RNA–Protein interactions for RNA: YGR161C-D

YGR161C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR161C-D, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR161C-DYGR161C-D SEC9P40357 651 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D ALR2P43553 858 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D PRP24P49960 444 aaKnown RBP2.78□□□□□ -1.96
YGR161C-DYGR161C-D HOS3Q02959 697 aaKnown RBP2.78□□□□□ -1.96
YGR161C-DYGR161C-D SRL4Q03085 281 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D YPQ2Q06328 317 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D SLK19Q08581 821 aaKnown RBP2.78□□□□□ -1.96
YGR161C-DYGR161C-D YLL054CQ12244 843 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D MET2P08465 486 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D SRD1P09007 221 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D MAS2P11914 482 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D MSS51P32335 436 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D SSH4P32343 579 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D MED6P38782 295 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D LSB6P42951 607 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D GOR1P53839 350 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D MZM1Q03429 123 aaPredicted RBP2.78□□□□□ -1.96
YGR161C-DYGR161C-D TSA2Q04120 196 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D MCM16Q12262 181 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D TRM11Q12463 433 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D NHA1Q99271 985 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D PEP1P32319 1579 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D AEP2P22136 580 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D PRP22P24384 1145 aaKnown RBP2.78□□□□□ -1.96
YGR161C-DYGR161C-D SPS22P25380 463 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D SKI2P35207 1287 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
YGR161C-DYGR161C-D ATG12P38316 186 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D MSS4P38994 779 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D TPA1P40032 644 aaKnown RBP2.78□□□□□ -1.96
YGR161C-DYGR161C-D RGI2P40188 164 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D IRC6P43615 237 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D YGL108CP53139 140 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D RPT6Q01939 405 aaKnown RBP2.78□□□□□ -1.96
YGR161C-DYGR161C-D RPM2Q02773 1202 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D RLI1Q03195 608 aaKnown RBP2.78□□□□□ -1.96
YGR161C-DYGR161C-D INM2Q05533 292 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D TAZ1Q06510 381 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D ZIP1P31111 875 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D TIF4631P39935 952 aaKnown RBP2.78□□□□□ -1.96
YGR161C-DYGR161C-D YGL138CP53122 345 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D ULP1Q02724 621 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D WAR1Q03631 944 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D SHS1Q07657 551 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D GAS5Q08193 484 aa2.78□□□□□ -1.96
YGR161C-DYGR161C-D LEU9Q12166 604 aaKnown RBP2.78□□□□□ -1.96
YGR161C-DYGR161C-D PDR5P33302 1511 aaKnown RBP2.78□□□□□ -1.96
YGR161C-DYGR161C-D COX13P32799 129 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D LRP1P38801 184 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D SPF1P39986 1215 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D SBE2P42223 864 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D ROK1P45818 564 aaPredicted RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D SSY5P47002 699 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D APS3P47064 194 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D BET4Q00618 327 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D SND1Q04007 877 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D POB3Q04636 552 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D GTT2Q12390 233 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D PNO1Q99216 274 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D MLP2P40457 1679 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D YMR084WA2P2R3 262 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D HIS1P00498 297 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D RPS8AP0CX39 200 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D RPS8BP0CX40 200 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D PHO8P11491 566 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D MSH2P25847 964 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D YKT6P36015 200 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D BYE1P36106 594 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D MMS4P38257 691 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D NDC80P40460 691 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D LYS5P50113 272 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D YNR021WP53723 404 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D VPS30Q02948 557 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D RVB1Q03940 463 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D KRE28Q04431 385 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D DIT2P21595 489 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D NFU1P32860 256 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D LIP5P32875 414 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D PTH2P34222 208 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D TVP38P36164 337 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D JNM1P36224 373 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D SIP5P40210 489 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D SEC27P41811 889 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D YGR237CP50089 785 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D SDT1P53078 280 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D YGR117CP53270 476 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D YNL143CP53908 130 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D EGD1Q02642 157 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D LEE1Q02799 301 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D LDB18Q07887 179 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D RGT2Q12300 763 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D CTF3Q12748 733 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D COX2P00410 251 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D NAT1P12945 854 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D RIT1P23796 513 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D RAD27P26793 382 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D CDC3P32457 520 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D SLA2P33338 968 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D ERT1P38140 529 aa2.77□□□□□ -1.97
YGR161C-DYGR161C-D PRS3P38689 320 aaKnown RBP2.77□□□□□ -1.97
YGR161C-DYGR161C-D RTC3P38804 111 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms