RNA–Protein interactions for RNA: ENSMUST00000020931.5

Smc6-201, Transcript of Structural maintenance of chromosomes protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc6, Length 5,603 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6-201ENSMUST00000020931 Brd4Q9ESU6 1400 aaKnown RBP25.31■■□□□ 1.64
Smc6-201ENSMUST00000020931 Ccdc27Q3V036 639 aa25.31■■□□□ 1.64
Smc6-201ENSMUST00000020931 Irx3P81067 507 aa25.3■■□□□ 1.64
Smc6-201ENSMUST00000020931 Ccer2J3QPU5 274 aa25.3■■□□□ 1.64
Smc6-201ENSMUST00000020931 Trim44Q9QXA7 346 aa25.29■■□□□ 1.64
Smc6-201ENSMUST00000020931 Clstn2Q9ER65 966 aa25.29■■□□□ 1.64
Smc6-201ENSMUST00000020931 DekQ7TNV0 380 aaKnown RBP25.26■■□□□ 1.63
Smc6-201ENSMUST00000020931 Fgd1P52734 960 aa25.23■■□□□ 1.63
Smc6-201ENSMUST00000020931 Chic2Q9D9G3 165 aa25.21■■□□□ 1.63
Smc6-201ENSMUST00000020931 CanxP35564 591 aaKnown RBP25.18■■□□□ 1.62
Smc6-201ENSMUST00000020931 Rad21Q61550 635 aaKnown RBP25.17■■□□□ 1.62
Smc6-201ENSMUST00000020931 Znf326O88291 580 aa25.09■■□□□ 1.61
Smc6-201ENSMUST00000020931 SafbD3YXK2 937 aaKnown RBP25.07■■□□□ 1.6
Smc6-201ENSMUST00000020931 Taok2Q6ZQ29 1240 aa25.06■■□□□ 1.6
Smc6-201ENSMUST00000020931 Irx6Q9ER75 438 aa25.03■■□□□ 1.6
Smc6-201ENSMUST00000020931 Dcaf1Q80TR8 1506 aa24.98■■□□□ 1.59
Smc6-201ENSMUST00000020931 PrkcshO08795 521 aa24.97■■□□□ 1.59
Smc6-201ENSMUST00000020931 Tnnt2P50752 301 aa24.95■■□□□ 1.58
Smc6-201ENSMUST00000020931 Trim26Q99PN3 545 aa24.95■■□□□ 1.58
Smc6-201ENSMUST00000020931 IqubQ8CDK3 788 aa24.94■■□□□ 1.58
Smc6-201ENSMUST00000020931 BlmO88700 1416 aa24.93■■□□□ 1.58
Smc6-201ENSMUST00000020931 Aebp2Q9Z248 504 aaKnown RBP24.92■■□□□ 1.58
Smc6-201ENSMUST00000020931 Hsp90ab1P11499 724 aaKnown RBP24.9■■□□□ 1.58
Smc6-201ENSMUST00000020931 Mrs2Q5NCE8 434 aa24.9■■□□□ 1.58
Smc6-201ENSMUST00000020931 MyclP10166 368 aa24.89■■□□□ 1.57
Smc6-201ENSMUST00000020931 Pknox2Q8BG99 474 aa24.88■■□□□ 1.57
Smc6-201ENSMUST00000020931 PtmaP26350 111 aa24.84■■□□□ 1.57
Smc6-201ENSMUST00000020931 Arid4bA2CG63 1314 aaKnown RBP24.84■■□□□ 1.57
Smc6-201ENSMUST00000020931 Spryd3E9Q9B3 442 aa24.84■■□□□ 1.57
Smc6-201ENSMUST00000020931 Znf316Q6PGE4 1016 aa24.84■■□□□ 1.57
Smc6-201ENSMUST00000020931 Trim30dE9PWL0 497 aa24.82■■□□□ 1.56
Smc6-201ENSMUST00000020931 AU015836B2RUM3 263 aa24.8■■□□□ 1.56
Smc6-201ENSMUST00000020931 Abcc8B2RUS7 1588 aa24.78■■□□□ 1.56
Smc6-201ENSMUST00000020931 Rgl3Q3UYI5 709 aa24.78■■□□□ 1.56
Smc6-201ENSMUST00000020931 Srpk2O54781 681 aaKnown RBP24.77■■□□□ 1.56
Smc6-201ENSMUST00000020931 Plcb2A3KGF7 1181 aa24.77■■□□□ 1.56
Smc6-201ENSMUST00000020931 Cep164Q5DU05 1446 aa24.75■■□□□ 1.55
Smc6-201ENSMUST00000020931 Exosc9Q9JHI7 438 aaKnown RBP24.74■■□□□ 1.55
Smc6-201ENSMUST00000020931 Kdm2aP59997 1161 aa24.72■■□□□ 1.55
Smc6-201ENSMUST00000020931 Htatsf1Q8BGC0 757 aa24.71■■□□□ 1.55
Smc6-201ENSMUST00000020931 NgefQ8CHT1 710 aa24.71■■□□□ 1.55
Smc6-201ENSMUST00000020931 Gtf3c3Q3TMP1 882 aa24.7■■□□□ 1.54
Smc6-201ENSMUST00000020931 Rtn4Q99P72 1162 aaKnown RBP24.7■■□□□ 1.54
Smc6-201ENSMUST00000020931 Arhgap27A2AB59 869 aa24.68■■□□□ 1.54
Smc6-201ENSMUST00000020931 Setd5Q5XJV7 1441 aa24.65■■□□□ 1.54
Smc6-201ENSMUST00000020931 Dnttip2Q8R2M2 758 aaKnown RBP24.65■■□□□ 1.54
Smc6-201ENSMUST00000020931 Gm20521D3Z5F7 333 aa24.62■■□□□ 1.53
Smc6-201ENSMUST00000020931 Mroh3A0A1D5RM54 893 aa24.6■■□□□ 1.53
Smc6-201ENSMUST00000020931 Mapk8ip3Q9ESN9 1337 aa24.6■■□□□ 1.53
Smc6-201ENSMUST00000020931 Ercc6F8VPZ5 1481 aa24.6■■□□□ 1.53
Smc6-201ENSMUST00000020931 Clstn1Q9EPL2 979 aa24.59■■□□□ 1.53
Smc6-201ENSMUST00000020931 Rb1cc1Q9ESK9 1588 aa24.58■■□□□ 1.53
Smc6-201ENSMUST00000020931 Kif15Q6P9L6 1387 aa24.57■■□□□ 1.52
Smc6-201ENSMUST00000020931 Rsf1E9PWW9 1441 aaKnown RBP24.55■■□□□ 1.52
Smc6-201ENSMUST00000020931 Slc4a3P16283 1227 aa24.54■■□□□ 1.52
Smc6-201ENSMUST00000020931 Stag3O70576 1240 aa24.52■■□□□ 1.52
Smc6-201ENSMUST00000020931 Ppm1gQ61074 542 aa24.51■■□□□ 1.51
Smc6-201ENSMUST00000020931 Grwd1Q810D6 446 aaKnown RBP24.51■■□□□ 1.51
Smc6-201ENSMUST00000020931 Iqcf3Q9D498 203 aa24.51■■□□□ 1.51
Smc6-201ENSMUST00000020931 Zfp777B9EKF4 885 aa24.5■■□□□ 1.51
Smc6-201ENSMUST00000020931 Stk24Q99KH8 431 aa24.5■■□□□ 1.51
Smc6-201ENSMUST00000020931 Rrp7aQ9D1C9 280 aaKnown RBP24.49■■□□□ 1.51
Smc6-201ENSMUST00000020931 PnnO35691 725 aaKnown RBP24.49■■□□□ 1.51
Smc6-201ENSMUST00000020931 Ofd1Q80Z25 1017 aa24.49■■□□□ 1.51
Smc6-201ENSMUST00000020931 Ccdc18Q640L5 1455 aa24.48■■□□□ 1.51
Smc6-201ENSMUST00000020931 Dbr1Q923B1 550 aa24.48■■□□□ 1.51
Smc6-201ENSMUST00000020931 Ggt6Q6PDE7 497 aa24.46■■□□□ 1.51
Smc6-201ENSMUST00000020931 Ppp1r18Q8BQ30 594 aa24.46■■□□□ 1.51
Smc6-201ENSMUST00000020931 Gm6268A2A3U9 297 aa24.45■■□□□ 1.5
Smc6-201ENSMUST00000020931 Erich6bQ9D4S6 220 aa24.44■■□□□ 1.5
Smc6-201ENSMUST00000020931 Pes1Q9EQ61 584 aaKnown RBP24.44■■□□□ 1.5
Smc6-201ENSMUST00000020931 Card11Q8CIS0 1159 aa24.43■■□□□ 1.5
Smc6-201ENSMUST00000020931 Podxl2Q8CAE9 603 aa24.41■■□□□ 1.5
Smc6-201ENSMUST00000020931 Supt16hQ920B9 1047 aa24.41■■□□□ 1.5
Smc6-201ENSMUST00000020931 B4galnt3Q6L8S8 986 aa24.4■■□□□ 1.5
Smc6-201ENSMUST00000020931 Eif4g2Q62448 906 aaKnown RBP24.38■■□□□ 1.49
Smc6-201ENSMUST00000020931 Chmp4bQ9D8B3 224 aaKnown RBP24.38■■□□□ 1.49
Smc6-201ENSMUST00000020931 Mtus2Q3UHD3 1353 aa24.37■■□□□ 1.49
Smc6-201ENSMUST00000020931 Neurod2Q62414 383 aa24.37■■□□□ 1.49
Smc6-201ENSMUST00000020931 Apbb1Q9QXJ1 710 aa24.37■■□□□ 1.49
Smc6-201ENSMUST00000020931 1700019A02RikA0A087WPV9 146 aa24.35■■□□□ 1.49
Smc6-201ENSMUST00000020931 IbspQ61711 324 aa24.35■■□□□ 1.49
Smc6-201ENSMUST00000020931 MsnP26041 577 aaKnown RBP24.34■■□□□ 1.49
Smc6-201ENSMUST00000020931 NudcO35685 332 aaKnown RBP24.33■■□□□ 1.49
Smc6-201ENSMUST00000020931 Adam1bQ8R534 806 aa24.3■■□□□ 1.48
Smc6-201ENSMUST00000020931 Ipo9Q91YE6 1041 aa24.29■■□□□ 1.48
Smc6-201ENSMUST00000020931 Rrp12Q6P5B0 1295 aaKnown RBP24.29■■□□□ 1.48
Smc6-201ENSMUST00000020931 Cwc22Q8C5N3 908 aaKnown RBP24.27■■□□□ 1.48
Smc6-201ENSMUST00000020931 Plcd4Q8K3R3 807 aa24.25■■□□□ 1.47
Smc6-201ENSMUST00000020931 Sh3bp5Q9Z131 463 aa24.24■■□□□ 1.47
Smc6-201ENSMUST00000020931 Map7O88735 730 aa24.23■■□□□ 1.47
Smc6-201ENSMUST00000020931 Cnga1P29974 684 aa24.23■■□□□ 1.47
Smc6-201ENSMUST00000020931 Hsp90b1P08113 802 aaKnown RBP24.22■■□□□ 1.47
Smc6-201ENSMUST00000020931 Q8BT18 775 aa24.2■■□□□ 1.46
Smc6-201ENSMUST00000020931 Eea1Q8BL66 1411 aa24.19■■□□□ 1.46
Smc6-201ENSMUST00000020931 Tcerg1Q8CGF7 1100 aaKnown RBP24.18■■□□□ 1.46
Smc6-201ENSMUST00000020931 Armcx1Q9CX83 456 aa24.17■■□□□ 1.46
Smc6-201ENSMUST00000020931 Casc1Q6TDU8 730 aa24.17■■□□□ 1.46
Smc6-201ENSMUST00000020931 NacadQ5SWP3 1504 aa24.16■■□□□ 1.46
Smc6-201ENSMUST00000020931 Nolc1E9Q5C9 702 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms