RNA–Protein interactions for RNA: ENSMUST00000020931.5

Smc6-201, Transcript of Structural maintenance of chromosomes protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc6, Length 5,603 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6-201ENSMUST00000020931 Rhox8Q6VSS7 320 aa33.44■■■□□ 2.94
Smc6-201ENSMUST00000020931 Rpgrip1Q9EPQ2 1331 aa31.16■■■□□ 2.58
Smc6-201ENSMUST00000020931 Las1lA2BE28 776 aaKnown RBP30.73■■■□□ 2.51
Smc6-201ENSMUST00000020931 Cngb1E1AZ71 1325 aa30.39■■■□□ 2.45
Smc6-201ENSMUST00000020931 Ehmt2Q9Z148 1263 aaKnown RBP30.37■■■□□ 2.45
Smc6-201ENSMUST00000020931 Esf1Q3V1V3 845 aaKnown RBP29.77■■■□□ 2.36
Smc6-201ENSMUST00000020931 Pelp1Q9DBD5 1123 aaKnown RBP29.69■■■□□ 2.34
Smc6-201ENSMUST00000020931 Ube2uB1AUC4 352 aa29.67■■■□□ 2.34
Smc6-201ENSMUST00000020931 Wdr66E9Q743 1299 aa29.52■■■□□ 2.32
Smc6-201ENSMUST00000020931 Zeb1Q64318 1117 aa29.49■■■□□ 2.31
Smc6-201ENSMUST00000020931 Amer1Q7TS75 1132 aa29.48■■■□□ 2.31
Smc6-201ENSMUST00000020931 Ccdc136Q3TVA9 1136 aa29.34■■■□□ 2.29
Smc6-201ENSMUST00000020931 CenpbP27790 599 aa29.27■■■□□ 2.28
Smc6-201ENSMUST00000020931 Npm2Q80W85 207 aa29.17■■■□□ 2.26
Smc6-201ENSMUST00000020931 Gab3Q8BSM5 595 aa28.97■■■□□ 2.23
Smc6-201ENSMUST00000020931 Trim41Q5NCC3 630 aa28.77■■■□□ 2.2
Smc6-201ENSMUST00000020931 Myt1lP97500 1187 aa28.75■■■□□ 2.19
Smc6-201ENSMUST00000020931 Myt1Q8CFC2 1127 aa28.59■■■□□ 2.17
Smc6-201ENSMUST00000020931 Acin1Q9JIX8 1338 aaKnown RBP28.57■■■□□ 2.16
Smc6-201ENSMUST00000020931 Ttbk1Q6PCN3 1308 aa28.54■■■□□ 2.16
Smc6-201ENSMUST00000020931 Pcgf6Q99NA9 353 aa28.3■■■□□ 2.12
Smc6-201ENSMUST00000020931 DiexfQ8BTT6 772 aaKnown RBP28.24■■■□□ 2.11
Smc6-201ENSMUST00000020931 4930567H17RikQ3V0K5 233 aa27.98■■■□□ 2.07
Smc6-201ENSMUST00000020931 4933416C03RikQ3V063 378 aa27.93■■■□□ 2.06
Smc6-201ENSMUST00000020931 Cdk11bP24788 784 aaKnown RBP27.87■■■□□ 2.05
Smc6-201ENSMUST00000020931 UbtfP25976 765 aaKnown RBP27.86■■■□□ 2.05
Smc6-201ENSMUST00000020931 Slc24a1Q91WD8 1130 aa27.81■■■□□ 2.04
Smc6-201ENSMUST00000020931 Il27Q8K3I6 234 aa27.81■■■□□ 2.04
Smc6-201ENSMUST00000020931 Stra8P70278 393 aa27.8■■■□□ 2.04
Smc6-201ENSMUST00000020931 NefmP08553 848 aa27.76■■■□□ 2.04
Smc6-201ENSMUST00000020931 NischQ80TM9 1593 aa27.74■■■□□ 2.03
