RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF5	YLR175W	TRK2	P28584	889 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	EFT1	P32324	842 aa	Known RBP	4.98	□□□□□ -1.61
CBF5	YLR175W	YET1	P35723	206 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	GPT2	P36148	743 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	VRP1	P37370	817 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	CTM1	P38818	585 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	UBP5	P39944	805 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	PSF2	P40359	213 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	EMW1	P42842	904 aa	Known RBP	4.98	□□□□□ -1.61
CBF5	YLR175W	SCS3	P53012	380 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	TOF1	P53840	1238 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	VPS75	P53853	264 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	SVF1	Q05515	481 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	HDA3	Q06623	655 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	PUN1	Q06991	263 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	YAP7	Q08182	245 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	YOL075C	Q08234	1294 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	YLL058W	Q12198	575 aa		4.98	□□□□□ -1.61
CBF5	YLR175W	SNA3	P14359	133 aa		4.97	□□□□□ -1.61
CBF5	YLR175W	UBC1	P21734	215 aa	Known RBP	4.97	□□□□□ -1.61
CBF5	YLR175W	DAL7	P21826	554 aa		4.97	□□□□□ -1.61
CBF5	YLR175W	CDC48	P25694	835 aa	Known RBP	4.97	□□□□□ -1.61
CBF5	YLR175W	SPC110	P32380	944 aa		4.97	□□□□□ -1.61
CBF5	YLR175W	MNN4	P36044	1178 aa		4.97	□□□□□ -1.61
CBF5	YLR175W	FLR1	P38124	548 aa		4.97	□□□□□ -1.61
CBF5	YLR175W	TOS3	P43637	560 aa		4.97	□□□□□ -1.61
CBF5	YLR175W	FYV8	P46949	817 aa	Known RBP	4.97	□□□□□ -1.61
CBF5	YLR175W	PNP1	Q05788	311 aa		4.97	□□□□□ -1.61
CBF5	YLR175W	GPI13	Q07830	1017 aa		4.97	□□□□□ -1.61
CBF5	YLR175W	RLP24	Q07915	199 aa	Known RBP	4.97	□□□□□ -1.61
CBF5	YLR175W	CDC53	Q12018	815 aa	Known RBP	4.97	□□□□□ -1.61
CBF5	YLR175W	RPS6A	P0CX37	236 aa	Known RBP	4.96	□□□□□ -1.62
CBF5	YLR175W	RPS6B	P0CX38	236 aa	Predicted RBP	4.96	□□□□□ -1.62
CBF5	YLR175W	AFT1	P22149	690 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	APL1	P27351	700 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	NAM7	P30771	971 aa	Known RBP	4.96	□□□□□ -1.62
CBF5	YLR175W	IRE1	P32361	1115 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	DPH2	P32461	534 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	BCS1	P32839	456 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	YEL1	P34225	687 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	SHM1	P37292	490 aa	Predicted RBP	4.96	□□□□□ -1.62
CBF5	YLR175W	KSP1	P38691	1029 aa	Known RBP	4.96	□□□□□ -1.62
CBF5	YLR175W	MIP6	P38760	659 aa	Known RBP	4.96	□□□□□ -1.62
CBF5	YLR175W	ERP5	P38819	212 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	LCB2	P40970	561 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	CCM1	P48237	864 aa	Predicted RBP	4.96	□□□□□ -1.62
CBF5	YLR175W	PSP2	P50109	593 aa	Known RBP	4.96	□□□□□ -1.62
CBF5	YLR175W	SHE10	P53075	577 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	RTT102	P53330	157 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	MSC2	Q03455	724 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	DON1	Q05610	365 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	NOC3	Q07896	663 aa	Predicted RBP	4.96	□□□□□ -1.62
CBF5	YLR175W	IES4	Q08561	116 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	YPL216W	Q08964	1102 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	PLP2	Q12017	286 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	FAL1	Q12099	399 aa	Known RBP	4.96	□□□□□ -1.62
CBF5	YLR175W	SUT2	Q12286	268 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	HIF1	Q12373	385 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	YDR461C-A	Q2V2P7	80 aa		4.96	□□□□□ -1.62
CBF5	YLR175W	SSB1	P11484	613 aa	Known RBP	4.95	□□□□□ -1.62
CBF5	YLR175W	CYC8	P14922	966 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	SDH2	P21801	266 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	MSH3	P25336	1018 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	SMY2	P32909	740 aa	Known RBP	4.95	□□□□□ -1.62
CBF5	YLR175W	EAF5	P39995	279 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	SSB2	P40150	613 aa	Known RBP	4.95	□□□□□ -1.62
CBF5	YLR175W	SKP2	P42843	763 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	AVT1	P47082	602 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	JJJ3	P47138	172 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	YJR107W	P47145	328 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	COS5	P47187	383 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	HFM1	P51979	1187 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	TAM41	P53230	385 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	CUS1	Q02554	436 aa	Predicted RBP	4.95	□□□□□ -1.62
CBF5	YLR175W	ULP1	Q02724	621 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	ISU1	Q03020	165 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	ECM7	Q06200	448 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	SPO75	Q07798	868 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	HFI1	Q12060	488 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	OSW2	Q12202	724 aa		4.95	□□□□□ -1.62
CBF5	YLR175W	MDM20	Q12387	796 aa	Known RBP	4.95	□□□□□ -1.62
CBF5	YLR175W	FUR4	P05316	633 aa	Known RBP	4.94	□□□□□ -1.62
CBF5	YLR175W	MAS2	P11914	482 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	SEC65	P29478	273 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	TMT1	P32643	299 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	KTR2	P33550	425 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	SPT8	P38915	602 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	AFG3	P39925	761 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	VFA1	P40080	203 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	SDS3	P40505	327 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	BRE5	P53741	515 aa	Known RBP	4.94	□□□□□ -1.62
CBF5	YLR175W	YNL146W	P53906	100 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	DAK1	P54838	584 aa	Known RBP	4.94	□□□□□ -1.62
CBF5	YLR175W	CTR9	P89105	1077 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	VTC3	Q02725	835 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	GIR2	Q03768	265 aa	Predicted RBP	4.94	□□□□□ -1.62
CBF5	YLR175W	NEW1	Q08972	1196 aa	Known RBP	4.94	□□□□□ -1.62
CBF5	YLR175W	HMI1	Q12039	706 aa		4.94	□□□□□ -1.62
CBF5	YLR175W	CWC2	Q12046	339 aa	Predicted RBP	4.94	□□□□□ -1.62
CBF5	YLR175W	ATG11	Q12527	1178 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms