Protein–RNA interactions for Protein: P40505

SDS3, Transcriptional regulatory protein SDS3, yeastyeast

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS3P40505 YML009W-BYML009W-B 477 nt22■■□□□ 1.11
SDS3P40505 NSR1YGR159C 1245 nt21.89■■□□□ 1.09
SDS3P40505 NOP1YDL014W 984 nt21.27■■□□□ 1
SDS3P40505 MDJ1YFL016C 1536 nt19.67■□□□□ 0.74
SDS3P40505 YKL036CYKL036C 393 nt19.48■□□□□ 0.71
SDS3P40505 SRX1YKL086W 384 nt18.56■□□□□ 0.56
SDS3P40505 Q0297Q0297 156 nt18.51■□□□□ 0.55
SDS3P40505 YJL027CYJL027C 417 nt18.2■□□□□ 0.5
SDS3P40505 YCR051WYCR051W 669 nt17.68■□□□□ 0.42
SDS3P40505 SCS3YGL126W 1143 nt17.66■□□□□ 0.42
SDS3P40505 DBP2YNL112W 1641 nt17.26■□□□□ 0.35
SDS3P40505 TRN1tP(UGG)A 72 nt16.87■□□□□ 0.29
SDS3P40505 SUF9tP(UGG)F 72 nt16.87■□□□□ 0.29
SDS3P40505 SUF8tP(UGG)H 72 nt16.87■□□□□ 0.29
SDS3P40505 tP(UGG)LtP(UGG)L 72 nt16.87■□□□□ 0.29
SDS3P40505 SUF7tP(UGG)M 72 nt16.87■□□□□ 0.29
SDS3P40505 tP(UGG)N1tP(UGG)N1 72 nt16.87■□□□□ 0.29
SDS3P40505 tP(UGG)N2tP(UGG)N2 72 nt16.87■□□□□ 0.29
SDS3P40505 tP(UGG)O1tP(UGG)O1 72 nt16.87■□□□□ 0.29
SDS3P40505 SUF11tP(UGG)O2 72 nt16.87■□□□□ 0.29
SDS3P40505 YOL085CYOL085C 342 nt16.86■□□□□ 0.29
SDS3P40505 CCC1YLR220W 969 nt16.81■□□□□ 0.28
SDS3P40505 YBR190WYBR190W 312 nt16.74■□□□□ 0.27
SDS3P40505 PKP1YIL042C 1185 nt16.71■□□□□ 0.27
SDS3P40505 RPP1BYDL130W 321 nt16.64■□□□□ 0.25
SDS3P40505 RTC3YHR087W 336 nt16.48■□□□□ 0.23
SDS3P40505 RVS167YDR388W 1449 nt16.27■□□□□ 0.19
SDS3P40505 SCJ1YMR214W 1134 nt16.13■□□□□ 0.17
SDS3P40505 PET122YER153C 765 nt15.95■□□□□ 0.14
SDS3P40505 tP(UGG)O3tP(UGG)O3 72 nt15.93■□□□□ 0.14
SDS3P40505 SCR1SCR1 522 nt15.75■□□□□ 0.11
SDS3P40505 ATS1YAL020C 1002 nt15.72■□□□□ 0.11
SDS3P40505 SHR5YOL110W 714 nt15.62■□□□□ 0.09
SDS3P40505 RRN5YLR141W 1092 nt15.47■□□□□ 0.07
SDS3P40505 YDJ1YNL064C 1230 nt15.37■□□□□ 0.05
SDS3P40505 DEP1YAL013W 1218 nt15.32■□□□□ 0.04
SDS3P40505 URN1YPR152C 1398 nt15.32■□□□□ 0.04
SDS3P40505 PUT4YOR348C 1884 nt15.31■□□□□ 0.04
SDS3P40505 YER088W-BYER088W-B 147 nt15.16■□□□□ 0.02
SDS3P40505 RSB1YOR049C 1065 nt15.15■□□□□ 0.02
SDS3P40505 GAR1YHR089C 618 nt15.14■□□□□ 0.01
SDS3P40505 SAH1YER043C 1350 nt15.08■□□□□ 0
SDS3P40505 OPI9YLR338W 858 nt15.07■□□□□ 0
SDS3P40505 RPN10YHR200W 807 nt15.04■□□□□ -0
SDS3P40505 ARE1YCR048W 1833 nt15.01□□□□□ -0.01
SDS3P40505 YNL208WYNL208W 600 nt14.99□□□□□ -0.01
SDS3P40505 POA1YBR022W 534 nt14.89□□□□□ -0.03
SDS3P40505 YHR049C-AYHR049C-A 297 nt14.87□□□□□ -0.03
SDS3P40505 SSA3YBL075C 1950 nt14.73□□□□□ -0.05
SDS3P40505 PUN1YLR414C 792 nt14.65□□□□□ -0.06
SDS3P40505 TIR1YER011W 765 nt14.61□□□□□ -0.07
SDS3P40505 YJR018WYJR018W 363 nt14.59□□□□□ -0.07
SDS3P40505 BSC6YOL137W 1494 nt14.57□□□□□ -0.08
SDS3P40505 BUD23YCR047C 828 nt14.56□□□□□ -0.08
SDS3P40505 PST2YDR032C 597 nt14.56□□□□□ -0.08
SDS3P40505 PTC2YER089C 1395 nt14.54□□□□□ -0.08
SDS3P40505 SSA1YAL005C 1929 nt14.46□□□□□ -0.09
SDS3P40505 NAB2YGL122C 1578 nt14.33□□□□□ -0.12
SDS3P40505 YJR120WYJR120W 351 nt14.29□□□□□ -0.12
SDS3P40505 RPP2BYDR382W 333 nt14.28□□□□□ -0.12
SDS3P40505 SRB2YHR041C 633 nt14.19□□□□□ -0.14
SDS3P40505 FPR4YLR449W 1179 nt14.19□□□□□ -0.14
SDS3P40505 DAL1YIR027C 1383 nt14.12□□□□□ -0.15
SDS3P40505 FIS1YIL065C 468 nt14.11□□□□□ -0.15
SDS3P40505 INM2YDR287W 879 nt14.06□□□□□ -0.16
SDS3P40505 SHU1YHL006C 453 nt14.05□□□□□ -0.16
SDS3P40505 PHO4YFR034C 939 nt14□□□□□ -0.17
SDS3P40505 YKL097CYKL097C 411 nt13.97□□□□□ -0.17
SDS3P40505 WWM1YFL010C 636 nt13.96□□□□□ -0.17
SDS3P40505 YAL037C-BYAL037C-B 975 nt13.95□□□□□ -0.18
SDS3P40505 YBL100CYBL100C 315 nt13.95□□□□□ -0.18
SDS3P40505 BDH2YAL061W 1254 nt13.92□□□□□ -0.18
SDS3P40505 SPT5YML010W 3192 nt13.84□□□□□ -0.19
SDS3P40505 YGR021WYGR021W 873 nt13.79□□□□□ -0.2
SDS3P40505 FUN26YAL022C 1554 nt13.76□□□□□ -0.21
SDS3P40505 YPS1YLR120C 1710 nt13.75□□□□□ -0.21
SDS3P40505 HOM6YJR139C 1080 nt13.73□□□□□ -0.21
SDS3P40505 TRM9YML014W 840 nt13.72□□□□□ -0.21
SDS3P40505 MNP1YGL068W 585 nt13.71□□□□□ -0.21
SDS3P40505 YFL021C-AYFL021C-A 855 nt13.69□□□□□ -0.22
SDS3P40505 YHR165W-AYHR165W-A 312 nt13.68□□□□□ -0.22
SDS3P40505 LSM3YLR438C-A 270 nt13.68□□□□□ -0.22
SDS3P40505 MEP2YNL142W 1500 nt13.66□□□□□ -0.22
SDS3P40505 ALF1YNL148C 765 nt13.64□□□□□ -0.23
SDS3P40505 YDR095CYDR095C 411 nt13.63□□□□□ -0.23
SDS3P40505 RKM5YLR137W 1104 nt13.55□□□□□ -0.24
SDS3P40505 CCT6YDR188W 1641 nt13.54□□□□□ -0.24
SDS3P40505 SSA4YER103W 1929 nt13.49□□□□□ -0.25
SDS3P40505 DCW1YKL046C 1350 nt13.48□□□□□ -0.25
SDS3P40505 SUF2tP(AGG)C 72 nt13.47□□□□□ -0.25
SDS3P40505 SUF10tP(AGG)N 72 nt13.47□□□□□ -0.25
SDS3P40505 RPP2AYOL039W 321 nt13.4□□□□□ -0.26
SDS3P40505 YOR139CYOR139C 393 nt13.4□□□□□ -0.26
SDS3P40505 NPL3YDR432W 1245 nt13.38□□□□□ -0.27
SDS3P40505 YOL037CYOL037C 354 nt13.36□□□□□ -0.27
SDS3P40505 SIS1YNL007C 1059 nt13.34□□□□□ -0.27
SDS3P40505 PTP1YDL230W 1008 nt13.32□□□□□ -0.28
SDS3P40505 EMI2YDR516C 1503 nt13.3□□□□□ -0.28
SDS3P40505 CAC2YML102W 1407 nt13.28□□□□□ -0.28
SDS3P40505 YMR090WYMR090W 684 nt13.23□□□□□ -0.29
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms