Protein–RNA interactions for Protein: P38994

MSS4, Probable phosphatidylinositol 4-phosphate 5-kinase MSS4, yeastyeast

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSS4P38994 NSR1YGR159C 1245 nt17.76■□□□□ 0.43
MSS4P38994 YML009W-BYML009W-B 477 nt17.47■□□□□ 0.39
MSS4P38994 NOP1YDL014W 984 nt16.75■□□□□ 0.27
MSS4P38994 MDJ1YFL016C 1536 nt16.28■□□□□ 0.2
MSS4P38994 YKL036CYKL036C 393 nt15.64■□□□□ 0.09
MSS4P38994 YJL027CYJL027C 417 nt14.95□□□□□ -0.02
MSS4P38994 Q0297Q0297 156 nt14.64□□□□□ -0.07
MSS4P38994 SRX1YKL086W 384 nt14.64□□□□□ -0.07
MSS4P38994 SCS3YGL126W 1143 nt14.33□□□□□ -0.12
MSS4P38994 SSA3YBL075C 1950 nt14.23□□□□□ -0.13
MSS4P38994 DBP2YNL112W 1641 nt14.19□□□□□ -0.14
MSS4P38994 YBR190WYBR190W 312 nt13.97□□□□□ -0.17
MSS4P38994 YCR051WYCR051W 669 nt13.87□□□□□ -0.19
MSS4P38994 RTC3YHR087W 336 nt13.65□□□□□ -0.22
MSS4P38994 TRN1tP(UGG)A 72 nt13.55□□□□□ -0.24
MSS4P38994 SUF9tP(UGG)F 72 nt13.55□□□□□ -0.24
MSS4P38994 SUF8tP(UGG)H 72 nt13.55□□□□□ -0.24
MSS4P38994 tP(UGG)LtP(UGG)L 72 nt13.55□□□□□ -0.24
MSS4P38994 SUF7tP(UGG)M 72 nt13.55□□□□□ -0.24
MSS4P38994 tP(UGG)N1tP(UGG)N1 72 nt13.55□□□□□ -0.24
MSS4P38994 tP(UGG)N2tP(UGG)N2 72 nt13.55□□□□□ -0.24
MSS4P38994 tP(UGG)O1tP(UGG)O1 72 nt13.55□□□□□ -0.24
MSS4P38994 SUF11tP(UGG)O2 72 nt13.55□□□□□ -0.24
MSS4P38994 YOL085CYOL085C 342 nt13.47□□□□□ -0.25
MSS4P38994 CCC1YLR220W 969 nt13.42□□□□□ -0.26
MSS4P38994 SCJ1YMR214W 1134 nt13.36□□□□□ -0.27
MSS4P38994 RVS167YDR388W 1449 nt13.22□□□□□ -0.29
MSS4P38994 PKP1YIL042C 1185 nt13.14□□□□□ -0.31
MSS4P38994 RPP1BYDL130W 321 nt13.12□□□□□ -0.31
MSS4P38994 PUT4YOR348C 1884 nt13.08□□□□□ -0.32
MSS4P38994 ATS1YAL020C 1002 nt12.96□□□□□ -0.33
MSS4P38994 ARE1YCR048W 1833 nt12.69□□□□□ -0.38
MSS4P38994 tP(UGG)O3tP(UGG)O3 72 nt12.65□□□□□ -0.38
MSS4P38994 SHR5YOL110W 714 nt12.64□□□□□ -0.39
MSS4P38994 POA1YBR022W 534 nt12.63□□□□□ -0.39
MSS4P38994 URN1YPR152C 1398 nt12.6□□□□□ -0.39
MSS4P38994 SAH1YER043C 1350 nt12.57□□□□□ -0.4
MSS4P38994 YHR049C-AYHR049C-A 297 nt12.55□□□□□ -0.4
MSS4P38994 SCR1SCR1 522 nt12.53□□□□□ -0.4
MSS4P38994 PET122YER153C 765 nt12.52□□□□□ -0.41
MSS4P38994 OPI9YLR338W 858 nt12.5□□□□□ -0.41
MSS4P38994 DEP1YAL013W 1218 nt12.47□□□□□ -0.41
MSS4P38994 BSC6YOL137W 1494 nt12.46□□□□□ -0.42
MSS4P38994 RPN10YHR200W 807 nt12.28□□□□□ -0.44
MSS4P38994 YDJ1YNL064C 1230 nt12.23□□□□□ -0.45
MSS4P38994 SPT5YML010W 3192 nt12.22□□□□□ -0.45
MSS4P38994 BUD23YCR047C 828 nt12.21□□□□□ -0.45
MSS4P38994 YNL208WYNL208W 600 nt12.19□□□□□ -0.46
MSS4P38994 SSA4YER103W 1929 nt12.17□□□□□ -0.46
MSS4P38994 Q0182Q0182 405 nt12.15□□□□□ -0.46
MSS4P38994 PUN1YLR414C 792 nt12.14□□□□□ -0.47
MSS4P38994 RRN5YLR141W 1092 nt12.11□□□□□ -0.47
MSS4P38994 PTC2YER089C 1395 nt12.09□□□□□ -0.47
MSS4P38994 GAR1YHR089C 618 nt12.06□□□□□ -0.48
MSS4P38994 PAC11YDR488C 1602 nt12.05□□□□□ -0.48
MSS4P38994 RSB1YOR049C 1065 nt12□□□□□ -0.49
MSS4P38994 NAB2YGL122C 1578 nt11.98□□□□□ -0.49
MSS4P38994 YJR018WYJR018W 363 nt11.98□□□□□ -0.49
MSS4P38994 MOT3YMR070W 1473 nt11.95□□□□□ -0.5
MSS4P38994 PST2YDR032C 597 nt11.93□□□□□ -0.5
MSS4P38994 YER088W-BYER088W-B 147 nt11.87□□□□□ -0.51
MSS4P38994 NVJ2YPR091C 2313 nt11.84□□□□□ -0.51
MSS4P38994 BDF1YLR399C 2061 nt11.83□□□□□ -0.52
MSS4P38994 FIS1YIL065C 468 nt11.8□□□□□ -0.52
MSS4P38994 DAL1YIR027C 1383 nt11.74□□□□□ -0.53
MSS4P38994 MEP2YNL142W 1500 nt11.73□□□□□ -0.53
MSS4P38994 YJR120WYJR120W 351 nt11.72□□□□□ -0.53
MSS4P38994 FPR4YLR449W 1179 nt11.72□□□□□ -0.53
MSS4P38994 YKL097CYKL097C 411 nt11.71□□□□□ -0.53
MSS4P38994 TIR1YER011W 765 nt11.67□□□□□ -0.54
MSS4P38994 TAT1YBR069C 1860 nt11.66□□□□□ -0.54
MSS4P38994 PHO4YFR034C 939 nt11.64□□□□□ -0.55
MSS4P38994 SSA1YAL005C 1929 nt11.64□□□□□ -0.55
MSS4P38994 INM2YDR287W 879 nt11.6□□□□□ -0.55
MSS4P38994 RPP2BYDR382W 333 nt11.6□□□□□ -0.55
MSS4P38994 YPS1YLR120C 1710 nt11.58□□□□□ -0.56
MSS4P38994 DCW1YKL046C 1350 nt11.56□□□□□ -0.56
MSS4P38994 YHR165W-AYHR165W-A 312 nt11.49□□□□□ -0.57
MSS4P38994 FPS1YLL043W 2010 nt11.48□□□□□ -0.57
MSS4P38994 YBL100CYBL100C 315 nt11.44□□□□□ -0.58
MSS4P38994 YDR095CYDR095C 411 nt11.43□□□□□ -0.58
MSS4P38994 EMI2YDR516C 1503 nt11.38□□□□□ -0.59
MSS4P38994 SRB2YHR041C 633 nt11.37□□□□□ -0.59
MSS4P38994 YBR220CYBR220C 1683 nt11.33□□□□□ -0.6
MSS4P38994 YMR090WYMR090W 684 nt11.32□□□□□ -0.6
MSS4P38994 SHU1YHL006C 453 nt11.3□□□□□ -0.6
MSS4P38994 BDH2YAL061W 1254 nt11.29□□□□□ -0.6
MSS4P38994 FUN26YAL022C 1554 nt11.28□□□□□ -0.6
MSS4P38994 YDL221WYDL221W 552 nt11.25□□□□□ -0.61
MSS4P38994 CAC2YML102W 1407 nt11.24□□□□□ -0.61
MSS4P38994 PTP1YDL230W 1008 nt11.23□□□□□ -0.61
MSS4P38994 ALF1YNL148C 765 nt11.22□□□□□ -0.61
MSS4P38994 SDH1YKL148C 1923 nt11.21□□□□□ -0.61
MSS4P38994 RPP2AYOL039W 321 nt11.21□□□□□ -0.61
MSS4P38994 TRM9YML014W 840 nt11.15□□□□□ -0.62
MSS4P38994 WWM1YFL010C 636 nt11.08□□□□□ -0.64
MSS4P38994 CCT6YDR188W 1641 nt11.07□□□□□ -0.64
MSS4P38994 SCC4YER147C 1875 nt11.07□□□□□ -0.64
MSS4P38994 IRC15YPL017C 1500 nt11.07□□□□□ -0.64
MSS4P38994 SIS1YNL007C 1059 nt11.05□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms