Protein–RNA interactions for Protein: P11484

SSB1, Ribosome-associated molecular chaperone SSB1, yeastyeast

Known RBP Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSB1P11484 YML009W-BYML009W-B 477 nt22.11■■□□□ 1.13
SSB1P11484 NSR1YGR159C 1245 nt22.1■■□□□ 1.13
SSB1P11484 NOP1YDL014W 984 nt21.56■■□□□ 1.04
SSB1P11484 YKL036CYKL036C 393 nt19.99■□□□□ 0.79
SSB1P11484 MDJ1YFL016C 1536 nt19.81■□□□□ 0.76
SSB1P11484 Q0297Q0297 156 nt18.87■□□□□ 0.61
SSB1P11484 SRX1YKL086W 384 nt18.81■□□□□ 0.6
SSB1P11484 YJL027CYJL027C 417 nt18.69■□□□□ 0.58
SSB1P11484 SCS3YGL126W 1143 nt18.22■□□□□ 0.51
SSB1P11484 YCR051WYCR051W 669 nt17.87■□□□□ 0.45
SSB1P11484 DBP2YNL112W 1641 nt17.44■□□□□ 0.38
SSB1P11484 YOL085CYOL085C 342 nt17.29■□□□□ 0.36
SSB1P11484 TRN1tP(UGG)A 72 nt17.01■□□□□ 0.31
SSB1P11484 SUF9tP(UGG)F 72 nt17.01■□□□□ 0.31
SSB1P11484 SUF8tP(UGG)H 72 nt17.01■□□□□ 0.31
SSB1P11484 tP(UGG)LtP(UGG)L 72 nt17.01■□□□□ 0.31
SSB1P11484 SUF7tP(UGG)M 72 nt17.01■□□□□ 0.31
SSB1P11484 tP(UGG)N1tP(UGG)N1 72 nt17.01■□□□□ 0.31
SSB1P11484 tP(UGG)N2tP(UGG)N2 72 nt17.01■□□□□ 0.31
SSB1P11484 tP(UGG)O1tP(UGG)O1 72 nt17.01■□□□□ 0.31
SSB1P11484 SUF11tP(UGG)O2 72 nt17.01■□□□□ 0.31
SSB1P11484 PKP1YIL042C 1185 nt17■□□□□ 0.31
SSB1P11484 RPP1BYDL130W 321 nt16.94■□□□□ 0.3
SSB1P11484 YBR190WYBR190W 312 nt16.91■□□□□ 0.3
SSB1P11484 CCC1YLR220W 969 nt16.87■□□□□ 0.29
SSB1P11484 RTC3YHR087W 336 nt16.55■□□□□ 0.24
SSB1P11484 RVS167YDR388W 1449 nt16.36■□□□□ 0.21
SSB1P11484 ATS1YAL020C 1002 nt16.35■□□□□ 0.21
SSB1P11484 SCJ1YMR214W 1134 nt16.35■□□□□ 0.21
SSB1P11484 PET122YER153C 765 nt16.14■□□□□ 0.17
SSB1P11484 SCR1SCR1 522 nt16.07■□□□□ 0.16
SSB1P11484 tP(UGG)O3tP(UGG)O3 72 nt16.05■□□□□ 0.16
SSB1P11484 SHR5YOL110W 714 nt15.75■□□□□ 0.11
SSB1P11484 RRN5YLR141W 1092 nt15.71■□□□□ 0.11
SSB1P11484 YDJ1YNL064C 1230 nt15.53■□□□□ 0.08
SSB1P11484 PUT4YOR348C 1884 nt15.49■□□□□ 0.07
SSB1P11484 RSB1YOR049C 1065 nt15.44■□□□□ 0.06
SSB1P11484 URN1YPR152C 1398 nt15.43■□□□□ 0.06
SSB1P11484 Q0182Q0182 405 nt15.42■□□□□ 0.06
SSB1P11484 YER088W-BYER088W-B 147 nt15.39■□□□□ 0.05
SSB1P11484 DEP1YAL013W 1218 nt15.39■□□□□ 0.05
SSB1P11484 GAR1YHR089C 618 nt15.22■□□□□ 0.03
SSB1P11484 OPI9YLR338W 858 nt15.22■□□□□ 0.03
SSB1P11484 SAH1YER043C 1350 nt15.2■□□□□ 0.02
SSB1P11484 ARE1YCR048W 1833 nt15.17■□□□□ 0.02
SSB1P11484 RPN10YHR200W 807 nt15.14■□□□□ 0.01
SSB1P11484 PST2YDR032C 597 nt15.11■□□□□ 0.01
SSB1P11484 YNL208WYNL208W 600 nt15.11■□□□□ 0.01
SSB1P11484 POA1YBR022W 534 nt15.02■□□□□ -0
SSB1P11484 YHR049C-AYHR049C-A 297 nt14.98□□□□□ -0.01
SSB1P11484 SSA3YBL075C 1950 nt14.81□□□□□ -0.04
SSB1P11484 PUN1YLR414C 792 nt14.78□□□□□ -0.04
SSB1P11484 MOT3YMR070W 1473 nt14.73□□□□□ -0.05
SSB1P11484 BSC6YOL137W 1494 nt14.71□□□□□ -0.05
SSB1P11484 TIR1YER011W 765 nt14.7□□□□□ -0.06
SSB1P11484 YJR018WYJR018W 363 nt14.7□□□□□ -0.06
SSB1P11484 PTC2YER089C 1395 nt14.65□□□□□ -0.06
SSB1P11484 BUD23YCR047C 828 nt14.63□□□□□ -0.07
SSB1P11484 YKL097CYKL097C 411 nt14.6□□□□□ -0.07
SSB1P11484 SSA1YAL005C 1929 nt14.57□□□□□ -0.08
SSB1P11484 NAB2YGL122C 1578 nt14.46□□□□□ -0.09
SSB1P11484 SHU1YHL006C 453 nt14.45□□□□□ -0.1
SSB1P11484 YJR120WYJR120W 351 nt14.45□□□□□ -0.1
SSB1P11484 RPP2BYDR382W 333 nt14.35□□□□□ -0.11
SSB1P11484 SRB2YHR041C 633 nt14.31□□□□□ -0.12
SSB1P11484 DAL1YIR027C 1383 nt14.24□□□□□ -0.13
SSB1P11484 FIS1YIL065C 468 nt14.24□□□□□ -0.13
SSB1P11484 FPR4YLR449W 1179 nt14.24□□□□□ -0.13
SSB1P11484 YAL037C-BYAL037C-B 975 nt14.2□□□□□ -0.14
SSB1P11484 INM2YDR287W 879 nt14.19□□□□□ -0.14
SSB1P11484 PHO4YFR034C 939 nt14.12□□□□□ -0.15
SSB1P11484 SPT5YML010W 3192 nt14.11□□□□□ -0.15
SSB1P11484 WWM1YFL010C 636 nt14.04□□□□□ -0.16
SSB1P11484 BDH2YAL061W 1254 nt14.04□□□□□ -0.16
SSB1P11484 YBL100CYBL100C 315 nt14.04□□□□□ -0.16
SSB1P11484 YGR021WYGR021W 873 nt14□□□□□ -0.17
SSB1P11484 YOR139CYOR139C 393 nt13.95□□□□□ -0.18
SSB1P11484 HOM6YJR139C 1080 nt13.92□□□□□ -0.18
SSB1P11484 YPS1YLR120C 1710 nt13.89□□□□□ -0.19
SSB1P11484 FUN26YAL022C 1554 nt13.87□□□□□ -0.19
SSB1P11484 NPL3YDR432W 1245 nt13.86□□□□□ -0.19
SSB1P11484 MNP1YGL068W 585 nt13.86□□□□□ -0.19
SSB1P11484 MEP2YNL142W 1500 nt13.82□□□□□ -0.2
SSB1P11484 YFL021C-AYFL021C-A 855 nt13.81□□□□□ -0.2
SSB1P11484 LSM3YLR438C-A 270 nt13.81□□□□□ -0.2
SSB1P11484 TRM9YML014W 840 nt13.81□□□□□ -0.2
SSB1P11484 YDR095CYDR095C 411 nt13.78□□□□□ -0.2
SSB1P11484 YHR165W-AYHR165W-A 312 nt13.77□□□□□ -0.21
SSB1P11484 RKM5YLR137W 1104 nt13.73□□□□□ -0.21
SSB1P11484 YOL037CYOL037C 354 nt13.73□□□□□ -0.21
SSB1P11484 ALF1YNL148C 765 nt13.71□□□□□ -0.21
SSB1P11484 SSA4YER103W 1929 nt13.68□□□□□ -0.22
SSB1P11484 CCT6YDR188W 1641 nt13.67□□□□□ -0.22
SSB1P11484 DCW1YKL046C 1350 nt13.61□□□□□ -0.23
SSB1P11484 SUF2tP(AGG)C 72 nt13.57□□□□□ -0.24
SSB1P11484 SUF10tP(AGG)N 72 nt13.57□□□□□ -0.24
SSB1P11484 RPP2AYOL039W 321 nt13.52□□□□□ -0.25
SSB1P11484 SIS1YNL007C 1059 nt13.5□□□□□ -0.25
SSB1P11484 PTP1YDL230W 1008 nt13.49□□□□□ -0.25
SSB1P11484 EMI2YDR516C 1503 nt13.44□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 8.1 ms