Smc6-201ENSMUST00000020931 Supt5hO55201 1082 aaKnown RBP27.55■■■□□ 2
Smc6-201ENSMUST00000020931 Nop58Q6DFW4 536 aaKnown RBP27.47■■□□□ 1.99
Smc6-201ENSMUST00000020931 Os9Q8K2C7 672 aa27.47■■□□□ 1.99
Smc6-201ENSMUST00000020931 Anp32bQ9EST5 272 aaKnown RBP27.39■■□□□ 1.97
Smc6-201ENSMUST00000020931 Tnnt3Q9QZ47 272 aa27.34■■□□□ 1.97
Smc6-201ENSMUST00000020931 Ppargc1bQ8VHJ7 1014 aa27.3■■□□□ 1.96
Smc6-201ENSMUST00000020931 Ap3b1Q9Z1T1 1105 aa27.26■■□□□ 1.95
Smc6-201ENSMUST00000020931 Neurod1Q60867 357 aa27.25■■□□□ 1.95
Smc6-201ENSMUST00000020931 Fam50aQ9WV03 339 aaKnown RBP27.24■■□□□ 1.95
Smc6-201ENSMUST00000020931 NrdcQ8BHG1 1161 aa27.21■■□□□ 1.95
Smc6-201ENSMUST00000020931 Rtl5Q5DTT4 599 aa27.18■■□□□ 1.94
Smc6-201ENSMUST00000020931 HrcG5E8J6 738 aa27.14■■□□□ 1.94
Smc6-201ENSMUST00000020931 NeflP08551 543 aa27.07■■□□□ 1.92
Smc6-201ENSMUST00000020931 Eif5bQ05D44 1216 aaKnown RBP27.07■■□□□ 1.92
Smc6-201ENSMUST00000020931 Gm38655A0A286YDK6 273 aa27■■□□□ 1.91
Smc6-201ENSMUST00000020931 NclP09405 707 aaKnown RBP26.98■■□□□ 1.91
Smc6-201ENSMUST00000020931 Gm13697A2AK42 830 aa26.91■■□□□ 1.9
Smc6-201ENSMUST00000020931 Zcchc6Q5BLK4 1491 aaKnown RBP26.83■■□□□ 1.88
Smc6-201ENSMUST00000020931 Csrnp3P59055 597 aa26.82■■□□□ 1.88
Smc6-201ENSMUST00000020931 DaxxO35613 739 aa26.78■■□□□ 1.88
Smc6-201ENSMUST00000020931 Anp32aO35381 247 aa26.72■■□□□ 1.87
Smc6-201ENSMUST00000020931 Abcc9P70170 1546 aa26.71■■□□□ 1.87
Smc6-201ENSMUST00000020931 Zbtb7cQ8VCZ7 619 aa26.71■■□□□ 1.87
Smc6-201ENSMUST00000020931 Ccdc180J3QNE4 1664 aa26.68■■□□□ 1.86
Smc6-201ENSMUST00000020931 Ifnlr1Q8CGK5 535 aa26.62■■□□□ 1.85
Smc6-201ENSMUST00000020931 Hnrnpul2Q00PI9 745 aaKnown RBP26.59■■□□□ 1.85
Smc6-201ENSMUST00000020931 Gm35339A0A140LHH9 1649 aa26.59■■□□□ 1.85
Smc6-201ENSMUST00000020931 Npm1Q61937 292 aaKnown RBP26.57■■□□□ 1.84
Smc6-201ENSMUST00000020931 Chic1Q8CBW7 227 aa26.51■■□□□ 1.83
Smc6-201ENSMUST00000020931 Atp1b4Q99ME6 356 aa26.47■■□□□ 1.83
Smc6-201ENSMUST00000020931 Aplp2Q06335 707 aa26.44■■□□□ 1.82
Smc6-201ENSMUST00000020931 Anks4bQ8K3X6 423 aa26.42■■□□□ 1.82
Smc6-201ENSMUST00000020931 TonslQ6NZL6 1363 aa26.39■■□□□ 1.82
Smc6-201ENSMUST00000020931 Gm13695A2AK44 830 aa26.36■■□□□ 1.81
Smc6-201ENSMUST00000020931 Erich6D3Z6S9 713 aa26.34■■□□□ 1.81
Smc6-201ENSMUST00000020931 Lmod2Q3UHZ5 550 aa26.33■■□□□ 1.81
Smc6-201ENSMUST00000020931 Rtl1Q7M732 1744 aa26.27■■□□□ 1.8
Smc6-201ENSMUST00000020931 Mier1Q5UAK0 511 aa26.22■■□□□ 1.79
Smc6-201ENSMUST00000020931 Plppr3Q7TPB0 716 aa26.21■■□□□ 1.79
Smc6-201ENSMUST00000020931 Nlrp6Q91WS2 869 aa26.21■■□□□ 1.79
Smc6-201ENSMUST00000020931 Bcl11aQ9QYE3 773 aa26.2■■□□□ 1.78
Smc6-201ENSMUST00000020931 ClspnQ80YR7 1315 aa26.18■■□□□ 1.78
Smc6-201ENSMUST00000020931 Zbtb4Q5F293 982 aa26.16■■□□□ 1.78
Smc6-201ENSMUST00000020931 1700123L14RikQ3V2K7 440 aa26.14■■□□□ 1.78
Smc6-201ENSMUST00000020931 Ythdc1E9Q5K9 736 aaKnown RBP26.12■■□□□ 1.77
Smc6-201ENSMUST00000020931 Sall2Q9QX96 1004 aa26.11■■□□□ 1.77
Smc6-201ENSMUST00000020931 Hdac5Q9Z2V6 1113 aa26.07■■□□□ 1.76
Smc6-201ENSMUST00000020931 Prdm10Q3UTQ7 1184 aa26.06■■□□□ 1.76
Smc6-201ENSMUST00000020931 Fkbp15Q6P9Q6 1216 aaKnown RBP26.03■■□□□ 1.76
Smc6-201ENSMUST00000020931 Mapk8ip2Q9ERE9 830 aa26.01■■□□□ 1.76
Smc6-201ENSMUST00000020931 Polr3glQ8R0C0 218 aa25.99■■□□□ 1.75
Smc6-201ENSMUST00000020931 ArxO35085 564 aa25.96■■□□□ 1.75
Smc6-201ENSMUST00000020931 Plekhg3Q4VAC9 1341 aa25.96■■□□□ 1.75
Smc6-201ENSMUST00000020931 Lmod3E9QA62 571 aa25.91■■□□□ 1.74
Smc6-201ENSMUST00000020931 Fam71e1A1L3C1 212 aa25.88■■□□□ 1.73
Smc6-201ENSMUST00000020931 Ppp4r2Q0VGB7 417 aa25.86■■□□□ 1.73
Smc6-201ENSMUST00000020931 Hsp90aa1P07901 733 aaKnown RBP25.84■■□□□ 1.73
Smc6-201ENSMUST00000020931 CatipB9EKE5 520 aa25.78■■□□□ 1.72
Smc6-201ENSMUST00000020931 Safb2Q80YR5 991 aaKnown RBP25.75■■□□□ 1.71
Smc6-201ENSMUST00000020931 Calr4Q3TQS0 420 aa25.75■■□□□ 1.71
Smc6-201ENSMUST00000020931 Ccdc9Q8VC31 543 aaKnown RBP25.72■■□□□ 1.71
Smc6-201ENSMUST00000020931 Wdr43Q6ZQL4 677 aaKnown RBP25.53■■□□□ 1.68
Smc6-201ENSMUST00000020931 Ubl4bQ9CQ84 188 aa25.52■■□□□ 1.68
Smc6-201ENSMUST00000020931 Rangap1P46061 589 aaKnown RBP25.48■■□□□ 1.67
Smc6-201ENSMUST00000020931 Upf2A2AT37 1269 aaKnown RBP25.47■■□□□ 1.67
Smc6-201ENSMUST00000020931 Clip1Q922J3 1391 aa25.39■■□□□ 1.65
Smc6-201ENSMUST00000020931 P3h3Q8CG70 732 aa25.37■■□□□ 1.65
Smc6-201ENSMUST00000020931 Eid3Q3V124 375 aa25.35■■□□□ 1.65
Smc6-201ENSMUST00000020931 Vsig10D3YX43 558 aa25.32■■□□□ 1.64
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms