Protein–RNA interactions for Protein: P38804

RTC3, Restriction of telomere capping protein 3, yeastyeast

Predicted RBP Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTC3P38804 NSR1YGR159C 1245 nt16.64■□□□□ 0.25
RTC3P38804 YML009W-BYML009W-B 477 nt16.4■□□□□ 0.22
RTC3P38804 NOP1YDL014W 984 nt15.96■□□□□ 0.15
RTC3P38804 MDJ1YFL016C 1536 nt14.92□□□□□ -0.02
RTC3P38804 YKL036CYKL036C 393 nt14.33□□□□□ -0.12
RTC3P38804 YJL027CYJL027C 417 nt13.9□□□□□ -0.18
RTC3P38804 SRX1YKL086W 384 nt13.84□□□□□ -0.19
RTC3P38804 Q0297Q0297 156 nt13.75□□□□□ -0.21
RTC3P38804 SSA3YBL075C 1950 nt13.7□□□□□ -0.22
RTC3P38804 YCR051WYCR051W 669 nt13.09□□□□□ -0.31
RTC3P38804 DBP2YNL112W 1641 nt13.01□□□□□ -0.33
RTC3P38804 YBR190WYBR190W 312 nt12.95□□□□□ -0.34
RTC3P38804 SCS3YGL126W 1143 nt12.77□□□□□ -0.37
RTC3P38804 TRN1tP(UGG)A 72 nt12.66□□□□□ -0.38
RTC3P38804 SUF9tP(UGG)F 72 nt12.66□□□□□ -0.38
RTC3P38804 SUF8tP(UGG)H 72 nt12.66□□□□□ -0.38
RTC3P38804 tP(UGG)LtP(UGG)L 72 nt12.66□□□□□ -0.38
RTC3P38804 SUF7tP(UGG)M 72 nt12.66□□□□□ -0.38
RTC3P38804 tP(UGG)N1tP(UGG)N1 72 nt12.66□□□□□ -0.38
RTC3P38804 tP(UGG)N2tP(UGG)N2 72 nt12.66□□□□□ -0.38
RTC3P38804 tP(UGG)O1tP(UGG)O1 72 nt12.66□□□□□ -0.38
RTC3P38804 SUF11tP(UGG)O2 72 nt12.66□□□□□ -0.38
RTC3P38804 RTC3YHR087W 336 nt12.64□□□□□ -0.39
RTC3P38804 CCC1YLR220W 969 nt12.5□□□□□ -0.41
RTC3P38804 RVS167YDR388W 1449 nt12.45□□□□□ -0.42
RTC3P38804 RPP1BYDL130W 321 nt12.34□□□□□ -0.43
RTC3P38804 YOL085CYOL085C 342 nt12.33□□□□□ -0.44
RTC3P38804 PKP1YIL042C 1185 nt12.12□□□□□ -0.47
RTC3P38804 SCJ1YMR214W 1134 nt12.05□□□□□ -0.48
RTC3P38804 PUT4YOR348C 1884 nt11.99□□□□□ -0.49
RTC3P38804 SSA1YAL005C 1929 nt11.91□□□□□ -0.5
RTC3P38804 FPS1YLL043W 2010 nt11.91□□□□□ -0.5
RTC3P38804 NVJ2YPR091C 2313 nt11.87□□□□□ -0.51
RTC3P38804 tP(UGG)O3tP(UGG)O3 72 nt11.86□□□□□ -0.51
RTC3P38804 PAC11YDR488C 1602 nt11.86□□□□□ -0.51
RTC3P38804 SHR5YOL110W 714 nt11.85□□□□□ -0.51
RTC3P38804 PET122YER153C 765 nt11.75□□□□□ -0.53
RTC3P38804 SCR1SCR1 522 nt11.72□□□□□ -0.53
RTC3P38804 URN1YPR152C 1398 nt11.67□□□□□ -0.54
RTC3P38804 RPN10YHR200W 807 nt11.61□□□□□ -0.55
RTC3P38804 ARE1YCR048W 1833 nt11.58□□□□□ -0.56
RTC3P38804 OPI9YLR338W 858 nt11.58□□□□□ -0.56
RTC3P38804 YDJ1YNL064C 1230 nt11.55□□□□□ -0.56
RTC3P38804 SPT5YML010W 3192 nt11.54□□□□□ -0.56
RTC3P38804 SAH1YER043C 1350 nt11.52□□□□□ -0.57
RTC3P38804 DEP1YAL013W 1218 nt11.49□□□□□ -0.57
RTC3P38804 POA1YBR022W 534 nt11.49□□□□□ -0.57
RTC3P38804 YHR049C-AYHR049C-A 297 nt11.47□□□□□ -0.57
RTC3P38804 YNL208WYNL208W 600 nt11.42□□□□□ -0.58
RTC3P38804 RRN5YLR141W 1092 nt11.38□□□□□ -0.59
RTC3P38804 BSC6YOL137W 1494 nt11.38□□□□□ -0.59
RTC3P38804 ATS1YAL020C 1002 nt11.34□□□□□ -0.59
RTC3P38804 PUN1YLR414C 792 nt11.33□□□□□ -0.6
RTC3P38804 SSA4YER103W 1929 nt11.27□□□□□ -0.61
RTC3P38804 GAR1YHR089C 618 nt11.26□□□□□ -0.61
RTC3P38804 BUD23YCR047C 828 nt11.21□□□□□ -0.61
RTC3P38804 YER088W-BYER088W-B 147 nt11.14□□□□□ -0.63
RTC3P38804 YJR018WYJR018W 363 nt11.14□□□□□ -0.63
RTC3P38804 PTC2YER089C 1395 nt11.13□□□□□ -0.63
RTC3P38804 RSB1YOR049C 1065 nt11.12□□□□□ -0.63
RTC3P38804 NAB2YGL122C 1578 nt11.1□□□□□ -0.63
RTC3P38804 BDF1YLR399C 2061 nt11.02□□□□□ -0.65
RTC3P38804 RPP2BYDR382W 333 nt10.95□□□□□ -0.66
RTC3P38804 TIR1YER011W 765 nt10.93□□□□□ -0.66
RTC3P38804 DAL1YIR027C 1383 nt10.88□□□□□ -0.67
RTC3P38804 UME6YDR207C 2511 nt10.87□□□□□ -0.67
RTC3P38804 INM2YDR287W 879 nt10.86□□□□□ -0.67
RTC3P38804 TAT1YBR069C 1860 nt10.83□□□□□ -0.68
RTC3P38804 FPR4YLR449W 1179 nt10.83□□□□□ -0.68
RTC3P38804 FIS1YIL065C 468 nt10.81□□□□□ -0.68
RTC3P38804 Q0182Q0182 405 nt10.79□□□□□ -0.68
RTC3P38804 YJL225CYJL225C 5277 nt10.78□□□□□ -0.68
RTC3P38804 MEP2YNL142W 1500 nt10.76□□□□□ -0.69
RTC3P38804 PHO4YFR034C 939 nt10.74□□□□□ -0.69
RTC3P38804 YJR120WYJR120W 351 nt10.71□□□□□ -0.69
RTC3P38804 YBL100CYBL100C 315 nt10.65□□□□□ -0.7
RTC3P38804 YPS1YLR120C 1710 nt10.62□□□□□ -0.71
RTC3P38804 YHR165W-AYHR165W-A 312 nt10.6□□□□□ -0.71
RTC3P38804 DCW1YKL046C 1350 nt10.59□□□□□ -0.71
RTC3P38804 RDN37-1RDN37-1 5354 nt10.57□□□□□ -0.72
RTC3P38804 RDN37-2RDN37-2 5354 nt10.57□□□□□ -0.72
RTC3P38804 BDH2YAL061W 1254 nt10.57□□□□□ -0.72
RTC3P38804 RPM1RPM1 483 nt10.55□□□□□ -0.72
RTC3P38804 YDR095CYDR095C 411 nt10.53□□□□□ -0.72
RTC3P38804 PST2YDR032C 597 nt10.52□□□□□ -0.73
RTC3P38804 ALF1YNL148C 765 nt10.51□□□□□ -0.73
RTC3P38804 YMR090WYMR090W 684 nt10.5□□□□□ -0.73
RTC3P38804 YBR220CYBR220C 1683 nt10.48□□□□□ -0.73
RTC3P38804 FUN26YAL022C 1554 nt10.47□□□□□ -0.73
RTC3P38804 TRM9YML014W 840 nt10.46□□□□□ -0.73
RTC3P38804 LSM3YLR438C-A 270 nt10.42□□□□□ -0.74
RTC3P38804 EMI2YDR516C 1503 nt10.4□□□□□ -0.74
RTC3P38804 SUF2tP(AGG)C 72 nt10.4□□□□□ -0.74
RTC3P38804 SUF10tP(AGG)N 72 nt10.4□□□□□ -0.74
RTC3P38804 RPP2AYOL039W 321 nt10.36□□□□□ -0.75
RTC3P38804 YGR021WYGR021W 873 nt10.35□□□□□ -0.75
RTC3P38804 SRB2YHR041C 633 nt10.35□□□□□ -0.75
RTC3P38804 CCT6YDR188W 1641 nt10.33□□□□□ -0.76
RTC3P38804 WWM1YFL010C 636 nt10.32□□□□□ -0.76
RTC3P38804 YFL021C-AYFL021C-A 855 nt10.29□□□□□ -0.76
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms