RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Rhox8Q6VSS7 320 aa23.66■■□□□ 1.38
Notch1-201ENSMUST00000028288 Rpgrip1Q9EPQ2 1331 aa22.08■■□□□ 1.13
Notch1-201ENSMUST00000028288 Ehmt2Q9Z148 1263 aaKnown RBP21.69■■□□□ 1.06
Notch1-201ENSMUST00000028288 Las1lA2BE28 776 aaKnown RBP21.3■■□□□ 1
Notch1-201ENSMUST00000028288 Cngb1E1AZ71 1325 aa21.27■■□□□ 1
Notch1-201ENSMUST00000028288 Wdr66E9Q743 1299 aa21.09■□□□□ 0.97
Notch1-201ENSMUST00000028288 Rtl1Q7M732 1744 aa21.03■□□□□ 0.96
Notch1-201ENSMUST00000028288 Ccdc136Q3TVA9 1136 aa21.03■□□□□ 0.96
Notch1-201ENSMUST00000028288 NischQ80TM9 1593 aa20.97■□□□□ 0.95
Notch1-201ENSMUST00000028288 Zeb1Q64318 1117 aa20.95■□□□□ 0.94
Notch1-201ENSMUST00000028288 Pelp1Q9DBD5 1123 aaKnown RBP20.85■□□□□ 0.93
Notch1-201ENSMUST00000028288 Esf1Q3V1V3 845 aaKnown RBP20.83■□□□□ 0.93
Notch1-201ENSMUST00000028288 Ccdc180J3QNE4 1664 aa20.74■□□□□ 0.91
Notch1-201ENSMUST00000028288 Ube2uB1AUC4 352 aa20.72■□□□□ 0.91
Notch1-201ENSMUST00000028288 Gab3Q8BSM5 595 aa20.66■□□□□ 0.9
Notch1-201ENSMUST00000028288 Trim41Q5NCC3 630 aa20.49■□□□□ 0.87
Notch1-201ENSMUST00000028288 Npm2Q80W85 207 aa20.49■□□□□ 0.87
Notch1-201ENSMUST00000028288 Acin1Q9JIX8 1338 aaKnown RBP20.38■□□□□ 0.85
Notch1-201ENSMUST00000028288 Myt1lP97500 1187 aa20.36■□□□□ 0.85
Notch1-201ENSMUST00000028288 CenpbP27790 599 aa20.24■□□□□ 0.83
Notch1-201ENSMUST00000028288 Amer1Q7TS75 1132 aa20.13■□□□□ 0.81
Notch1-201ENSMUST00000028288 NefmP08553 848 aa20.11■□□□□ 0.81
Notch1-201ENSMUST00000028288 UbtfP25976 765 aaKnown RBP20.06■□□□□ 0.8
Notch1-201ENSMUST00000028288 Stra8P70278 393 aa20.02■□□□□ 0.8
Notch1-201ENSMUST00000028288 Slc24a1Q91WD8 1130 aa19.95■□□□□ 0.78
Notch1-201ENSMUST00000028288 Ttbk1Q6PCN3 1308 aa19.71■□□□□ 0.75
Notch1-201ENSMUST00000028288 Cdk11bP24788 784 aaKnown RBP19.67■□□□□ 0.74
Notch1-201ENSMUST00000028288 Pcgf6Q99NA9 353 aa19.65■□□□□ 0.74
Notch1-201ENSMUST00000028288 HrcG5E8J6 738 aa19.57■□□□□ 0.72
Notch1-201ENSMUST00000028288 Zcchc6Q5BLK4 1491 aaKnown RBP19.5■□□□□ 0.71
Notch1-201ENSMUST00000028288 Nop58Q6DFW4 536 aaKnown RBP19.44■□□□□ 0.7
Notch1-201ENSMUST00000028288 Il27Q8K3I6 234 aa19.44■□□□□ 0.7
Notch1-201ENSMUST00000028288 Tnnt3Q9QZ47 272 aa19.44■□□□□ 0.7
Notch1-201ENSMUST00000028288 NrdcQ8BHG1 1161 aa19.42■□□□□ 0.7
Notch1-201ENSMUST00000028288 NclP09405 707 aaKnown RBP19.41■□□□□ 0.7
Notch1-201ENSMUST00000028288 Myt1Q8CFC2 1127 aa19.41■□□□□ 0.7
Notch1-201ENSMUST00000028288 Fam50aQ9WV03 339 aaKnown RBP19.41■□□□□ 0.7
Notch1-201ENSMUST00000028288 Abcc9P70170 1546 aa19.39■□□□□ 0.7
Notch1-201ENSMUST00000028288 NeflP08551 543 aa19.38■□□□□ 0.69
Notch1-201ENSMUST00000028288 4933416C03RikQ3V063 378 aa19.38■□□□□ 0.69
Notch1-201ENSMUST00000028288 Ap3b1Q9Z1T1 1105 aa19.37■□□□□ 0.69
Notch1-201ENSMUST00000028288 Neurod1Q60867 357 aa19.34■□□□□ 0.69
Notch1-201ENSMUST00000028288 Eif5bQ05D44 1216 aaKnown RBP19.34■□□□□ 0.69
Notch1-201ENSMUST00000028288 Gm35339A0A140LHH9 1649 aa19.34■□□□□ 0.69
Notch1-201ENSMUST00000028288 Supt5hO55201 1082 aaKnown RBP19.33■□□□□ 0.68
Notch1-201ENSMUST00000028288 Ppargc1bQ8VHJ7 1014 aa19.32■□□□□ 0.68
Notch1-201ENSMUST00000028288 Anp32bQ9EST5 272 aaKnown RBP19.3■□□□□ 0.68
Notch1-201ENSMUST00000028288 4930567H17RikQ3V0K5 233 aa19.26■□□□□ 0.67
Notch1-201ENSMUST00000028288 TonslQ6NZL6 1363 aa19.25■□□□□ 0.67
Notch1-201ENSMUST00000028288 Os9Q8K2C7 672 aa19.12■□□□□ 0.65
Notch1-201ENSMUST00000028288 Mier1Q5UAK0 511 aa19.07■□□□□ 0.64
Notch1-201ENSMUST00000028288 Rtl5Q5DTT4 599 aa18.97■□□□□ 0.63
Notch1-201ENSMUST00000028288 ClspnQ80YR7 1315 aa18.9■□□□□ 0.62
Notch1-201ENSMUST00000028288 Abcc8B2RUS7 1588 aa18.81■□□□□ 0.6
Notch1-201ENSMUST00000028288 Plekhg3Q4VAC9 1341 aa18.8■□□□□ 0.6
Notch1-201ENSMUST00000028288 Anp32aO35381 247 aa18.76■□□□□ 0.59
Notch1-201ENSMUST00000028288 Rb1cc1Q9ESK9 1588 aa18.73■□□□□ 0.59
Notch1-201ENSMUST00000028288 Zbtb7cQ8VCZ7 619 aa18.72■□□□□ 0.59
Notch1-201ENSMUST00000028288 Lmod2Q3UHZ5 550 aa18.69■□□□□ 0.58
Notch1-201ENSMUST00000028288 Dcaf1Q80TR8 1506 aa18.67■□□□□ 0.58
Notch1-201ENSMUST00000028288 DaxxO35613 739 aa18.65■□□□□ 0.58
Notch1-201ENSMUST00000028288 DiexfQ8BTT6 772 aaKnown RBP18.63■□□□□ 0.57
Notch1-201ENSMUST00000028288 Mapk8ip2Q9ERE9 830 aa18.6■□□□□ 0.57
Notch1-201ENSMUST00000028288 Hnrnpul2Q00PI9 745 aaKnown RBP18.58■□□□□ 0.57
Notch1-201ENSMUST00000028288 Gm38655A0A286YDK6 273 aa18.58■□□□□ 0.56
Notch1-201ENSMUST00000028288 Nlrp6Q91WS2 869 aa18.55■□□□□ 0.56
Notch1-201ENSMUST00000028288 Zbtb4Q5F293 982 aa18.55■□□□□ 0.56
Notch1-201ENSMUST00000028288 Brd4Q9ESU6 1400 aaKnown RBP18.54■□□□□ 0.56
Notch1-201ENSMUST00000028288 Csrnp3P59055 597 aa18.54■□□□□ 0.56
Notch1-201ENSMUST00000028288 Cep164Q5DU05 1446 aa18.54■□□□□ 0.56
Notch1-201ENSMUST00000028288 Chic1Q8CBW7 227 aa18.51■□□□□ 0.55
Notch1-201ENSMUST00000028288 Npm1Q61937 292 aaKnown RBP18.5■□□□□ 0.55
Notch1-201ENSMUST00000028288 Eid3Q3V124 375 aa18.48■□□□□ 0.55
Notch1-201ENSMUST00000028288 Erich6D3Z6S9 713 aa18.47■□□□□ 0.55
Notch1-201ENSMUST00000028288 Polr3glQ8R0C0 218 aa18.45■□□□□ 0.54
Notch1-201ENSMUST00000028288 Clip1Q922J3 1391 aa18.44■□□□□ 0.54
Notch1-201ENSMUST00000028288 Anks4bQ8K3X6 423 aa18.43■□□□□ 0.54
Notch1-201ENSMUST00000028288 ArxO35085 564 aa18.43■□□□□ 0.54
Notch1-201ENSMUST00000028288 Gm13697A2AK42 830 aa18.42■□□□□ 0.54
Notch1-201ENSMUST00000028288 Sall2Q9QX96 1004 aa18.4■□□□□ 0.54
Notch1-201ENSMUST00000028288 Prdm10Q3UTQ7 1184 aa18.38■□□□□ 0.53
Notch1-201ENSMUST00000028288 Atp1b4Q99ME6 356 aa18.34■□□□□ 0.53
Notch1-201ENSMUST00000028288 Ifnlr1Q8CGK5 535 aa18.32■□□□□ 0.52
Notch1-201ENSMUST00000028288 Aplp2Q06335 707 aa18.29■□□□□ 0.52
Notch1-201ENSMUST00000028288 Calr4Q3TQS0 420 aa18.28■□□□□ 0.52
Notch1-201ENSMUST00000028288 Ppp4r2Q0VGB7 417 aa18.24■□□□□ 0.51
Notch1-201ENSMUST00000028288 Hdac5Q9Z2V6 1113 aa18.19■□□□□ 0.5
Notch1-201ENSMUST00000028288 Gm13695A2AK44 830 aa18.15■□□□□ 0.5
Notch1-201ENSMUST00000028288 Ccer2J3QPU5 274 aa18.13■□□□□ 0.49
Notch1-201ENSMUST00000028288 Rad21Q61550 635 aaKnown RBP18.1■□□□□ 0.49
Notch1-201ENSMUST00000028288 Wdr43Q6ZQL4 677 aaKnown RBP18.08■□□□□ 0.49
Notch1-201ENSMUST00000028288 Rangap1P46061 589 aaKnown RBP18.08■□□□□ 0.49
Notch1-201ENSMUST00000028288 Upf2A2AT37 1269 aaKnown RBP18.08■□□□□ 0.48
Notch1-201ENSMUST00000028288 BlmO88700 1416 aa18.06■□□□□ 0.48
Notch1-201ENSMUST00000028288 Fkbp15Q6P9Q6 1216 aaKnown RBP18.05■□□□□ 0.48
Notch1-201ENSMUST00000028288 Chic2Q9D9G3 165 aa18.03■□□□□ 0.48
Notch1-201ENSMUST00000028288 Baz1aO88379 1555 aa18.03■□□□□ 0.48
Notch1-201ENSMUST00000028288 CatipB9EKE5 520 aa18.01■□□□□ 0.47
Notch1-201ENSMUST00000028288 DekQ7TNV0 380 aaKnown RBP18■□□□□ 0.47
Notch1-201ENSMUST00000028288 Mrs2Q5NCE8 434 aa18■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms