RNA–Protein interactions for RNA: YGR161C-D

YGR161C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR161C-D, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR161C-DYGR161C-D MTC1P47018 478 aaKnown RBP4.39□□□□□ -1.71
YGR161C-DYGR161C-D SCT1P32784 759 aa4.02□□□□□ -1.77
YGR161C-DYGR161C-D RQC2Q12532 1038 aaKnown RBP3.99□□□□□ -1.77
YGR161C-DYGR161C-D RSE1Q04693 1361 aaKnown RBP3.93□□□□□ -1.78
YGR161C-DYGR161C-D NAP1P25293 417 aaKnown RBP3.87□□□□□ -1.79
YGR161C-DYGR161C-D NSR1P27476 414 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
YGR161C-DYGR161C-D INO80P53115 1489 aa3.85□□□□□ -1.79
YGR161C-DYGR161C-D YTA7P40340 1379 aa3.8□□□□□ -1.8
YGR161C-DYGR161C-D TAF7Q05021 590 aa3.78□□□□□ -1.8
YGR161C-DYGR161C-D URN1Q06525 465 aaKnown RBP3.78□□□□□ -1.8
YGR161C-DYGR161C-D BFR2Q06631 534 aaKnown RBP3.77□□□□□ -1.81
YGR161C-DYGR161C-D RTT106P40161 455 aa3.76□□□□□ -1.81
YGR161C-DYGR161C-D SPA2P23201 1466 aaKnown RBP3.76□□□□□ -1.81
YGR161C-DYGR161C-D ABP1P15891 592 aaKnown RBP3.75□□□□□ -1.81
YGR161C-DYGR161C-D TFA1P36100 482 aa3.74□□□□□ -1.81
YGR161C-DYGR161C-D MIF2P35201 549 aa3.74□□□□□ -1.81
YGR161C-DYGR161C-D SAS10Q12136 610 aaPredicted RBP3.74□□□□□ -1.81
YGR161C-DYGR161C-D DRS1P32892 752 aaKnown RBP3.72□□□□□ -1.81
YGR161C-DYGR161C-D PAF1P38351 445 aa3.72□□□□□ -1.81
YGR161C-DYGR161C-D LEU3P08638 886 aa3.71□□□□□ -1.82
YGR161C-DYGR161C-D ENP1P38333 483 aaKnown RBP3.66□□□□□ -1.82
YGR161C-DYGR161C-D YJL181WP46987 611 aa3.66□□□□□ -1.82
YGR161C-DYGR161C-D POL5P39985 1022 aaKnown RBP3.63□□□□□ -1.83
YGR161C-DYGR161C-D UBP1P25037 809 aa3.63□□□□□ -1.83
YGR161C-DYGR161C-D SIS2P36024 562 aa3.59□□□□□ -1.83
YGR161C-DYGR161C-D MRX12P47084 519 aa3.59□□□□□ -1.83
YGR161C-DYGR161C-D RRT14P40470 206 aa3.59□□□□□ -1.83
YGR161C-DYGR161C-D NOP7P53261 605 aaKnown RBP3.55□□□□□ -1.84
YGR161C-DYGR161C-D IFH1P39520 1085 aa3.55□□□□□ -1.84
YGR161C-DYGR161C-D PRI1P10363 409 aa3.54□□□□□ -1.84
YGR161C-DYGR161C-D NAB3P38996 802 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
YGR161C-DYGR161C-D CLB5P30283 435 aa3.5□□□□□ -1.85
YGR161C-DYGR161C-D PRP40P33203 583 aaKnown RBP3.49□□□□□ -1.85
YGR161C-DYGR161C-D SEN54Q02825 467 aaPredicted RBP3.47□□□□□ -1.85
YGR161C-DYGR161C-D BNR1P40450 1375 aa3.47□□□□□ -1.85
YGR161C-DYGR161C-D PSD2P53037 1138 aaKnown RBP3.46□□□□□ -1.86
YGR161C-DYGR161C-D LEO1P38439 464 aa3.45□□□□□ -1.86
YGR161C-DYGR161C-D TAF2P23255 1407 aa3.45□□□□□ -1.86
YGR161C-DYGR161C-D SUP35P05453 685 aaKnown RBP3.44□□□□□ -1.86
YGR161C-DYGR161C-D KOG1P38873 1557 aa3.44□□□□□ -1.86
YGR161C-DYGR161C-D SGS1P35187 1447 aa3.44□□□□□ -1.86
YGR161C-DYGR161C-D SPT5P27692 1063 aaKnown RBP3.44□□□□□ -1.86
YGR161C-DYGR161C-D YMR196WQ04336 1088 aa3.44□□□□□ -1.86
YGR161C-DYGR161C-D SKI3P17883 1432 aaKnown RBP3.44□□□□□ -1.86
YGR161C-DYGR161C-D STH1P32597 1359 aa3.44□□□□□ -1.86
YGR161C-DYGR161C-D YFR006WP43590 535 aa3.44□□□□□ -1.86
YGR161C-DYGR161C-D TCB3Q03640 1545 aaKnown RBP3.44□□□□□ -1.86
YGR161C-DYGR161C-D DRS2P39524 1355 aa3.43□□□□□ -1.86
YGR161C-DYGR161C-D TAF5P38129 798 aa3.43□□□□□ -1.86
YGR161C-DYGR161C-D ENP2P48234 707 aaKnown RBP3.43□□□□□ -1.86
YGR161C-DYGR161C-D LAM6Q08001 693 aa3.43□□□□□ -1.86
YGR161C-DYGR161C-D TIF4632P39936 914 aaKnown RBP3.43□□□□□ -1.86
YGR161C-DYGR161C-D CKB1P43639 278 aa3.43□□□□□ -1.86
YGR161C-DYGR161C-D YPR148CQ06523 435 aa3.42□□□□□ -1.86
YGR161C-DYGR161C-D BUD4P47136 1447 aa3.42□□□□□ -1.86
YGR161C-DYGR161C-D BUD21Q08492 214 aaPredicted RBP3.42□□□□□ -1.86
YGR161C-DYGR161C-D UGA2P38067 497 aa3.41□□□□□ -1.86
YGR161C-DYGR161C-D RTF1P53064 558 aa3.41□□□□□ -1.86
YGR161C-DYGR161C-D HUL5P53119 910 aa3.41□□□□□ -1.86
YGR161C-DYGR161C-D SWR1Q05471 1514 aa3.41□□□□□ -1.86
YGR161C-DYGR161C-D AVT3P36062 692 aa3.4□□□□□ -1.86
YGR161C-DYGR161C-D FPR3P38911 411 aaKnown RBP3.4□□□□□ -1.87
YGR161C-DYGR161C-D SAP155P43612 1002 aa3.39□□□□□ -1.87
YGR161C-DYGR161C-D NOP8Q08287 484 aaPredicted RBP3.39□□□□□ -1.87
YGR161C-DYGR161C-D CSE1P33307 960 aa3.38□□□□□ -1.87
YGR161C-DYGR161C-D SPT7P35177 1332 aa3.37□□□□□ -1.87
YGR161C-DYGR161C-D MEC3Q02574 474 aa3.37□□□□□ -1.87
YGR161C-DYGR161C-D TRM732Q03496 1420 aa3.37□□□□□ -1.87
YGR161C-DYGR161C-D SMC4Q12267 1418 aa3.37□□□□□ -1.87
YGR161C-DYGR161C-D SVF1Q05515 481 aa3.36□□□□□ -1.87
YGR161C-DYGR161C-D MET10P39692 1035 aa3.36□□□□□ -1.87
YGR161C-DYGR161C-D ALD3P54114 506 aa3.36□□□□□ -1.87
YGR161C-DYGR161C-D HPC2Q01448 625 aa3.36□□□□□ -1.87
YGR161C-DYGR161C-D FUN12P39730 1002 aaKnown RBP3.35□□□□□ -1.87
YGR161C-DYGR161C-D AIM7Q12156 149 aa3.35□□□□□ -1.87
YGR161C-DYGR161C-D FPR4Q06205 392 aaPredicted RBP3.35□□□□□ -1.87
YGR161C-DYGR161C-D RPS9BP05755 195 aaKnown RBP3.35□□□□□ -1.87
YGR161C-DYGR161C-D TPM1P17536 199 aaKnown RBP3.35□□□□□ -1.87
YGR161C-DYGR161C-D ALD2P47771 506 aa3.34□□□□□ -1.87
YGR161C-DYGR161C-D GEA2P39993 1459 aaKnown RBP3.33□□□□□ -1.88
YGR161C-DYGR161C-D RPP2BP02400 110 aaKnown RBP3.33□□□□□ -1.88
YGR161C-DYGR161C-D YAF9P53930 226 aa3.32□□□□□ -1.88
YGR161C-DYGR161C-D KEX1P09620 729 aa3.32□□□□□ -1.88
YGR161C-DYGR161C-D SPT6P23615 1451 aaKnown RBP3.31□□□□□ -1.88
YGR161C-DYGR161C-D SEC20P28791 383 aa3.31□□□□□ -1.88
YGR161C-DYGR161C-D IRC3Q06683 689 aa3.31□□□□□ -1.88
YGR161C-DYGR161C-D MMS1Q06211 1407 aa3.31□□□□□ -1.88
YGR161C-DYGR161C-D CHZ1P40019 153 aaPredicted RBP3.3□□□□□ -1.88
YGR161C-DYGR161C-D YFR016CP43597 1233 aaKnown RBP3.3□□□□□ -1.88
YGR161C-DYGR161C-D COG8Q04632 607 aa3.3□□□□□ -1.88
YGR161C-DYGR161C-D DAL5P15365 543 aa3.3□□□□□ -1.88
YGR161C-DYGR161C-D MDG1P53885 366 aa3.3□□□□□ -1.88
YGR161C-DYGR161C-D YEF3P16521 1044 aaKnown RBP3.29□□□□□ -1.88
YGR161C-DYGR161C-D PAP2P53632 584 aaKnown RBP3.29□□□□□ -1.88
YGR161C-DYGR161C-D ATG13Q06628 738 aa3.29□□□□□ -1.88
YGR161C-DYGR161C-D BRE1Q07457 700 aaKnown RBP3.29□□□□□ -1.88
YGR161C-DYGR161C-D RSC30P38781 883 aa3.29□□□□□ -1.88
YGR161C-DYGR161C-D ZDS2P54786 942 aa3.28□□□□□ -1.88
YGR161C-DYGR161C-D LTE1P07866 1435 aa3.28□□□□□ -1.88
YGR161C-DYGR161C-D ENV9Q08651 330 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms