Protein–RNA interactions for Protein: P53078

SDT1, Suppressor of disruption of TFIIS, yeastyeast

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDT1P53078 YML009W-BYML009W-B 477 nt19.55■□□□□ 0.72
SDT1P53078 NSR1YGR159C 1245 nt19.5■□□□□ 0.71
SDT1P53078 NOP1YDL014W 984 nt19.06■□□□□ 0.64
SDT1P53078 YKL036CYKL036C 393 nt17.51■□□□□ 0.39
SDT1P53078 MDJ1YFL016C 1536 nt17.27■□□□□ 0.36
SDT1P53078 Q0297Q0297 156 nt16.63■□□□□ 0.25
SDT1P53078 SRX1YKL086W 384 nt16.61■□□□□ 0.25
SDT1P53078 YJL027CYJL027C 417 nt16.33■□□□□ 0.2
SDT1P53078 SCS3YGL126W 1143 nt15.87■□□□□ 0.13
SDT1P53078 YCR051WYCR051W 669 nt15.74■□□□□ 0.11
SDT1P53078 DBP2YNL112W 1641 nt15.25■□□□□ 0.03
SDT1P53078 YOL085CYOL085C 342 nt15.13■□□□□ 0.01
SDT1P53078 TRN1tP(UGG)A 72 nt15.03■□□□□ -0
SDT1P53078 SUF9tP(UGG)F 72 nt15.03■□□□□ -0
SDT1P53078 SUF8tP(UGG)H 72 nt15.03■□□□□ -0
SDT1P53078 tP(UGG)LtP(UGG)L 72 nt15.03■□□□□ -0
SDT1P53078 SUF7tP(UGG)M 72 nt15.03■□□□□ -0
SDT1P53078 tP(UGG)N1tP(UGG)N1 72 nt15.03■□□□□ -0
SDT1P53078 tP(UGG)N2tP(UGG)N2 72 nt15.03■□□□□ -0
SDT1P53078 tP(UGG)O1tP(UGG)O1 72 nt15.03■□□□□ -0
SDT1P53078 SUF11tP(UGG)O2 72 nt15.03■□□□□ -0
SDT1P53078 RPP1BYDL130W 321 nt14.92□□□□□ -0.02
SDT1P53078 PKP1YIL042C 1185 nt14.86□□□□□ -0.03
SDT1P53078 CCC1YLR220W 969 nt14.84□□□□□ -0.03
SDT1P53078 YBR190WYBR190W 312 nt14.8□□□□□ -0.04
SDT1P53078 RTC3YHR087W 336 nt14.46□□□□□ -0.09
SDT1P53078 RVS167YDR388W 1449 nt14.46□□□□□ -0.09
SDT1P53078 SCJ1YMR214W 1134 nt14.27□□□□□ -0.13
SDT1P53078 PET122YER153C 765 nt14.22□□□□□ -0.13
SDT1P53078 tP(UGG)O3tP(UGG)O3 72 nt14.2□□□□□ -0.14
SDT1P53078 ATS1YAL020C 1002 nt14.19□□□□□ -0.14
SDT1P53078 SCR1SCR1 522 nt14.14□□□□□ -0.15
SDT1P53078 SHR5YOL110W 714 nt13.91□□□□□ -0.18
SDT1P53078 RRN5YLR141W 1092 nt13.8□□□□□ -0.2
SDT1P53078 YDJ1YNL064C 1230 nt13.77□□□□□ -0.21
SDT1P53078 RSB1YOR049C 1065 nt13.54□□□□□ -0.24
SDT1P53078 YER088W-BYER088W-B 147 nt13.53□□□□□ -0.24
SDT1P53078 URN1YPR152C 1398 nt13.51□□□□□ -0.25
SDT1P53078 DEP1YAL013W 1218 nt13.45□□□□□ -0.26
SDT1P53078 SSA3YBL075C 1950 nt13.44□□□□□ -0.26
SDT1P53078 GAR1YHR089C 618 nt13.43□□□□□ -0.26
SDT1P53078 PUT4YOR348C 1884 nt13.42□□□□□ -0.26
SDT1P53078 RPN10YHR200W 807 nt13.38□□□□□ -0.27
SDT1P53078 OPI9YLR338W 858 nt13.34□□□□□ -0.27
SDT1P53078 YNL208WYNL208W 600 nt13.32□□□□□ -0.28
SDT1P53078 SAH1YER043C 1350 nt13.22□□□□□ -0.29
SDT1P53078 ARE1YCR048W 1833 nt13.16□□□□□ -0.3
SDT1P53078 PST2YDR032C 597 nt13.14□□□□□ -0.31
SDT1P53078 YHR049C-AYHR049C-A 297 nt13.01□□□□□ -0.33
SDT1P53078 TIR1YER011W 765 nt12.99□□□□□ -0.33
SDT1P53078 PUN1YLR414C 792 nt12.99□□□□□ -0.33
SDT1P53078 POA1YBR022W 534 nt12.99□□□□□ -0.33
SDT1P53078 YJR018WYJR018W 363 nt12.89□□□□□ -0.35
SDT1P53078 SSA1YAL005C 1929 nt12.8□□□□□ -0.36
SDT1P53078 PTC2YER089C 1395 nt12.78□□□□□ -0.36
SDT1P53078 BSC6YOL137W 1494 nt12.73□□□□□ -0.37
SDT1P53078 BUD23YCR047C 828 nt12.71□□□□□ -0.37
SDT1P53078 RPP2BYDR382W 333 nt12.68□□□□□ -0.38
SDT1P53078 NAB2YGL122C 1578 nt12.65□□□□□ -0.38
SDT1P53078 YKL097CYKL097C 411 nt12.64□□□□□ -0.39
SDT1P53078 YJR120WYJR120W 351 nt12.62□□□□□ -0.39
SDT1P53078 SHU1YHL006C 453 nt12.59□□□□□ -0.39
SDT1P53078 SRB2YHR041C 633 nt12.52□□□□□ -0.41
SDT1P53078 DAL1YIR027C 1383 nt12.48□□□□□ -0.41
SDT1P53078 INM2YDR287W 879 nt12.48□□□□□ -0.41
SDT1P53078 FIS1YIL065C 468 nt12.44□□□□□ -0.42
SDT1P53078 FPR4YLR449W 1179 nt12.42□□□□□ -0.42
SDT1P53078 YGR021WYGR021W 873 nt12.39□□□□□ -0.43
SDT1P53078 BDH2YAL061W 1254 nt12.39□□□□□ -0.43
SDT1P53078 WWM1YFL010C 636 nt12.37□□□□□ -0.43
SDT1P53078 YAL037C-BYAL037C-B 975 nt12.37□□□□□ -0.43
SDT1P53078 PHO4YFR034C 939 nt12.34□□□□□ -0.43
SDT1P53078 YBL100CYBL100C 315 nt12.33□□□□□ -0.44
SDT1P53078 HOM6YJR139C 1080 nt12.28□□□□□ -0.44
SDT1P53078 YFL021C-AYFL021C-A 855 nt12.25□□□□□ -0.45
SDT1P53078 LSM3YLR438C-A 270 nt12.24□□□□□ -0.45
SDT1P53078 MNP1YGL068W 585 nt12.18□□□□□ -0.46
SDT1P53078 FUN26YAL022C 1554 nt12.17□□□□□ -0.46
SDT1P53078 TRM9YML014W 840 nt12.16□□□□□ -0.46
SDT1P53078 RKM5YLR137W 1104 nt12.11□□□□□ -0.47
SDT1P53078 YPS1YLR120C 1710 nt12.11□□□□□ -0.47
SDT1P53078 SPT5YML010W 3192 nt12.1□□□□□ -0.47
SDT1P53078 YOR139CYOR139C 393 nt12.07□□□□□ -0.48
SDT1P53078 YOL037CYOL037C 354 nt12.06□□□□□ -0.48
SDT1P53078 NPL3YDR432W 1245 nt12.05□□□□□ -0.48
SDT1P53078 YDR095CYDR095C 411 nt12.04□□□□□ -0.48
SDT1P53078 ALF1YNL148C 765 nt12.04□□□□□ -0.48
SDT1P53078 CCT6YDR188W 1641 nt12.04□□□□□ -0.48
SDT1P53078 YHR165W-AYHR165W-A 312 nt12□□□□□ -0.49
SDT1P53078 SUF2tP(AGG)C 72 nt11.99□□□□□ -0.49
SDT1P53078 SUF10tP(AGG)N 72 nt11.99□□□□□ -0.49
SDT1P53078 MEP2YNL142W 1500 nt11.96□□□□□ -0.49
SDT1P53078 SSA4YER103W 1929 nt11.95□□□□□ -0.5
SDT1P53078 SIS1YNL007C 1059 nt11.83□□□□□ -0.52
SDT1P53078 RPP2AYOL039W 321 nt11.82□□□□□ -0.52
SDT1P53078 DCW1YKL046C 1350 nt11.72□□□□□ -0.53
SDT1P53078 YLR281CYLR281C 468 nt11.72□□□□□ -0.53
SDT1P53078 PTP1YDL230W 1008 nt11.71□□□□□ -0.53
SDT1P53078 YLR154C-GYLR154C-G 150 nt11.69□□□□□ -0.54
SDT1P53078 WHI5YOR083W 888 nt11.69□□□□□ -0.54
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms