Protein–RNA interactions for Protein: P53908

YNL143C, Uncharacterized membrane protein YNL143C, yeastyeast

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL143CP53908 YML009W-BYML009W-B 477 nt20.49■□□□□ 0.87
YNL143CP53908 NSR1YGR159C 1245 nt20.36■□□□□ 0.85
YNL143CP53908 NOP1YDL014W 984 nt20.01■□□□□ 0.79
YNL143CP53908 YKL036CYKL036C 393 nt18.53■□□□□ 0.56
YNL143CP53908 MDJ1YFL016C 1536 nt18.02■□□□□ 0.47
YNL143CP53908 Q0297Q0297 156 nt17.51■□□□□ 0.39
YNL143CP53908 SRX1YKL086W 384 nt17.45■□□□□ 0.38
YNL143CP53908 YJL027CYJL027C 417 nt17.32■□□□□ 0.36
YNL143CP53908 SCS3YGL126W 1143 nt16.88■□□□□ 0.29
YNL143CP53908 YCR051WYCR051W 669 nt16.56■□□□□ 0.24
YNL143CP53908 YOL085CYOL085C 342 nt16.02■□□□□ 0.16
YNL143CP53908 DBP2YNL112W 1641 nt15.97■□□□□ 0.15
YNL143CP53908 TRN1tP(UGG)A 72 nt15.75■□□□□ 0.11
YNL143CP53908 SUF9tP(UGG)F 72 nt15.75■□□□□ 0.11
YNL143CP53908 SUF8tP(UGG)H 72 nt15.75■□□□□ 0.11
YNL143CP53908 tP(UGG)LtP(UGG)L 72 nt15.75■□□□□ 0.11
YNL143CP53908 SUF7tP(UGG)M 72 nt15.75■□□□□ 0.11
YNL143CP53908 tP(UGG)N1tP(UGG)N1 72 nt15.75■□□□□ 0.11
YNL143CP53908 tP(UGG)N2tP(UGG)N2 72 nt15.75■□□□□ 0.11
YNL143CP53908 tP(UGG)O1tP(UGG)O1 72 nt15.75■□□□□ 0.11
YNL143CP53908 SUF11tP(UGG)O2 72 nt15.75■□□□□ 0.11
YNL143CP53908 PKP1YIL042C 1185 nt15.75■□□□□ 0.11
YNL143CP53908 RPP1BYDL130W 321 nt15.71■□□□□ 0.11
YNL143CP53908 CCC1YLR220W 969 nt15.55■□□□□ 0.08
YNL143CP53908 YBR190WYBR190W 312 nt15.38■□□□□ 0.05
YNL143CP53908 SCJ1YMR214W 1134 nt15.14■□□□□ 0.01
YNL143CP53908 ATS1YAL020C 1002 nt15.13■□□□□ 0.01
YNL143CP53908 RVS167YDR388W 1449 nt15.02■□□□□ -0
YNL143CP53908 RTC3YHR087W 336 nt15.01□□□□□ -0.01
YNL143CP53908 PET122YER153C 765 nt14.97□□□□□ -0.01
YNL143CP53908 tP(UGG)O3tP(UGG)O3 72 nt14.91□□□□□ -0.02
YNL143CP53908 SCR1SCR1 522 nt14.91□□□□□ -0.02
YNL143CP53908 RRN5YLR141W 1092 nt14.57□□□□□ -0.08
YNL143CP53908 SHR5YOL110W 714 nt14.53□□□□□ -0.08
YNL143CP53908 YDJ1YNL064C 1230 nt14.44□□□□□ -0.1
YNL143CP53908 RSB1YOR049C 1065 nt14.31□□□□□ -0.12
YNL143CP53908 YER088W-BYER088W-B 147 nt14.27□□□□□ -0.13
YNL143CP53908 GAR1YHR089C 618 nt14.08□□□□□ -0.16
YNL143CP53908 URN1YPR152C 1398 nt14.08□□□□□ -0.16
YNL143CP53908 DEP1YAL013W 1218 nt14.06□□□□□ -0.16
YNL143CP53908 PST2YDR032C 597 nt13.99□□□□□ -0.17
YNL143CP53908 PUT4YOR348C 1884 nt13.93□□□□□ -0.18
YNL143CP53908 RPN10YHR200W 807 nt13.89□□□□□ -0.19
YNL143CP53908 YNL208WYNL208W 600 nt13.89□□□□□ -0.19
YNL143CP53908 OPI9YLR338W 858 nt13.88□□□□□ -0.19
YNL143CP53908 SAH1YER043C 1350 nt13.76□□□□□ -0.21
YNL143CP53908 ARE1YCR048W 1833 nt13.68□□□□□ -0.22
YNL143CP53908 TIR1YER011W 765 nt13.61□□□□□ -0.23
YNL143CP53908 YKL097CYKL097C 411 nt13.53□□□□□ -0.24
YNL143CP53908 YHR049C-AYHR049C-A 297 nt13.51□□□□□ -0.25
YNL143CP53908 POA1YBR022W 534 nt13.49□□□□□ -0.25
YNL143CP53908 PUN1YLR414C 792 nt13.48□□□□□ -0.25
YNL143CP53908 SSA1YAL005C 1929 nt13.44□□□□□ -0.26
YNL143CP53908 YJR018WYJR018W 363 nt13.43□□□□□ -0.26
YNL143CP53908 SHU1YHL006C 453 nt13.38□□□□□ -0.27
YNL143CP53908 PTC2YER089C 1395 nt13.29□□□□□ -0.28
YNL143CP53908 YJR120WYJR120W 351 nt13.25□□□□□ -0.29
YNL143CP53908 SRB2YHR041C 633 nt13.22□□□□□ -0.29
YNL143CP53908 BSC6YOL137W 1494 nt13.19□□□□□ -0.3
YNL143CP53908 BUD23YCR047C 828 nt13.18□□□□□ -0.3
YNL143CP53908 RPP2BYDR382W 333 nt13.18□□□□□ -0.3
YNL143CP53908 YAL037C-BYAL037C-B 975 nt13.13□□□□□ -0.31
YNL143CP53908 NAB2YGL122C 1578 nt13.11□□□□□ -0.31
YNL143CP53908 WWM1YFL010C 636 nt13.01□□□□□ -0.33
YNL143CP53908 YGR021WYGR021W 873 nt13.01□□□□□ -0.33
YNL143CP53908 INM2YDR287W 879 nt12.97□□□□□ -0.33
YNL143CP53908 DAL1YIR027C 1383 nt12.96□□□□□ -0.33
YNL143CP53908 FIS1YIL065C 468 nt12.95□□□□□ -0.34
YNL143CP53908 HOM6YJR139C 1080 nt12.93□□□□□ -0.34
YNL143CP53908 BDH2YAL061W 1254 nt12.93□□□□□ -0.34
YNL143CP53908 FPR4YLR449W 1179 nt12.91□□□□□ -0.34
YNL143CP53908 YOR139CYOR139C 393 nt12.91□□□□□ -0.34
YNL143CP53908 SSA3YBL075C 1950 nt12.87□□□□□ -0.35
YNL143CP53908 NPL3YDR432W 1245 nt12.85□□□□□ -0.35
YNL143CP53908 MNP1YGL068W 585 nt12.85□□□□□ -0.35
YNL143CP53908 YBL100CYBL100C 315 nt12.84□□□□□ -0.35
YNL143CP53908 YFL021C-AYFL021C-A 855 nt12.83□□□□□ -0.36
YNL143CP53908 PHO4YFR034C 939 nt12.83□□□□□ -0.36
YNL143CP53908 LSM3YLR438C-A 270 nt12.78□□□□□ -0.36
YNL143CP53908 RKM5YLR137W 1104 nt12.74□□□□□ -0.37
YNL143CP53908 YOL037CYOL037C 354 nt12.74□□□□□ -0.37
YNL143CP53908 FUN26YAL022C 1554 nt12.69□□□□□ -0.38
YNL143CP53908 TRM9YML014W 840 nt12.66□□□□□ -0.38
YNL143CP53908 YPS1YLR120C 1710 nt12.57□□□□□ -0.4
YNL143CP53908 CCT6YDR188W 1641 nt12.55□□□□□ -0.4
YNL143CP53908 SPT5YML010W 3192 nt12.52□□□□□ -0.41
YNL143CP53908 YDR095CYDR095C 411 nt12.51□□□□□ -0.41
YNL143CP53908 ALF1YNL148C 765 nt12.49□□□□□ -0.41
YNL143CP53908 SUF2tP(AGG)C 72 nt12.44□□□□□ -0.42
YNL143CP53908 SUF10tP(AGG)N 72 nt12.44□□□□□ -0.42
YNL143CP53908 tM(CAU)CtM(CAU)C 72 nt12.42□□□□□ -0.42
YNL143CP53908 IMT4tM(CAU)E 72 nt12.42□□□□□ -0.42
YNL143CP53908 IMT3tM(CAU)J3 72 nt12.42□□□□□ -0.42
YNL143CP53908 IMT1tM(CAU)O1 72 nt12.42□□□□□ -0.42
YNL143CP53908 IMT2tM(CAU)P 72 nt12.42□□□□□ -0.42
YNL143CP53908 YHR165W-AYHR165W-A 312 nt12.42□□□□□ -0.42
YNL143CP53908 YLR281CYLR281C 468 nt12.4□□□□□ -0.42
YNL143CP53908 MEP2YNL142W 1500 nt12.38□□□□□ -0.43
YNL143CP53908 WHI5YOR083W 888 nt12.35□□□□□ -0.43
YNL143CP53908 PUS2YGL063W 1113 nt12.33□□□□□ -0.44
Retrieved 100 of 7,029 protein–RNA pairs in 108 ms