RNA–Protein interactions for RNA: YKR063C

LAS1, Transcript of Protein required for pre-rRNA processing at both ends of ITS2, yeast

Gene LAS1, Length 1,509 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LAS1	YKR063C	PFK1	P16861	987 aa	Known RBP	4.59	□□□□□ -1.67
LAS1	YKR063C	OCT1	P35999	772 aa		4.59	□□□□□ -1.67
LAS1	YKR063C	YKR018C	P36114	725 aa		4.59	□□□□□ -1.67
LAS1	YKR063C	PIH1	P38768	344 aa		4.59	□□□□□ -1.67
LAS1	YKR063C	SMC2	P38989	1170 aa	Known RBP	4.59	□□□□□ -1.67
LAS1	YKR063C	TOS3	P43637	560 aa		4.59	□□□□□ -1.67
LAS1	YKR063C	HUL5	P53119	910 aa		4.59	□□□□□ -1.67
LAS1	YKR063C	LIF1	P53150	421 aa		4.59	□□□□□ -1.67
LAS1	YKR063C	FUS2	Q05670	677 aa		4.59	□□□□□ -1.67
LAS1	YKR063C	OPY2	Q06810	360 aa		4.59	□□□□□ -1.67
LAS1	YKR063C	YOL075C	Q08234	1294 aa		4.59	□□□□□ -1.67
LAS1	YKR063C	YPL216W	Q08964	1102 aa		4.59	□□□□□ -1.67
LAS1	YKR063C	GIN4	Q12263	1142 aa		4.59	□□□□□ -1.67
LAS1	YKR063C	YLR278C	Q05854	1341 aa		4.59	□□□□□ -1.68
LAS1	YKR063C	SPE1	P08432	466 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	SRD1	P09007	221 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	MTF2	P10849	440 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	PER1	P25625	357 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	CDC60	P26637	1090 aa	Known RBP	4.58	□□□□□ -1.68
LAS1	YKR063C	STO1	P34160	861 aa	Known RBP	4.58	□□□□□ -1.68
LAS1	YKR063C	RPC25	P35718	212 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	PXL1	P36166	706 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	NDT80	P38830	627 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	VAB2	P40003	282 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	VFA1	P40080	203 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	NDC80	P40460	691 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	ERG5	P54781	538 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	ORC4	P54791	529 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	SRP1	Q02821	542 aa	Known RBP	4.58	□□□□□ -1.68
LAS1	YKR063C	SHE9	Q04172	456 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	MED1	Q12321	566 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	ARP6	Q12509	438 aa		4.58	□□□□□ -1.68
LAS1	YKR063C	TY1B-A	O13527	1196 aa	Known RBP	4.57	□□□□□ -1.68
LAS1	YKR063C	PGK1	P00560	416 aa	Known RBP	4.57	□□□□□ -1.68
LAS1	YKR063C	SWI6	P09959	803 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	PCK1	P10963	549 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	SSB1	P11484	613 aa	Known RBP	4.57	□□□□□ -1.68
LAS1	YKR063C	CLN3	P13365	580 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	SRB4	P32569	687 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	YEL043W	P32618	956 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	PEA2	P40091	420 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	SSB2	P40150	613 aa	Known RBP	4.57	□□□□□ -1.68
LAS1	YKR063C	SHQ1	P40486	507 aa	Predicted RBP	4.57	□□□□□ -1.68
LAS1	YKR063C	HUL4	P40985	892 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	CHA4	P43634	648 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
LAS1	YKR063C	COS5	P47187	383 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	VID30	P53076	958 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	CAF130	P53280	1122 aa	Predicted RBP	4.57	□□□□□ -1.68
LAS1	YKR063C	UME1	Q03010	460 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	GIR2	Q03768	265 aa	Predicted RBP	4.57	□□□□□ -1.68
LAS1	YKR063C	PHM6	Q05637	104 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	WHI4	Q07655	649 aa	Known RBP	4.57	□□□□□ -1.68
LAS1	YKR063C	GUD1	Q07729	489 aa		4.57	□□□□□ -1.68
LAS1	YKR063C	NEW1	Q08972	1196 aa	Known RBP	4.57	□□□□□ -1.68
LAS1	YKR063C	CWC2	Q12046	339 aa	Predicted RBP	4.57	□□□□□ -1.68
LAS1	YKR063C	SAM1	P10659	382 aa	Known RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	HSF1	P10961	833 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	SPO12	P17123	173 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	UBC1	P21734	215 aa	Known RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	DPB3	P27344	201 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	STE5	P32917	917 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	NIP100	P33420	868 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	SEC9	P40357	651 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	CCM1	P48237	864 aa	Predicted RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	NBP1	P52919	319 aa	Predicted RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	ZPR1	P53303	486 aa	Known RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	RBA50	Q04418	439 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	SML1	Q04964	104 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	SPH1	Q06160	661 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	YPR078C	Q06813	372 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	TCO89	Q08921	799 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	KCS1	Q12494	1050 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	NOP14	Q99207	810 aa	Known RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
LAS1	YKR063C	FBP1	P09201	348 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	TCP1	P12612	559 aa	Known RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	NPP1	P25353	742 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	XRS2	P33301	854 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	LTV1	P34078	463 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	TGL1	P34163	548 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	RRP1	P35178	278 aa	Predicted RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	MCD4	P36051	919 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	PAM1	P37304	830 aa	Known RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	UBP13	P38187	747 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	CCC2	P38995	1004 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	SPF1	P39986	1215 aa	Known RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	GPD2	P41911	440 aa	Known RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	IES1	P43579	692 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	RRT6	P53117	311 aa	Predicted RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	MAL13	P53338	473 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	DIP5	P53388	608 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	TOF1	P53840	1238 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	NCS2	P53923	493 aa	Predicted RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	TMA64	Q04600	565 aa	Known RBP	4.56	□□□□□ -1.68
LAS1	YKR063C	CUR1	Q06469	252 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	UBX5	Q06682	500 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	VAC14	Q06708	880 aa		4.56	□□□□□ -1.68
LAS1	YKR063C	TOM70	P07213	617 aa	Known RBP	4.55	□□□□□ -1.68
LAS1	YKR063C	PPR1	P07272	904 aa	Predicted RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms