Protein–RNA interactions for Protein: Q06328

YPQ2, Probable vacuolar amino acid transporter YPQ2, yeastyeast

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPQ2Q06328 NSR1YGR159C 1245 nt18.47■□□□□ 0.55
YPQ2Q06328 YML009W-BYML009W-B 477 nt18.3■□□□□ 0.52
YPQ2Q06328 NOP1YDL014W 984 nt17.71■□□□□ 0.43
YPQ2Q06328 MDJ1YFL016C 1536 nt16.65■□□□□ 0.26
YPQ2Q06328 YKL036CYKL036C 393 nt16■□□□□ 0.15
YPQ2Q06328 SRX1YKL086W 384 nt15.42■□□□□ 0.06
YPQ2Q06328 YJL027CYJL027C 417 nt15.41■□□□□ 0.06
YPQ2Q06328 Q0297Q0297 156 nt15.33■□□□□ 0.04
YPQ2Q06328 SSA3YBL075C 1950 nt15.08■□□□□ 0
YPQ2Q06328 YCR051WYCR051W 669 nt14.62□□□□□ -0.07
YPQ2Q06328 DBP2YNL112W 1641 nt14.55□□□□□ -0.08
YPQ2Q06328 SCS3YGL126W 1143 nt14.34□□□□□ -0.11
YPQ2Q06328 YBR190WYBR190W 312 nt14.33□□□□□ -0.12
YPQ2Q06328 Q0182Q0182 405 nt14.22□□□□□ -0.13
YPQ2Q06328 MOT3YMR070W 1473 nt14.13□□□□□ -0.15
YPQ2Q06328 TRN1tP(UGG)A 72 nt14.11□□□□□ -0.15
YPQ2Q06328 SUF9tP(UGG)F 72 nt14.11□□□□□ -0.15
YPQ2Q06328 SUF8tP(UGG)H 72 nt14.11□□□□□ -0.15
YPQ2Q06328 tP(UGG)LtP(UGG)L 72 nt14.11□□□□□ -0.15
YPQ2Q06328 SUF7tP(UGG)M 72 nt14.11□□□□□ -0.15
YPQ2Q06328 tP(UGG)N1tP(UGG)N1 72 nt14.11□□□□□ -0.15
YPQ2Q06328 tP(UGG)N2tP(UGG)N2 72 nt14.11□□□□□ -0.15
YPQ2Q06328 tP(UGG)O1tP(UGG)O1 72 nt14.11□□□□□ -0.15
YPQ2Q06328 SUF11tP(UGG)O2 72 nt14.11□□□□□ -0.15
YPQ2Q06328 RTC3YHR087W 336 nt14.02□□□□□ -0.17
YPQ2Q06328 CCC1YLR220W 969 nt13.98□□□□□ -0.17
YPQ2Q06328 YOL085CYOL085C 342 nt13.82□□□□□ -0.2
YPQ2Q06328 RVS167YDR388W 1449 nt13.76□□□□□ -0.21
YPQ2Q06328 RPP1BYDL130W 321 nt13.76□□□□□ -0.21
YPQ2Q06328 PKP1YIL042C 1185 nt13.64□□□□□ -0.23
YPQ2Q06328 SCJ1YMR214W 1134 nt13.5□□□□□ -0.25
YPQ2Q06328 PUT4YOR348C 1884 nt13.4□□□□□ -0.26
YPQ2Q06328 tP(UGG)O3tP(UGG)O3 72 nt13.25□□□□□ -0.29
YPQ2Q06328 PET122YER153C 765 nt13.16□□□□□ -0.3
YPQ2Q06328 SHR5YOL110W 714 nt13.16□□□□□ -0.3
YPQ2Q06328 SPT5YML010W 3192 nt13.14□□□□□ -0.31
YPQ2Q06328 SSA4YER103W 1929 nt13.05□□□□□ -0.32
YPQ2Q06328 YGR139WYGR139W 339 nt13.02□□□□□ -0.33
YPQ2Q06328 SCR1SCR1 522 nt13.02□□□□□ -0.33
YPQ2Q06328 URN1YPR152C 1398 nt12.98□□□□□ -0.33
YPQ2Q06328 ARE1YCR048W 1833 nt12.86□□□□□ -0.35
YPQ2Q06328 DEP1YAL013W 1218 nt12.85□□□□□ -0.35
YPQ2Q06328 OPI9YLR338W 858 nt12.85□□□□□ -0.35
YPQ2Q06328 YDJ1YNL064C 1230 nt12.84□□□□□ -0.35
YPQ2Q06328 SAH1YER043C 1350 nt12.83□□□□□ -0.36
YPQ2Q06328 POA1YBR022W 534 nt12.82□□□□□ -0.36
YPQ2Q06328 RPN10YHR200W 807 nt12.79□□□□□ -0.36
YPQ2Q06328 BSC6YOL137W 1494 nt12.77□□□□□ -0.37
YPQ2Q06328 RRN5YLR141W 1092 nt12.75□□□□□ -0.37
YPQ2Q06328 NME1NME1 340 nt12.75□□□□□ -0.37
YPQ2Q06328 BDF1YLR399C 2061 nt12.74□□□□□ -0.37
YPQ2Q06328 ATS1YAL020C 1002 nt12.74□□□□□ -0.37
YPQ2Q06328 YHR049C-AYHR049C-A 297 nt12.73□□□□□ -0.37
YPQ2Q06328 YNL208WYNL208W 600 nt12.66□□□□□ -0.38
YPQ2Q06328 GAR1YHR089C 618 nt12.59□□□□□ -0.39
YPQ2Q06328 PAC11YDR488C 1602 nt12.59□□□□□ -0.39
YPQ2Q06328 TAT1YBR069C 1860 nt12.53□□□□□ -0.4
YPQ2Q06328 PUN1YLR414C 792 nt12.51□□□□□ -0.41
YPQ2Q06328 YER088W-BYER088W-B 147 nt12.49□□□□□ -0.41
YPQ2Q06328 BUD23YCR047C 828 nt12.44□□□□□ -0.42
YPQ2Q06328 RSB1YOR049C 1065 nt12.43□□□□□ -0.42
YPQ2Q06328 NVJ2YPR091C 2313 nt12.43□□□□□ -0.42
YPQ2Q06328 YJR018WYJR018W 363 nt12.37□□□□□ -0.43
YPQ2Q06328 PTC2YER089C 1395 nt12.37□□□□□ -0.43
YPQ2Q06328 NAB2YGL122C 1578 nt12.28□□□□□ -0.44
YPQ2Q06328 TIR1YER011W 765 nt12.19□□□□□ -0.46
YPQ2Q06328 RPP2BYDR382W 333 nt12.09□□□□□ -0.47
YPQ2Q06328 MEP2YNL142W 1500 nt12.08□□□□□ -0.48
YPQ2Q06328 SSA1YAL005C 1929 nt12.06□□□□□ -0.48
YPQ2Q06328 DAL1YIR027C 1383 nt12.05□□□□□ -0.48
YPQ2Q06328 FPR4YLR449W 1179 nt12.04□□□□□ -0.48
YPQ2Q06328 FIS1YIL065C 468 nt12.02□□□□□ -0.49
YPQ2Q06328 YJR120WYJR120W 351 nt12.01□□□□□ -0.49
YPQ2Q06328 INM2YDR287W 879 nt12□□□□□ -0.49
YPQ2Q06328 DCW1YKL046C 1350 nt11.94□□□□□ -0.5
YPQ2Q06328 CSM2YIL132C 642 nt11.94□□□□□ -0.5
YPQ2Q06328 FPS1YLL043W 2010 nt11.93□□□□□ -0.5
YPQ2Q06328 PHO4YFR034C 939 nt11.93□□□□□ -0.5
YPQ2Q06328 YBR220CYBR220C 1683 nt11.87□□□□□ -0.51
YPQ2Q06328 PST2YDR032C 597 nt11.84□□□□□ -0.51
YPQ2Q06328 YBL100CYBL100C 315 nt11.81□□□□□ -0.52
YPQ2Q06328 YPS1YLR120C 1710 nt11.79□□□□□ -0.52
YPQ2Q06328 YHR165W-AYHR165W-A 312 nt11.74□□□□□ -0.53
YPQ2Q06328 BDH2YAL061W 1254 nt11.74□□□□□ -0.53
YPQ2Q06328 SRB2YHR041C 633 nt11.73□□□□□ -0.53
YPQ2Q06328 YDR095CYDR095C 411 nt11.68□□□□□ -0.54
YPQ2Q06328 GUT2YIL155C 1950 nt11.68□□□□□ -0.54
YPQ2Q06328 EMI2YDR516C 1503 nt11.66□□□□□ -0.54
YPQ2Q06328 PCH2YBR186W 1695 nt11.66□□□□□ -0.54
YPQ2Q06328 FUN26YAL022C 1554 nt11.64□□□□□ -0.55
YPQ2Q06328 PAU21YOR394W 495 nt11.63□□□□□ -0.55
YPQ2Q06328 PAU22YPL282C 495 nt11.63□□□□□ -0.55
YPQ2Q06328 ALF1YNL148C 765 nt11.61□□□□□ -0.55
YPQ2Q06328 TRM9YML014W 840 nt11.6□□□□□ -0.55
YPQ2Q06328 PIB2YGL023C 1908 nt11.6□□□□□ -0.55
YPQ2Q06328 UME6YDR207C 2511 nt11.59□□□□□ -0.55
YPQ2Q06328 SDH1YKL148C 1923 nt11.57□□□□□ -0.56
YPQ2Q06328 WWM1YFL010C 636 nt11.57□□□□□ -0.56
YPQ2Q06328 LSM3YLR438C-A 270 nt11.54□□□□□ -0.56
YPQ2Q06328 YMR090WYMR090W 684 nt11.52□□□□□ -0.57
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms