-201ENSMUST00000028288 Chmp4bQ9D8B3 224 aaKnown RBP17.32■□□□□ 0.36
Notch1-201ENSMUST00000028288 Mbd3Q9Z2D8 285 aaKnown RBP17.32■□□□□ 0.36
Notch1-201ENSMUST00000028288 Hspa5P20029 655 aaKnown RBP17.31■□□□□ 0.36
Notch1-201ENSMUST00000028288 Irx3P81067 507 aa17.31■□□□□ 0.36
Notch1-201ENSMUST00000028288 Adam1bQ8R534 806 aa17.31■□□□□ 0.36
Notch1-201ENSMUST00000028288 Rrp7aQ9D1C9 280 aaKnown RBP17.31■□□□□ 0.36
Notch1-201ENSMUST00000028288 Arhgap35Q91YM2 1499 aa17.29■□□□□ 0.36
Notch1-201ENSMUST00000028288 1700019A02RikA0A087WPV9 146 aa17.28■□□□□ 0.36
Notch1-201ENSMUST00000028288 Casc1Q6TDU8 730 aa17.28■□□□□ 0.36
Notch1-201ENSMUST00000028288 Rwdd1Q9CQK7 243 aa17.28■□□□□ 0.36
Notch1-201ENSMUST00000028288 Fmn1Q05860 1466 aa17.27■□□□□ 0.36
Notch1-201ENSMUST00000028288 Cnga1P29974 684 aa17.27■□□□□ 0.35
Notch1-201ENSMUST00000028288 Ccdc88bQ4QRL3 1481 aa17.26■□□□□ 0.35
Notch1-201ENSMUST00000028288 Stk24Q99KH8 431 aa17.26■□□□□ 0.35
Notch1-201ENSMUST00000028288 PnnO35691 725 aaKnown RBP17.26■□□□□ 0.35
Notch1-201ENSMUST00000028288 KnstrnQ9D9Z1 312 aaKnown RBP17.26■□□□□ 0.35
Notch1-201ENSMUST00000028288 Cep162Q6ZQ06 1403 aa17.25■□□□□ 0.35
Notch1-201ENSMUST00000028288 Wwc2Q6NXJ0 1187 aa17.24■□□□□ 0.35
Notch1-201ENSMUST00000028288 NgefQ8CHT1 710 aa17.24■□□□□ 0.35
Notch1-201ENSMUST00000028288 NudcO35685 332 aaKnown RBP17.24■□□□□ 0.35
Notch1-201ENSMUST00000028288 Tcerg1Q8CGF7 1100 aaKnown RBP17.23■□□□□ 0.35
Notch1-201ENSMUST00000028288 Hsp90b1P08113 802 aaKnown RBP17.23■□□□□ 0.35
Notch1-201ENSMUST00000028288 Iqcf3Q9D498 203 aa17.23■□□□□ 0.35
Notch1-201ENSMUST00000028288 Cc2d2aQ8CFW7 1633 aa17.22■□□□□ 0.35
Notch1-201ENSMUST00000028288 Clstn1Q9EPL2 979 aa17.22■□□□□ 0.35
Notch1-201ENSMUST00000028288 Erich6bQ9D4S6 220 aa17.22■□□□□ 0.35
Notch1-201ENSMUST00000028288 Fyco1Q8VDC1 1437 aa17.22■□□□□ 0.35
Notch1-201ENSMUST00000028288 Dnttip2Q8R2M2 758 aaKnown RBP17.21■□□□□ 0.35
Notch1-201ENSMUST00000028288 Pes1Q9EQ61 584 aaKnown RBP17.21■□□□□ 0.35
Notch1-201ENSMUST00000028288 Rtn4Q99P72 1162 aaKnown RBP17.2■□□□□ 0.34
Notch1-201ENSMUST00000028288 Supt16hQ920B9 1047 aa17.2■□□□□ 0.34
Notch1-201ENSMUST00000028288 MccE9PWI3 1003 aa17.19■□□□□ 0.34
Notch1-201ENSMUST00000028288 Tmf1B9EKI3 1091 aa17.18■□□□□ 0.34
Notch1-201ENSMUST00000028288 Dnai1Q8C0M8 701 aa17.17■□□□□ 0.34
Notch1-201ENSMUST00000028288 Rundc1Q0VDN7 615 aa17.17■□□□□ 0.34
Notch1-201ENSMUST00000028288 Baz1bQ9Z277 1479 aa17.17■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms