Protein–RNA interactions for Protein: P40985

HUL4, Probable E3 ubiquitin-protein ligase HUL4, yeastyeast

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HUL4P40985 YML009W-BYML009W-B 477 nt22.48■■□□□ 1.19
HUL4P40985 NSR1YGR159C 1245 nt22.3■■□□□ 1.16
HUL4P40985 NOP1YDL014W 984 nt21.73■■□□□ 1.07
HUL4P40985 YKL036CYKL036C 393 nt20.03■□□□□ 0.8
HUL4P40985 MDJ1YFL016C 1536 nt19.98■□□□□ 0.79
HUL4P40985 Q0297Q0297 156 nt19.01■□□□□ 0.63
HUL4P40985 SRX1YKL086W 384 nt19.01■□□□□ 0.63
HUL4P40985 YJL027CYJL027C 417 nt18.72■□□□□ 0.59
HUL4P40985 SCS3YGL126W 1143 nt18.33■□□□□ 0.52
HUL4P40985 YCR051WYCR051W 669 nt18.09■□□□□ 0.49
HUL4P40985 DBP2YNL112W 1641 nt17.62■□□□□ 0.41
HUL4P40985 YOL085CYOL085C 342 nt17.38■□□□□ 0.37
HUL4P40985 TRN1tP(UGG)A 72 nt17.25■□□□□ 0.35
HUL4P40985 SUF9tP(UGG)F 72 nt17.25■□□□□ 0.35
HUL4P40985 SUF8tP(UGG)H 72 nt17.25■□□□□ 0.35
HUL4P40985 tP(UGG)LtP(UGG)L 72 nt17.25■□□□□ 0.35
HUL4P40985 SUF7tP(UGG)M 72 nt17.25■□□□□ 0.35
HUL4P40985 tP(UGG)N1tP(UGG)N1 72 nt17.25■□□□□ 0.35
HUL4P40985 tP(UGG)N2tP(UGG)N2 72 nt17.25■□□□□ 0.35
HUL4P40985 tP(UGG)O1tP(UGG)O1 72 nt17.25■□□□□ 0.35
HUL4P40985 SUF11tP(UGG)O2 72 nt17.25■□□□□ 0.35
HUL4P40985 PKP1YIL042C 1185 nt17.2■□□□□ 0.34
HUL4P40985 CCC1YLR220W 969 nt17.15■□□□□ 0.34
HUL4P40985 SCJ1YMR214W 1134 nt17.11■□□□□ 0.33
HUL4P40985 RPP1BYDL130W 321 nt17.08■□□□□ 0.32
HUL4P40985 YBR190WYBR190W 312 nt16.95■□□□□ 0.3
HUL4P40985 RTC3YHR087W 336 nt16.64■□□□□ 0.25
HUL4P40985 ATS1YAL020C 1002 nt16.6■□□□□ 0.25
HUL4P40985 RVS167YDR388W 1449 nt16.49■□□□□ 0.23
HUL4P40985 PET122YER153C 765 nt16.38■□□□□ 0.21
HUL4P40985 tP(UGG)O3tP(UGG)O3 72 nt16.31■□□□□ 0.2
HUL4P40985 SCR1SCR1 522 nt16.13■□□□□ 0.17
HUL4P40985 SHR5YOL110W 714 nt15.91■□□□□ 0.14
HUL4P40985 RRN5YLR141W 1092 nt15.89■□□□□ 0.13
HUL4P40985 SSA3YBL075C 1950 nt15.87■□□□□ 0.13
HUL4P40985 YDJ1YNL064C 1230 nt15.72■□□□□ 0.11
HUL4P40985 DEP1YAL013W 1218 nt15.58■□□□□ 0.08
HUL4P40985 YER088W-BYER088W-B 147 nt15.57■□□□□ 0.08
HUL4P40985 URN1YPR152C 1398 nt15.55■□□□□ 0.08
HUL4P40985 RSB1YOR049C 1065 nt15.55■□□□□ 0.08
HUL4P40985 PUT4YOR348C 1884 nt15.5■□□□□ 0.07
HUL4P40985 GAR1YHR089C 618 nt15.47■□□□□ 0.07
HUL4P40985 OPI9YLR338W 858 nt15.29■□□□□ 0.04
HUL4P40985 SAH1YER043C 1350 nt15.27■□□□□ 0.04
HUL4P40985 PST2YDR032C 597 nt15.24■□□□□ 0.03
HUL4P40985 RPN10YHR200W 807 nt15.23■□□□□ 0.03
HUL4P40985 YNL208WYNL208W 600 nt15.23■□□□□ 0.03
HUL4P40985 ARE1YCR048W 1833 nt15.2■□□□□ 0.02
HUL4P40985 YKL097CYKL097C 411 nt15.03■□□□□ -0
HUL4P40985 POA1YBR022W 534 nt15.03■□□□□ -0
HUL4P40985 YHR049C-AYHR049C-A 297 nt15.02■□□□□ -0
HUL4P40985 TIR1YER011W 765 nt14.92□□□□□ -0.02
HUL4P40985 PUN1YLR414C 792 nt14.83□□□□□ -0.04
HUL4P40985 YJR018WYJR018W 363 nt14.81□□□□□ -0.04
HUL4P40985 SSA1YAL005C 1929 nt14.79□□□□□ -0.04
HUL4P40985 BSC6YOL137W 1494 nt14.76□□□□□ -0.05
HUL4P40985 PTC2YER089C 1395 nt14.72□□□□□ -0.05
HUL4P40985 BUD23YCR047C 828 nt14.68□□□□□ -0.06
HUL4P40985 YJR120WYJR120W 351 nt14.62□□□□□ -0.07
HUL4P40985 SRB2YHR041C 633 nt14.6□□□□□ -0.07
HUL4P40985 SHU1YHL006C 453 nt14.52□□□□□ -0.09
HUL4P40985 SPT5YML010W 3192 nt14.51□□□□□ -0.09
HUL4P40985 NAB2YGL122C 1578 nt14.49□□□□□ -0.09
HUL4P40985 RPP2BYDR382W 333 nt14.46□□□□□ -0.09
HUL4P40985 Q0182Q0182 405 nt14.4□□□□□ -0.1
HUL4P40985 YAL037C-BYAL037C-B 975 nt14.37□□□□□ -0.11
HUL4P40985 FPR4YLR449W 1179 nt14.34□□□□□ -0.11
HUL4P40985 FIS1YIL065C 468 nt14.33□□□□□ -0.12
HUL4P40985 DAL1YIR027C 1383 nt14.3□□□□□ -0.12
HUL4P40985 WWM1YFL010C 636 nt14.29□□□□□ -0.12
HUL4P40985 SSA4YER103W 1929 nt14.26□□□□□ -0.13
HUL4P40985 INM2YDR287W 879 nt14.24□□□□□ -0.13
HUL4P40985 YOR139CYOR139C 393 nt14.22□□□□□ -0.13
HUL4P40985 PHO4YFR034C 939 nt14.19□□□□□ -0.14
HUL4P40985 BDH2YAL061W 1254 nt14.17□□□□□ -0.14
HUL4P40985 YBL100CYBL100C 315 nt14.15□□□□□ -0.14
HUL4P40985 YGR021WYGR021W 873 nt14.1□□□□□ -0.15
HUL4P40985 HOM6YJR139C 1080 nt14.1□□□□□ -0.15
HUL4P40985 MNP1YGL068W 585 nt14.09□□□□□ -0.15
HUL4P40985 NPL3YDR432W 1245 nt14.07□□□□□ -0.16
HUL4P40985 YFL021C-AYFL021C-A 855 nt13.99□□□□□ -0.17
HUL4P40985 FUN26YAL022C 1554 nt13.99□□□□□ -0.17
HUL4P40985 LSM3YLR438C-A 270 nt13.94□□□□□ -0.18
HUL4P40985 TRM9YML014W 840 nt13.92□□□□□ -0.18
HUL4P40985 YPS1YLR120C 1710 nt13.92□□□□□ -0.18
HUL4P40985 RKM5YLR137W 1104 nt13.9□□□□□ -0.18
HUL4P40985 MEP2YNL142W 1500 nt13.9□□□□□ -0.19
HUL4P40985 MOT3YMR070W 1473 nt13.88□□□□□ -0.19
HUL4P40985 YDR095CYDR095C 411 nt13.81□□□□□ -0.2
HUL4P40985 YHR165W-AYHR165W-A 312 nt13.79□□□□□ -0.2
HUL4P40985 ALF1YNL148C 765 nt13.78□□□□□ -0.2
HUL4P40985 CCT6YDR188W 1641 nt13.77□□□□□ -0.21
HUL4P40985 BDF1YLR399C 2061 nt13.77□□□□□ -0.21
HUL4P40985 YOL037CYOL037C 354 nt13.73□□□□□ -0.21
HUL4P40985 DCW1YKL046C 1350 nt13.72□□□□□ -0.21
HUL4P40985 tM(CAU)CtM(CAU)C 72 nt13.65□□□□□ -0.22
HUL4P40985 IMT4tM(CAU)E 72 nt13.65□□□□□ -0.22
HUL4P40985 IMT3tM(CAU)J3 72 nt13.65□□□□□ -0.22
HUL4P40985 IMT1tM(CAU)O1 72 nt13.65□□□□□ -0.22
HUL4P40985 IMT2tM(CAU)P 72 nt13.65□□□□□ -0.22
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms