Protein–RNA interactions for Protein: P47064

APS3, AP-3 complex subunit sigma, yeastyeast

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
APS3P47064 YML009W-BYML009W-B 477 nt18.94■□□□□ 0.62
APS3P47064 NSR1YGR159C 1245 nt18.86■□□□□ 0.61
APS3P47064 NOP1YDL014W 984 nt18.53■□□□□ 0.56
APS3P47064 YKL036CYKL036C 393 nt17.05■□□□□ 0.32
APS3P47064 MDJ1YFL016C 1536 nt16.61■□□□□ 0.25
APS3P47064 Q0297Q0297 156 nt16.16■□□□□ 0.18
APS3P47064 SRX1YKL086W 384 nt16.12■□□□□ 0.17
APS3P47064 YJL027CYJL027C 417 nt15.92■□□□□ 0.14
APS3P47064 SCS3YGL126W 1143 nt15.46■□□□□ 0.07
APS3P47064 YCR051WYCR051W 669 nt15.29■□□□□ 0.04
APS3P47064 YOL085CYOL085C 342 nt14.73□□□□□ -0.05
APS3P47064 DBP2YNL112W 1641 nt14.68□□□□□ -0.06
APS3P47064 TRN1tP(UGG)A 72 nt14.53□□□□□ -0.08
APS3P47064 SUF9tP(UGG)F 72 nt14.53□□□□□ -0.08
APS3P47064 SUF8tP(UGG)H 72 nt14.53□□□□□ -0.08
APS3P47064 tP(UGG)LtP(UGG)L 72 nt14.53□□□□□ -0.08
APS3P47064 SUF7tP(UGG)M 72 nt14.53□□□□□ -0.08
APS3P47064 tP(UGG)N1tP(UGG)N1 72 nt14.53□□□□□ -0.08
APS3P47064 tP(UGG)N2tP(UGG)N2 72 nt14.53□□□□□ -0.08
APS3P47064 tP(UGG)O1tP(UGG)O1 72 nt14.53□□□□□ -0.08
APS3P47064 SUF11tP(UGG)O2 72 nt14.53□□□□□ -0.08
APS3P47064 RPP1BYDL130W 321 nt14.5□□□□□ -0.09
APS3P47064 SSA3YBL075C 1950 nt14.47□□□□□ -0.09
APS3P47064 PKP1YIL042C 1185 nt14.46□□□□□ -0.09
APS3P47064 CCC1YLR220W 969 nt14.38□□□□□ -0.11
APS3P47064 YBR190WYBR190W 312 nt14.25□□□□□ -0.13
APS3P47064 RVS167YDR388W 1449 nt13.98□□□□□ -0.17
APS3P47064 RTC3YHR087W 336 nt13.94□□□□□ -0.18
APS3P47064 ATS1YAL020C 1002 nt13.86□□□□□ -0.19
APS3P47064 SCJ1YMR214W 1134 nt13.83□□□□□ -0.2
APS3P47064 PET122YER153C 765 nt13.79□□□□□ -0.2
APS3P47064 SCR1SCR1 522 nt13.77□□□□□ -0.21
APS3P47064 tP(UGG)O3tP(UGG)O3 72 nt13.76□□□□□ -0.21
APS3P47064 SHR5YOL110W 714 nt13.45□□□□□ -0.26
APS3P47064 RRN5YLR141W 1092 nt13.41□□□□□ -0.26
APS3P47064 YDJ1YNL064C 1230 nt13.35□□□□□ -0.27
APS3P47064 RSB1YOR049C 1065 nt13.18□□□□□ -0.3
APS3P47064 YER088W-BYER088W-B 147 nt13.15□□□□□ -0.3
APS3P47064 URN1YPR152C 1398 nt13.03□□□□□ -0.32
APS3P47064 GAR1YHR089C 618 nt13.01□□□□□ -0.33
APS3P47064 PUT4YOR348C 1884 nt13.01□□□□□ -0.33
APS3P47064 DEP1YAL013W 1218 nt12.98□□□□□ -0.33
APS3P47064 RPN10YHR200W 807 nt12.94□□□□□ -0.34
APS3P47064 YNL208WYNL208W 600 nt12.87□□□□□ -0.35
APS3P47064 OPI9YLR338W 858 nt12.84□□□□□ -0.35
APS3P47064 PST2YDR032C 597 nt12.82□□□□□ -0.36
APS3P47064 SAH1YER043C 1350 nt12.71□□□□□ -0.37
APS3P47064 ARE1YCR048W 1833 nt12.6□□□□□ -0.39
APS3P47064 TIR1YER011W 765 nt12.58□□□□□ -0.4
APS3P47064 POA1YBR022W 534 nt12.53□□□□□ -0.4
APS3P47064 PUN1YLR414C 792 nt12.52□□□□□ -0.41
APS3P47064 YHR049C-AYHR049C-A 297 nt12.48□□□□□ -0.41
APS3P47064 YJR018WYJR018W 363 nt12.45□□□□□ -0.42
APS3P47064 SSA4YER103W 1929 nt12.39□□□□□ -0.43
APS3P47064 YKL097CYKL097C 411 nt12.37□□□□□ -0.43
APS3P47064 BSC6YOL137W 1494 nt12.37□□□□□ -0.43
APS3P47064 SSA1YAL005C 1929 nt12.37□□□□□ -0.43
APS3P47064 SPT5YML010W 3192 nt12.36□□□□□ -0.43
APS3P47064 PAC11YDR488C 1602 nt12.35□□□□□ -0.43
APS3P47064 NVJ2YPR091C 2313 nt12.33□□□□□ -0.44
APS3P47064 PTC2YER089C 1395 nt12.3□□□□□ -0.44
APS3P47064 RPP2BYDR382W 333 nt12.28□□□□□ -0.44
APS3P47064 SHU1YHL006C 453 nt12.26□□□□□ -0.45
APS3P47064 BUD23YCR047C 828 nt12.21□□□□□ -0.45
APS3P47064 FPS1YLL043W 2010 nt12.18□□□□□ -0.46
APS3P47064 NAB2YGL122C 1578 nt12.18□□□□□ -0.46
APS3P47064 YJR120WYJR120W 351 nt12.13□□□□□ -0.47
APS3P47064 INM2YDR287W 879 nt12.06□□□□□ -0.48
APS3P47064 SRB2YHR041C 633 nt12.06□□□□□ -0.48
APS3P47064 YGR021WYGR021W 873 nt12.04□□□□□ -0.48
APS3P47064 YAL037C-BYAL037C-B 975 nt12.04□□□□□ -0.48
APS3P47064 DAL1YIR027C 1383 nt12.01□□□□□ -0.49
APS3P47064 WWM1YFL010C 636 nt11.99□□□□□ -0.49
APS3P47064 BDH2YAL061W 1254 nt11.98□□□□□ -0.49
APS3P47064 FPR4YLR449W 1179 nt11.98□□□□□ -0.49
APS3P47064 BDF1YLR399C 2061 nt11.96□□□□□ -0.49
APS3P47064 FIS1YIL065C 468 nt11.92□□□□□ -0.5
APS3P47064 HOM6YJR139C 1080 nt11.91□□□□□ -0.5
APS3P47064 YBL100CYBL100C 315 nt11.89□□□□□ -0.51
APS3P47064 YFL021C-AYFL021C-A 855 nt11.87□□□□□ -0.51
APS3P47064 PHO4YFR034C 939 nt11.86□□□□□ -0.51
APS3P47064 LSM3YLR438C-A 270 nt11.86□□□□□ -0.51
APS3P47064 MNP1YGL068W 585 nt11.8□□□□□ -0.52
APS3P47064 TAT1YBR069C 1860 nt11.78□□□□□ -0.52
APS3P47064 NPL3YDR432W 1245 nt11.78□□□□□ -0.52
APS3P47064 TRM9YML014W 840 nt11.78□□□□□ -0.52
APS3P47064 YOR139CYOR139C 393 nt11.77□□□□□ -0.53
APS3P47064 RKM5YLR137W 1104 nt11.75□□□□□ -0.53
APS3P47064 YOL037CYOL037C 354 nt11.74□□□□□ -0.53
APS3P47064 FUN26YAL022C 1554 nt11.74□□□□□ -0.53
APS3P47064 MEP2YNL142W 1500 nt11.69□□□□□ -0.54
APS3P47064 ALF1YNL148C 765 nt11.63□□□□□ -0.55
APS3P47064 CCT6YDR188W 1641 nt11.61□□□□□ -0.55
APS3P47064 YPS1YLR120C 1710 nt11.61□□□□□ -0.55
APS3P47064 SUF2tP(AGG)C 72 nt11.6□□□□□ -0.55
APS3P47064 SUF10tP(AGG)N 72 nt11.6□□□□□ -0.55
APS3P47064 YDR095CYDR095C 411 nt11.56□□□□□ -0.56
APS3P47064 YHR165W-AYHR165W-A 312 nt11.53□□□□□ -0.56
APS3P47064 DCW1YKL046C 1350 nt11.5□□□□□ -0.57
APS3P47064 YLR281CYLR281C 468 nt11.41□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms