Protein–RNA interactions for Protein: Q04007

SND1, SRP-independent targeting protein 1, yeastyeast

Predictions only

Length 877 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SND1Q04007 YML009W-BYML009W-B 477 nt21.23■□□□□ 0.99
SND1Q04007 NSR1YGR159C 1245 nt21.1■□□□□ 0.97
SND1Q04007 NOP1YDL014W 984 nt20.68■□□□□ 0.9
SND1Q04007 YKL036CYKL036C 393 nt19.05■□□□□ 0.64
SND1Q04007 MDJ1YFL016C 1536 nt18.7■□□□□ 0.58
SND1Q04007 Q0297Q0297 156 nt18.06■□□□□ 0.48
SND1Q04007 SRX1YKL086W 384 nt18.03■□□□□ 0.48
SND1Q04007 YJL027CYJL027C 417 nt17.79■□□□□ 0.44
SND1Q04007 SCS3YGL126W 1143 nt17.3■□□□□ 0.36
SND1Q04007 YCR051WYCR051W 669 nt17.13■□□□□ 0.33
SND1Q04007 DBP2YNL112W 1641 nt16.51■□□□□ 0.23
SND1Q04007 YOL085CYOL085C 342 nt16.48■□□□□ 0.23
SND1Q04007 TRN1tP(UGG)A 72 nt16.28■□□□□ 0.2
SND1Q04007 SUF9tP(UGG)F 72 nt16.28■□□□□ 0.2
SND1Q04007 SUF8tP(UGG)H 72 nt16.28■□□□□ 0.2
SND1Q04007 tP(UGG)LtP(UGG)L 72 nt16.28■□□□□ 0.2
SND1Q04007 SUF7tP(UGG)M 72 nt16.28■□□□□ 0.2
SND1Q04007 tP(UGG)N1tP(UGG)N1 72 nt16.28■□□□□ 0.2
SND1Q04007 tP(UGG)N2tP(UGG)N2 72 nt16.28■□□□□ 0.2
SND1Q04007 tP(UGG)O1tP(UGG)O1 72 nt16.28■□□□□ 0.2
SND1Q04007 SUF11tP(UGG)O2 72 nt16.28■□□□□ 0.2
SND1Q04007 PKP1YIL042C 1185 nt16.23■□□□□ 0.19
SND1Q04007 RPP1BYDL130W 321 nt16.22■□□□□ 0.19
SND1Q04007 CCC1YLR220W 969 nt16.15■□□□□ 0.18
SND1Q04007 YBR190WYBR190W 312 nt15.98■□□□□ 0.15
SND1Q04007 RTC3YHR087W 336 nt15.65■□□□□ 0.1
SND1Q04007 RVS167YDR388W 1449 nt15.62■□□□□ 0.09
SND1Q04007 ATS1YAL020C 1002 nt15.48■□□□□ 0.07
SND1Q04007 PET122YER153C 765 nt15.47■□□□□ 0.07
SND1Q04007 SCJ1YMR214W 1134 nt15.45■□□□□ 0.06
SND1Q04007 tP(UGG)O3tP(UGG)O3 72 nt15.41■□□□□ 0.06
SND1Q04007 SCR1SCR1 522 nt15.36■□□□□ 0.05
SND1Q04007 SHR5YOL110W 714 nt15.04■□□□□ -0
SND1Q04007 RRN5YLR141W 1092 nt15.03■□□□□ -0
SND1Q04007 YDJ1YNL064C 1230 nt14.93□□□□□ -0.02
SND1Q04007 RSB1YOR049C 1065 nt14.74□□□□□ -0.05
SND1Q04007 YER088W-BYER088W-B 147 nt14.73□□□□□ -0.05
SND1Q04007 URN1YPR152C 1398 nt14.62□□□□□ -0.07
SND1Q04007 DEP1YAL013W 1218 nt14.61□□□□□ -0.07
SND1Q04007 GAR1YHR089C 618 nt14.58□□□□□ -0.08
SND1Q04007 PUT4YOR348C 1884 nt14.57□□□□□ -0.08
SND1Q04007 RPN10YHR200W 807 nt14.45□□□□□ -0.1
SND1Q04007 OPI9YLR338W 858 nt14.41□□□□□ -0.1
SND1Q04007 YNL208WYNL208W 600 nt14.4□□□□□ -0.1
SND1Q04007 Q0182Q0182 405 nt14.39□□□□□ -0.11
SND1Q04007 SSA3YBL075C 1950 nt14.39□□□□□ -0.11
SND1Q04007 PST2YDR032C 597 nt14.33□□□□□ -0.12
SND1Q04007 SAH1YER043C 1350 nt14.3□□□□□ -0.12
SND1Q04007 ARE1YCR048W 1833 nt14.22□□□□□ -0.13
SND1Q04007 TIR1YER011W 765 nt14.1□□□□□ -0.15
SND1Q04007 POA1YBR022W 534 nt14.06□□□□□ -0.16
SND1Q04007 YHR049C-AYHR049C-A 297 nt14.05□□□□□ -0.16
SND1Q04007 PUN1YLR414C 792 nt14.01□□□□□ -0.17
SND1Q04007 YJR018WYJR018W 363 nt13.96□□□□□ -0.17
SND1Q04007 SSA1YAL005C 1929 nt13.9□□□□□ -0.18
SND1Q04007 PTC2YER089C 1395 nt13.82□□□□□ -0.2
SND1Q04007 MOT3YMR070W 1473 nt13.81□□□□□ -0.2
SND1Q04007 YKL097CYKL097C 411 nt13.79□□□□□ -0.2
SND1Q04007 BSC6YOL137W 1494 nt13.79□□□□□ -0.2
SND1Q04007 BUD23YCR047C 828 nt13.75□□□□□ -0.21
SND1Q04007 SHU1YHL006C 453 nt13.74□□□□□ -0.21
SND1Q04007 RPP2BYDR382W 333 nt13.71□□□□□ -0.21
SND1Q04007 YJR120WYJR120W 351 nt13.67□□□□□ -0.22
SND1Q04007 NAB2YGL122C 1578 nt13.65□□□□□ -0.22
SND1Q04007 SRB2YHR041C 633 nt13.61□□□□□ -0.23
SND1Q04007 SPT5YML010W 3192 nt13.61□□□□□ -0.23
SND1Q04007 YAL037C-BYAL037C-B 975 nt13.54□□□□□ -0.24
SND1Q04007 INM2YDR287W 879 nt13.48□□□□□ -0.25
SND1Q04007 WWM1YFL010C 636 nt13.47□□□□□ -0.25
SND1Q04007 DAL1YIR027C 1383 nt13.46□□□□□ -0.25
SND1Q04007 FPR4YLR449W 1179 nt13.46□□□□□ -0.25
SND1Q04007 YGR021WYGR021W 873 nt13.42□□□□□ -0.26
SND1Q04007 FIS1YIL065C 468 nt13.4□□□□□ -0.26
SND1Q04007 BDH2YAL061W 1254 nt13.4□□□□□ -0.26
SND1Q04007 HOM6YJR139C 1080 nt13.33□□□□□ -0.28
SND1Q04007 YBL100CYBL100C 315 nt13.33□□□□□ -0.28
SND1Q04007 PHO4YFR034C 939 nt13.32□□□□□ -0.28
SND1Q04007 YFL021C-AYFL021C-A 855 nt13.27□□□□□ -0.29
SND1Q04007 MNP1YGL068W 585 nt13.26□□□□□ -0.29
SND1Q04007 LSM3YLR438C-A 270 nt13.24□□□□□ -0.29
SND1Q04007 YOR139CYOR139C 393 nt13.19□□□□□ -0.3
SND1Q04007 TRM9YML014W 840 nt13.18□□□□□ -0.3
SND1Q04007 FUN26YAL022C 1554 nt13.17□□□□□ -0.3
SND1Q04007 NPL3YDR432W 1245 nt13.15□□□□□ -0.3
SND1Q04007 RKM5YLR137W 1104 nt13.15□□□□□ -0.3
SND1Q04007 SSA4YER103W 1929 nt13.11□□□□□ -0.31
SND1Q04007 YOL037CYOL037C 354 nt13.08□□□□□ -0.32
SND1Q04007 YPS1YLR120C 1710 nt13.05□□□□□ -0.32
SND1Q04007 ALF1YNL148C 765 nt13.02□□□□□ -0.33
SND1Q04007 CCT6YDR188W 1641 nt13.01□□□□□ -0.33
SND1Q04007 MEP2YNL142W 1500 nt12.99□□□□□ -0.33
SND1Q04007 YDR095CYDR095C 411 nt12.97□□□□□ -0.33
SND1Q04007 SUF2tP(AGG)C 72 nt12.94□□□□□ -0.34
SND1Q04007 SUF10tP(AGG)N 72 nt12.94□□□□□ -0.34
SND1Q04007 YHR165W-AYHR165W-A 312 nt12.94□□□□□ -0.34
SND1Q04007 DCW1YKL046C 1350 nt12.82□□□□□ -0.36
SND1Q04007 SIS1YNL007C 1059 nt12.77□□□□□ -0.37
SND1Q04007 RPP2AYOL039W 321 nt12.76□□□□□ -0.37
SND1Q04007 YLR281CYLR281C 468 nt12.75□□□□□ -0.37
SND1Q04007 WHI5YOR083W 888 nt12.72□□□□□ -0.37
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms