Protein–RNA interactions for Protein: Q01939

RPT6, 26S proteasome regulatory subunit 8 homolog, yeastyeast

Known RBP Predictions only

Length 405 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT6Q01939 YML009W-BYML009W-B 477 nt23.64■■□□□ 1.37
RPT6Q01939 NSR1YGR159C 1245 nt23.35■■□□□ 1.33
RPT6Q01939 NOP1YDL014W 984 nt23.01■■□□□ 1.27
RPT6Q01939 YKL036CYKL036C 393 nt21.37■■□□□ 1.01
RPT6Q01939 MDJ1YFL016C 1536 nt20.63■□□□□ 0.89
RPT6Q01939 Q0297Q0297 156 nt20.19■□□□□ 0.82
RPT6Q01939 SRX1YKL086W 384 nt20.11■□□□□ 0.81
RPT6Q01939 YJL027CYJL027C 417 nt19.99■□□□□ 0.79
RPT6Q01939 SCS3YGL126W 1143 nt19.53■□□□□ 0.72
RPT6Q01939 YCR051WYCR051W 669 nt19.12■□□□□ 0.65
RPT6Q01939 YOL085CYOL085C 342 nt18.52■□□□□ 0.56
RPT6Q01939 DBP2YNL112W 1641 nt18.3■□□□□ 0.52
RPT6Q01939 PKP1YIL042C 1185 nt18.24■□□□□ 0.51
RPT6Q01939 RPP1BYDL130W 321 nt18.12■□□□□ 0.49
RPT6Q01939 TRN1tP(UGG)A 72 nt18.1■□□□□ 0.49
RPT6Q01939 SUF9tP(UGG)F 72 nt18.1■□□□□ 0.49
RPT6Q01939 SUF8tP(UGG)H 72 nt18.1■□□□□ 0.49
RPT6Q01939 tP(UGG)LtP(UGG)L 72 nt18.1■□□□□ 0.49
RPT6Q01939 SUF7tP(UGG)M 72 nt18.1■□□□□ 0.49
RPT6Q01939 tP(UGG)N1tP(UGG)N1 72 nt18.1■□□□□ 0.49
RPT6Q01939 tP(UGG)N2tP(UGG)N2 72 nt18.1■□□□□ 0.49
RPT6Q01939 tP(UGG)O1tP(UGG)O1 72 nt18.1■□□□□ 0.49
RPT6Q01939 SUF11tP(UGG)O2 72 nt18.1■□□□□ 0.49
RPT6Q01939 CCC1YLR220W 969 nt17.97■□□□□ 0.47
RPT6Q01939 YBR190WYBR190W 312 nt17.53■□□□□ 0.4
RPT6Q01939 ATS1YAL020C 1002 nt17.51■□□□□ 0.39
RPT6Q01939 SCJ1YMR214W 1134 nt17.42■□□□□ 0.38
RPT6Q01939 PET122YER153C 765 nt17.31■□□□□ 0.36
RPT6Q01939 RVS167YDR388W 1449 nt17.23■□□□□ 0.35
RPT6Q01939 RTC3YHR087W 336 nt17.19■□□□□ 0.34
RPT6Q01939 tP(UGG)O3tP(UGG)O3 72 nt17.18■□□□□ 0.34
RPT6Q01939 SCR1SCR1 522 nt17.15■□□□□ 0.34
RPT6Q01939 RRN5YLR141W 1092 nt16.84■□□□□ 0.29
RPT6Q01939 SHR5YOL110W 714 nt16.65■□□□□ 0.26
RPT6Q01939 YDJ1YNL064C 1230 nt16.6■□□□□ 0.25
RPT6Q01939 RSB1YOR049C 1065 nt16.53■□□□□ 0.24
RPT6Q01939 YER088W-BYER088W-B 147 nt16.5■□□□□ 0.23
RPT6Q01939 GAR1YHR089C 618 nt16.25■□□□□ 0.19
RPT6Q01939 PST2YDR032C 597 nt16.19■□□□□ 0.18
RPT6Q01939 DEP1YAL013W 1218 nt16.18■□□□□ 0.18
RPT6Q01939 URN1YPR152C 1398 nt16.13■□□□□ 0.17
RPT6Q01939 YNL208WYNL208W 600 nt15.91■□□□□ 0.14
RPT6Q01939 RPN10YHR200W 807 nt15.9■□□□□ 0.14
RPT6Q01939 OPI9YLR338W 858 nt15.85■□□□□ 0.13
RPT6Q01939 PUT4YOR348C 1884 nt15.82■□□□□ 0.12
RPT6Q01939 SAH1YER043C 1350 nt15.74■□□□□ 0.11
RPT6Q01939 TIR1YER011W 765 nt15.68■□□□□ 0.1
RPT6Q01939 YKL097CYKL097C 411 nt15.61■□□□□ 0.09
RPT6Q01939 ARE1YCR048W 1833 nt15.59■□□□□ 0.09
RPT6Q01939 SHU1YHL006C 453 nt15.5■□□□□ 0.07
RPT6Q01939 SSA1YAL005C 1929 nt15.47■□□□□ 0.07
RPT6Q01939 YJR018WYJR018W 363 nt15.39■□□□□ 0.05
RPT6Q01939 PUN1YLR414C 792 nt15.39■□□□□ 0.05
RPT6Q01939 YHR049C-AYHR049C-A 297 nt15.38■□□□□ 0.05
RPT6Q01939 POA1YBR022W 534 nt15.36■□□□□ 0.05
RPT6Q01939 SRB2YHR041C 633 nt15.26■□□□□ 0.03
RPT6Q01939 YAL037C-BYAL037C-B 975 nt15.26■□□□□ 0.03
RPT6Q01939 SSA3YBL075C 1950 nt15.21■□□□□ 0.03
RPT6Q01939 PTC2YER089C 1395 nt15.2■□□□□ 0.02
RPT6Q01939 YJR120WYJR120W 351 nt15.18■□□□□ 0.02
RPT6Q01939 RPP2BYDR382W 333 nt15.11■□□□□ 0.01
RPT6Q01939 BUD23YCR047C 828 nt15.06■□□□□ 0
RPT6Q01939 WWM1YFL010C 636 nt15.03■□□□□ -0
RPT6Q01939 BSC6YOL137W 1494 nt14.98□□□□□ -0.01
RPT6Q01939 YOR139CYOR139C 393 nt14.97□□□□□ -0.01
RPT6Q01939 NAB2YGL122C 1578 nt14.96□□□□□ -0.01
RPT6Q01939 YGR021WYGR021W 873 nt14.95□□□□□ -0.02
RPT6Q01939 HOM6YJR139C 1080 nt14.92□□□□□ -0.02
RPT6Q01939 MNP1YGL068W 585 nt14.88□□□□□ -0.03
RPT6Q01939 BDH2YAL061W 1254 nt14.83□□□□□ -0.04
RPT6Q01939 INM2YDR287W 879 nt14.81□□□□□ -0.04
RPT6Q01939 NPL3YDR432W 1245 nt14.81□□□□□ -0.04
RPT6Q01939 FPR4YLR449W 1179 nt14.8□□□□□ -0.04
RPT6Q01939 DAL1YIR027C 1383 nt14.8□□□□□ -0.04
RPT6Q01939 FIS1YIL065C 468 nt14.76□□□□□ -0.05
RPT6Q01939 YFL021C-AYFL021C-A 855 nt14.75□□□□□ -0.05
RPT6Q01939 RKM5YLR137W 1104 nt14.7□□□□□ -0.06
RPT6Q01939 YBL100CYBL100C 315 nt14.7□□□□□ -0.06
RPT6Q01939 LSM3YLR438C-A 270 nt14.66□□□□□ -0.06
RPT6Q01939 YOL037CYOL037C 354 nt14.66□□□□□ -0.06
RPT6Q01939 PHO4YFR034C 939 nt14.65□□□□□ -0.06
RPT6Q01939 TRM9YML014W 840 nt14.54□□□□□ -0.08
RPT6Q01939 FUN26YAL022C 1554 nt14.54□□□□□ -0.08
RPT6Q01939 tM(CAU)CtM(CAU)C 72 nt14.38□□□□□ -0.11
RPT6Q01939 IMT4tM(CAU)E 72 nt14.38□□□□□ -0.11
RPT6Q01939 IMT3tM(CAU)J3 72 nt14.38□□□□□ -0.11
RPT6Q01939 IMT1tM(CAU)O1 72 nt14.38□□□□□ -0.11
RPT6Q01939 IMT2tM(CAU)P 72 nt14.38□□□□□ -0.11
RPT6Q01939 CCT6YDR188W 1641 nt14.37□□□□□ -0.11
RPT6Q01939 YLR281CYLR281C 468 nt14.33□□□□□ -0.12
RPT6Q01939 YPS1YLR120C 1710 nt14.32□□□□□ -0.12
RPT6Q01939 ALF1YNL148C 765 nt14.3□□□□□ -0.12
RPT6Q01939 WHI5YOR083W 888 nt14.27□□□□□ -0.13
RPT6Q01939 PUS2YGL063W 1113 nt14.25□□□□□ -0.13
RPT6Q01939 YDR095CYDR095C 411 nt14.24□□□□□ -0.13
RPT6Q01939 SUF2tP(AGG)C 72 nt14.23□□□□□ -0.13
RPT6Q01939 SUF10tP(AGG)N 72 nt14.23□□□□□ -0.13
RPT6Q01939 SPT5YML010W 3192 nt14.22□□□□□ -0.13
RPT6Q01939 YHR165W-AYHR165W-A 312 nt14.16□□□□□ -0.14
RPT6Q01939 YLR154C-GYLR154C-G 150 nt14.13□□□□□ -0.15
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms