Protein–RNA interactions for Protein: P53150

LIF1, Ligase-interacting factor 1, yeastyeast

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LIF1P53150 YML009W-BYML009W-B 477 nt23.2■■□□□ 1.3
LIF1P53150 NSR1YGR159C 1245 nt22.82■■□□□ 1.24
LIF1P53150 NOP1YDL014W 984 nt22.65■■□□□ 1.22
LIF1P53150 YKL036CYKL036C 393 nt21.13■□□□□ 0.97
LIF1P53150 MDJ1YFL016C 1536 nt20.03■□□□□ 0.8
LIF1P53150 Q0297Q0297 156 nt19.89■□□□□ 0.77
LIF1P53150 YJL027CYJL027C 417 nt19.79■□□□□ 0.76
LIF1P53150 SRX1YKL086W 384 nt19.78■□□□□ 0.76
LIF1P53150 SCS3YGL126W 1143 nt19.35■□□□□ 0.69
LIF1P53150 YCR051WYCR051W 669 nt18.82■□□□□ 0.6
LIF1P53150 YOL085CYOL085C 342 nt18.3■□□□□ 0.52
LIF1P53150 PKP1YIL042C 1185 nt18.01■□□□□ 0.47
LIF1P53150 RPP1BYDL130W 321 nt17.86■□□□□ 0.45
LIF1P53150 DBP2YNL112W 1641 nt17.8■□□□□ 0.44
LIF1P53150 TRN1tP(UGG)A 72 nt17.72■□□□□ 0.43
LIF1P53150 SUF9tP(UGG)F 72 nt17.72■□□□□ 0.43
LIF1P53150 SUF8tP(UGG)H 72 nt17.72■□□□□ 0.43
LIF1P53150 tP(UGG)LtP(UGG)L 72 nt17.72■□□□□ 0.43
LIF1P53150 SUF7tP(UGG)M 72 nt17.72■□□□□ 0.43
LIF1P53150 tP(UGG)N1tP(UGG)N1 72 nt17.72■□□□□ 0.43
LIF1P53150 tP(UGG)N2tP(UGG)N2 72 nt17.72■□□□□ 0.43
LIF1P53150 tP(UGG)O1tP(UGG)O1 72 nt17.72■□□□□ 0.43
LIF1P53150 SUF11tP(UGG)O2 72 nt17.72■□□□□ 0.43
LIF1P53150 CCC1YLR220W 969 nt17.6■□□□□ 0.41
LIF1P53150 SCJ1YMR214W 1134 nt17.45■□□□□ 0.38
LIF1P53150 ATS1YAL020C 1002 nt17.38■□□□□ 0.37
LIF1P53150 PET122YER153C 765 nt17.03■□□□□ 0.32
LIF1P53150 YBR190WYBR190W 312 nt17■□□□□ 0.31
LIF1P53150 SCR1SCR1 522 nt16.94■□□□□ 0.3
LIF1P53150 tP(UGG)O3tP(UGG)O3 72 nt16.86■□□□□ 0.29
LIF1P53150 RVS167YDR388W 1449 nt16.83■□□□□ 0.28
LIF1P53150 RTC3YHR087W 336 nt16.68■□□□□ 0.26
LIF1P53150 RRN5YLR141W 1092 nt16.58■□□□□ 0.24
LIF1P53150 RSB1YOR049C 1065 nt16.32■□□□□ 0.2
LIF1P53150 YDJ1YNL064C 1230 nt16.3■□□□□ 0.2
LIF1P53150 SHR5YOL110W 714 nt16.28■□□□□ 0.2
LIF1P53150 YER088W-BYER088W-B 147 nt16.25■□□□□ 0.19
LIF1P53150 PST2YDR032C 597 nt16.05■□□□□ 0.16
LIF1P53150 GAR1YHR089C 618 nt15.93■□□□□ 0.14
LIF1P53150 DEP1YAL013W 1218 nt15.77■□□□□ 0.12
LIF1P53150 URN1YPR152C 1398 nt15.69■□□□□ 0.1
LIF1P53150 YKL097CYKL097C 411 nt15.56■□□□□ 0.08
LIF1P53150 YNL208WYNL208W 600 nt15.53■□□□□ 0.08
LIF1P53150 RPN10YHR200W 807 nt15.51■□□□□ 0.07
LIF1P53150 OPI9YLR338W 858 nt15.39■□□□□ 0.05
LIF1P53150 TIR1YER011W 765 nt15.38■□□□□ 0.05
LIF1P53150 SHU1YHL006C 453 nt15.34■□□□□ 0.05
LIF1P53150 SAH1YER043C 1350 nt15.24■□□□□ 0.03
LIF1P53150 PUT4YOR348C 1884 nt15.23■□□□□ 0.03
LIF1P53150 SSA1YAL005C 1929 nt15.13■□□□□ 0.01
LIF1P53150 YAL037C-BYAL037C-B 975 nt15.05■□□□□ -0
LIF1P53150 ARE1YCR048W 1833 nt15.04■□□□□ -0
LIF1P53150 YJR018WYJR018W 363 nt14.98□□□□□ -0.01
LIF1P53150 PUN1YLR414C 792 nt14.95□□□□□ -0.02
LIF1P53150 SRB2YHR041C 633 nt14.92□□□□□ -0.02
LIF1P53150 YOR139CYOR139C 393 nt14.88□□□□□ -0.03
LIF1P53150 YHR049C-AYHR049C-A 297 nt14.85□□□□□ -0.03
LIF1P53150 POA1YBR022W 534 nt14.81□□□□□ -0.04
LIF1P53150 YJR120WYJR120W 351 nt14.77□□□□□ -0.05
LIF1P53150 RPP2BYDR382W 333 nt14.76□□□□□ -0.05
LIF1P53150 PTC2YER089C 1395 nt14.74□□□□□ -0.05
LIF1P53150 WWM1YFL010C 636 nt14.74□□□□□ -0.05
LIF1P53150 NPL3YDR432W 1245 nt14.72□□□□□ -0.05
LIF1P53150 YGR021WYGR021W 873 nt14.72□□□□□ -0.05
LIF1P53150 HOM6YJR139C 1080 nt14.68□□□□□ -0.06
LIF1P53150 MNP1YGL068W 585 nt14.66□□□□□ -0.06
LIF1P53150 BUD23YCR047C 828 nt14.56□□□□□ -0.08
LIF1P53150 YOL037CYOL037C 354 nt14.51□□□□□ -0.09
LIF1P53150 NAB2YGL122C 1578 nt14.5□□□□□ -0.09
LIF1P53150 YFL021C-AYFL021C-A 855 nt14.49□□□□□ -0.09
LIF1P53150 BDH2YAL061W 1254 nt14.49□□□□□ -0.09
LIF1P53150 RKM5YLR137W 1104 nt14.47□□□□□ -0.09
LIF1P53150 SSA3YBL075C 1950 nt14.43□□□□□ -0.1
LIF1P53150 BSC6YOL137W 1494 nt14.42□□□□□ -0.1
LIF1P53150 INM2YDR287W 879 nt14.41□□□□□ -0.1
LIF1P53150 FPR4YLR449W 1179 nt14.37□□□□□ -0.11
LIF1P53150 DAL1YIR027C 1383 nt14.36□□□□□ -0.11
LIF1P53150 LSM3YLR438C-A 270 nt14.35□□□□□ -0.11
LIF1P53150 YBL100CYBL100C 315 nt14.32□□□□□ -0.12
LIF1P53150 FIS1YIL065C 468 nt14.3□□□□□ -0.12
LIF1P53150 tM(CAU)CtM(CAU)C 72 nt14.29□□□□□ -0.12
LIF1P53150 IMT4tM(CAU)E 72 nt14.29□□□□□ -0.12
LIF1P53150 IMT3tM(CAU)J3 72 nt14.29□□□□□ -0.12
LIF1P53150 IMT1tM(CAU)O1 72 nt14.29□□□□□ -0.12
LIF1P53150 IMT2tM(CAU)P 72 nt14.29□□□□□ -0.12
LIF1P53150 PHO4YFR034C 939 nt14.22□□□□□ -0.13
LIF1P53150 TRM9YML014W 840 nt14.2□□□□□ -0.14
LIF1P53150 FUN26YAL022C 1554 nt14.16□□□□□ -0.14
LIF1P53150 YLR281CYLR281C 468 nt14.15□□□□□ -0.14
LIF1P53150 PUS2YGL063W 1113 nt14.12□□□□□ -0.15
LIF1P53150 WHI5YOR083W 888 nt14.08□□□□□ -0.16
LIF1P53150 CCT6YDR188W 1641 nt14.01□□□□□ -0.17
LIF1P53150 ALF1YNL148C 765 nt13.92□□□□□ -0.18
LIF1P53150 SUF2tP(AGG)C 72 nt13.88□□□□□ -0.19
LIF1P53150 SUF10tP(AGG)N 72 nt13.88□□□□□ -0.19
LIF1P53150 YLR154C-GYLR154C-G 150 nt13.88□□□□□ -0.19
LIF1P53150 YPS1YLR120C 1710 nt13.84□□□□□ -0.19
LIF1P53150 MOT3YMR070W 1473 nt13.82□□□□□ -0.2
LIF1P53150 DSK2YMR276W 1122 nt13.82□□□□□ -0.2
LIF1P53150 YDR095CYDR095C 411 nt13.8□□□□□ -0.2
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms