Protein–RNA interactions for Protein: Q02725

VTC3, Vacuolar transporter chaperone 3, yeastyeast

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTC3Q02725 YML009W-BYML009W-B 477 nt22.36■■□□□ 1.17
VTC3Q02725 NSR1YGR159C 1245 nt22.1■■□□□ 1.13
VTC3Q02725 NOP1YDL014W 984 nt21.76■■□□□ 1.07
VTC3Q02725 YKL036CYKL036C 393 nt20.19■□□□□ 0.82
VTC3Q02725 MDJ1YFL016C 1536 nt19.55■□□□□ 0.72
VTC3Q02725 Q0297Q0297 156 nt19.08■□□□□ 0.64
VTC3Q02725 SRX1YKL086W 384 nt19.02■□□□□ 0.64
VTC3Q02725 YJL027CYJL027C 417 nt18.87■□□□□ 0.61
VTC3Q02725 SCS3YGL126W 1143 nt18.43■□□□□ 0.54
VTC3Q02725 YCR051WYCR051W 669 nt18.07■□□□□ 0.48
VTC3Q02725 YOL085CYOL085C 342 nt17.49■□□□□ 0.39
VTC3Q02725 DBP2YNL112W 1641 nt17.34■□□□□ 0.37
VTC3Q02725 PKP1YIL042C 1185 nt17.24■□□□□ 0.35
VTC3Q02725 RPP1BYDL130W 321 nt17.13■□□□□ 0.33
VTC3Q02725 TRN1tP(UGG)A 72 nt17.13■□□□□ 0.33
VTC3Q02725 SUF9tP(UGG)F 72 nt17.13■□□□□ 0.33
VTC3Q02725 SUF8tP(UGG)H 72 nt17.13■□□□□ 0.33
VTC3Q02725 tP(UGG)LtP(UGG)L 72 nt17.13■□□□□ 0.33
VTC3Q02725 SUF7tP(UGG)M 72 nt17.13■□□□□ 0.33
VTC3Q02725 tP(UGG)N1tP(UGG)N1 72 nt17.13■□□□□ 0.33
VTC3Q02725 tP(UGG)N2tP(UGG)N2 72 nt17.13■□□□□ 0.33
VTC3Q02725 tP(UGG)O1tP(UGG)O1 72 nt17.13■□□□□ 0.33
VTC3Q02725 SUF11tP(UGG)O2 72 nt17.13■□□□□ 0.33
VTC3Q02725 CCC1YLR220W 969 nt16.99■□□□□ 0.31
VTC3Q02725 YBR190WYBR190W 312 nt16.62■□□□□ 0.25
VTC3Q02725 ATS1YAL020C 1002 nt16.52■□□□□ 0.24
VTC3Q02725 SCJ1YMR214W 1134 nt16.43■□□□□ 0.22
VTC3Q02725 PET122YER153C 765 nt16.37■□□□□ 0.21
VTC3Q02725 RVS167YDR388W 1449 nt16.31■□□□□ 0.2
VTC3Q02725 RTC3YHR087W 336 nt16.28■□□□□ 0.2
VTC3Q02725 tP(UGG)O3tP(UGG)O3 72 nt16.26■□□□□ 0.19
VTC3Q02725 SCR1SCR1 522 nt16.21■□□□□ 0.19
VTC3Q02725 RRN5YLR141W 1092 nt15.91■□□□□ 0.14
VTC3Q02725 SSA3YBL075C 1950 nt15.78■□□□□ 0.12
VTC3Q02725 SHR5YOL110W 714 nt15.78■□□□□ 0.12
VTC3Q02725 YDJ1YNL064C 1230 nt15.71■□□□□ 0.11
VTC3Q02725 RSB1YOR049C 1065 nt15.62■□□□□ 0.09
VTC3Q02725 YER088W-BYER088W-B 147 nt15.59■□□□□ 0.09
VTC3Q02725 PUT4YOR348C 1884 nt15.39■□□□□ 0.05
VTC3Q02725 GAR1YHR089C 618 nt15.36■□□□□ 0.05
VTC3Q02725 DEP1YAL013W 1218 nt15.32■□□□□ 0.04
VTC3Q02725 URN1YPR152C 1398 nt15.27■□□□□ 0.04
VTC3Q02725 PST2YDR032C 597 nt15.27■□□□□ 0.04
VTC3Q02725 YNL208WYNL208W 600 nt15.07■□□□□ 0
VTC3Q02725 RPN10YHR200W 807 nt15.05■□□□□ -0
VTC3Q02725 OPI9YLR338W 858 nt15.02■□□□□ -0
VTC3Q02725 ARE1YCR048W 1833 nt14.94□□□□□ -0.02
VTC3Q02725 POA1YBR022W 534 nt14.94□□□□□ -0.02
VTC3Q02725 SAH1YER043C 1350 nt14.91□□□□□ -0.02
VTC3Q02725 TIR1YER011W 765 nt14.84□□□□□ -0.03
VTC3Q02725 YHR049C-AYHR049C-A 297 nt14.8□□□□□ -0.04
VTC3Q02725 YKL097CYKL097C 411 nt14.73□□□□□ -0.05
VTC3Q02725 BSC6YOL137W 1494 nt14.7□□□□□ -0.06
VTC3Q02725 SSA1YAL005C 1929 nt14.64□□□□□ -0.07
VTC3Q02725 SHU1YHL006C 453 nt14.64□□□□□ -0.07
VTC3Q02725 PUN1YLR414C 792 nt14.58□□□□□ -0.08
VTC3Q02725 YJR018WYJR018W 363 nt14.57□□□□□ -0.08
VTC3Q02725 BUD23YCR047C 828 nt14.47□□□□□ -0.09
VTC3Q02725 SRB2YHR041C 633 nt14.43□□□□□ -0.1
VTC3Q02725 PTC2YER089C 1395 nt14.4□□□□□ -0.1
VTC3Q02725 YAL037C-BYAL037C-B 975 nt14.39□□□□□ -0.11
VTC3Q02725 YJR120WYJR120W 351 nt14.38□□□□□ -0.11
VTC3Q02725 RPP2BYDR382W 333 nt14.31□□□□□ -0.12
VTC3Q02725 SPT5YML010W 3192 nt14.31□□□□□ -0.12
VTC3Q02725 WWM1YFL010C 636 nt14.21□□□□□ -0.13
VTC3Q02725 NAB2YGL122C 1578 nt14.18□□□□□ -0.14
VTC3Q02725 SSA4YER103W 1929 nt14.17□□□□□ -0.14
VTC3Q02725 YGR021WYGR021W 873 nt14.14□□□□□ -0.15
VTC3Q02725 YOR139CYOR139C 393 nt14.13□□□□□ -0.15
VTC3Q02725 HOM6YJR139C 1080 nt14.11□□□□□ -0.15
VTC3Q02725 MNP1YGL068W 585 nt14.08□□□□□ -0.16
VTC3Q02725 BDH2YAL061W 1254 nt14.04□□□□□ -0.16
VTC3Q02725 INM2YDR287W 879 nt14.03□□□□□ -0.16
VTC3Q02725 DAL1YIR027C 1383 nt14.02□□□□□ -0.17
VTC3Q02725 FPR4YLR449W 1179 nt14.01□□□□□ -0.17
VTC3Q02725 FIS1YIL065C 468 nt14□□□□□ -0.17
VTC3Q02725 NPL3YDR432W 1245 nt13.99□□□□□ -0.17
VTC3Q02725 YFL021C-AYFL021C-A 855 nt13.96□□□□□ -0.17
VTC3Q02725 YBL100CYBL100C 315 nt13.93□□□□□ -0.18
VTC3Q02725 PHO4YFR034C 939 nt13.9□□□□□ -0.18
VTC3Q02725 RKM5YLR137W 1104 nt13.9□□□□□ -0.18
VTC3Q02725 LSM3YLR438C-A 270 nt13.87□□□□□ -0.19
VTC3Q02725 YOL037CYOL037C 354 nt13.85□□□□□ -0.19
VTC3Q02725 MEP2YNL142W 1500 nt13.82□□□□□ -0.2
VTC3Q02725 FUN26YAL022C 1554 nt13.77□□□□□ -0.21
VTC3Q02725 TRM9YML014W 840 nt13.76□□□□□ -0.21
VTC3Q02725 DCW1YKL046C 1350 nt13.65□□□□□ -0.22
VTC3Q02725 YPS1YLR120C 1710 nt13.63□□□□□ -0.23
VTC3Q02725 BDF1YLR399C 2061 nt13.63□□□□□ -0.23
VTC3Q02725 CCT6YDR188W 1641 nt13.61□□□□□ -0.23
VTC3Q02725 YHR165W-AYHR165W-A 312 nt13.59□□□□□ -0.23
VTC3Q02725 tM(CAU)CtM(CAU)C 72 nt13.57□□□□□ -0.24
VTC3Q02725 IMT4tM(CAU)E 72 nt13.57□□□□□ -0.24
VTC3Q02725 IMT3tM(CAU)J3 72 nt13.57□□□□□ -0.24
VTC3Q02725 IMT1tM(CAU)O1 72 nt13.57□□□□□ -0.24
VTC3Q02725 IMT2tM(CAU)P 72 nt13.57□□□□□ -0.24
VTC3Q02725 YLR281CYLR281C 468 nt13.54□□□□□ -0.24
VTC3Q02725 ALF1YNL148C 765 nt13.54□□□□□ -0.24
VTC3Q02725 YDR095CYDR095C 411 nt13.51□□□□□ -0.25
VTC3Q02725 SUF2tP(AGG)C 72 nt13.48□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms