Protein–RNA interactions for Protein: P0CX37

RPS6A, 40S ribosomal protein S6-A, yeastyeast

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS6AP0CX37 NSR1YGR159C 1245 nt22.14■■□□□ 1.13
RPS6AP0CX37 YML009W-BYML009W-B 477 nt22.08■■□□□ 1.13
RPS6AP0CX37 NOP1YDL014W 984 nt21.26■□□□□ 0.99
RPS6AP0CX37 MDJ1YFL016C 1536 nt20.02■□□□□ 0.79
RPS6AP0CX37 YKL036CYKL036C 393 nt19.42■□□□□ 0.7
RPS6AP0CX37 SRX1YKL086W 384 nt18.63■□□□□ 0.57
RPS6AP0CX37 Q0297Q0297 156 nt18.59■□□□□ 0.57
RPS6AP0CX37 YJL027CYJL027C 417 nt18.36■□□□□ 0.53
RPS6AP0CX37 YCR051WYCR051W 669 nt17.66■□□□□ 0.42
RPS6AP0CX37 DBP2YNL112W 1641 nt17.64■□□□□ 0.41
RPS6AP0CX37 SCS3YGL126W 1143 nt17.59■□□□□ 0.41
RPS6AP0CX37 YBR190WYBR190W 312 nt17.06■□□□□ 0.32
RPS6AP0CX37 TRN1tP(UGG)A 72 nt17.05■□□□□ 0.32
RPS6AP0CX37 SUF9tP(UGG)F 72 nt17.05■□□□□ 0.32
RPS6AP0CX37 SUF8tP(UGG)H 72 nt17.05■□□□□ 0.32
RPS6AP0CX37 tP(UGG)LtP(UGG)L 72 nt17.05■□□□□ 0.32
RPS6AP0CX37 SUF7tP(UGG)M 72 nt17.05■□□□□ 0.32
RPS6AP0CX37 tP(UGG)N1tP(UGG)N1 72 nt17.05■□□□□ 0.32
RPS6AP0CX37 tP(UGG)N2tP(UGG)N2 72 nt17.05■□□□□ 0.32
RPS6AP0CX37 tP(UGG)O1tP(UGG)O1 72 nt17.05■□□□□ 0.32
RPS6AP0CX37 SUF11tP(UGG)O2 72 nt17.05■□□□□ 0.32
RPS6AP0CX37 CCC1YLR220W 969 nt16.88■□□□□ 0.29
RPS6AP0CX37 YOL085CYOL085C 342 nt16.88■□□□□ 0.29
RPS6AP0CX37 PKP1YIL042C 1185 nt16.69■□□□□ 0.26
RPS6AP0CX37 RPP1BYDL130W 321 nt16.68■□□□□ 0.26
RPS6AP0CX37 RTC3YHR087W 336 nt16.66■□□□□ 0.26
RPS6AP0CX37 SCJ1YMR214W 1134 nt16.37■□□□□ 0.21
RPS6AP0CX37 RVS167YDR388W 1449 nt16.36■□□□□ 0.21
RPS6AP0CX37 tP(UGG)O3tP(UGG)O3 72 nt16.03■□□□□ 0.16
RPS6AP0CX37 PET122YER153C 765 nt16.02■□□□□ 0.16
RPS6AP0CX37 PUT4YOR348C 1884 nt15.79■□□□□ 0.12
RPS6AP0CX37 SHR5YOL110W 714 nt15.77■□□□□ 0.12
RPS6AP0CX37 SCR1SCR1 522 nt15.66■□□□□ 0.1
RPS6AP0CX37 ATS1YAL020C 1002 nt15.64■□□□□ 0.09
RPS6AP0CX37 URN1YPR152C 1398 nt15.53■□□□□ 0.08
RPS6AP0CX37 RRN5YLR141W 1092 nt15.52■□□□□ 0.08
RPS6AP0CX37 DEP1YAL013W 1218 nt15.48■□□□□ 0.07
RPS6AP0CX37 YDJ1YNL064C 1230 nt15.47■□□□□ 0.07
RPS6AP0CX37 ARE1YCR048W 1833 nt15.43■□□□□ 0.06
RPS6AP0CX37 SSA3YBL075C 1950 nt15.4■□□□□ 0.06
RPS6AP0CX37 SAH1YER043C 1350 nt15.36■□□□□ 0.05
RPS6AP0CX37 OPI9YLR338W 858 nt15.35■□□□□ 0.05
RPS6AP0CX37 POA1YBR022W 534 nt15.25■□□□□ 0.03
RPS6AP0CX37 YER088W-BYER088W-B 147 nt15.22■□□□□ 0.03
RPS6AP0CX37 GAR1YHR089C 618 nt15.22■□□□□ 0.03
RPS6AP0CX37 YHR049C-AYHR049C-A 297 nt15.18■□□□□ 0.02
RPS6AP0CX37 RPN10YHR200W 807 nt15.13■□□□□ 0.01
RPS6AP0CX37 YNL208WYNL208W 600 nt15.13■□□□□ 0.01
RPS6AP0CX37 RSB1YOR049C 1065 nt15.08■□□□□ 0
RPS6AP0CX37 BSC6YOL137W 1494 nt14.97□□□□□ -0.01
RPS6AP0CX37 PUN1YLR414C 792 nt14.86□□□□□ -0.03
RPS6AP0CX37 BUD23YCR047C 828 nt14.79□□□□□ -0.04
RPS6AP0CX37 PTC2YER089C 1395 nt14.79□□□□□ -0.04
RPS6AP0CX37 YJR018WYJR018W 363 nt14.78□□□□□ -0.04
RPS6AP0CX37 TIR1YER011W 765 nt14.71□□□□□ -0.05
RPS6AP0CX37 Q0182Q0182 405 nt14.68□□□□□ -0.06
RPS6AP0CX37 SSA1YAL005C 1929 nt14.65□□□□□ -0.06
RPS6AP0CX37 YJR120WYJR120W 351 nt14.61□□□□□ -0.07
RPS6AP0CX37 NAB2YGL122C 1578 nt14.59□□□□□ -0.07
RPS6AP0CX37 SPT5YML010W 3192 nt14.59□□□□□ -0.07
RPS6AP0CX37 PST2YDR032C 597 nt14.56□□□□□ -0.08
RPS6AP0CX37 MOT3YMR070W 1473 nt14.5□□□□□ -0.09
RPS6AP0CX37 SRB2YHR041C 633 nt14.45□□□□□ -0.1
RPS6AP0CX37 FIS1YIL065C 468 nt14.43□□□□□ -0.1
RPS6AP0CX37 DAL1YIR027C 1383 nt14.35□□□□□ -0.11
RPS6AP0CX37 RPP2BYDR382W 333 nt14.34□□□□□ -0.11
RPS6AP0CX37 FPR4YLR449W 1179 nt14.33□□□□□ -0.12
RPS6AP0CX37 PHO4YFR034C 939 nt14.25□□□□□ -0.13
RPS6AP0CX37 INM2YDR287W 879 nt14.24□□□□□ -0.13
RPS6AP0CX37 YBL100CYBL100C 315 nt14.1□□□□□ -0.15
RPS6AP0CX37 SSA4YER103W 1929 nt14.09□□□□□ -0.15
RPS6AP0CX37 YPS1YLR120C 1710 nt14.07□□□□□ -0.16
RPS6AP0CX37 MEP2YNL142W 1500 nt14.06□□□□□ -0.16
RPS6AP0CX37 WWM1YFL010C 636 nt14.06□□□□□ -0.16
RPS6AP0CX37 BDH2YAL061W 1254 nt14.06□□□□□ -0.16
RPS6AP0CX37 SHU1YHL006C 453 nt14.05□□□□□ -0.16
RPS6AP0CX37 FUN26YAL022C 1554 nt13.95□□□□□ -0.18
RPS6AP0CX37 YAL037C-BYAL037C-B 975 nt13.94□□□□□ -0.18
RPS6AP0CX37 YDR095CYDR095C 411 nt13.93□□□□□ -0.18
RPS6AP0CX37 DCW1YKL046C 1350 nt13.91□□□□□ -0.18
RPS6AP0CX37 YHR165W-AYHR165W-A 312 nt13.9□□□□□ -0.18
RPS6AP0CX37 TRM9YML014W 840 nt13.83□□□□□ -0.2
RPS6AP0CX37 HOM6YJR139C 1080 nt13.81□□□□□ -0.2
RPS6AP0CX37 LSM3YLR438C-A 270 nt13.8□□□□□ -0.2
RPS6AP0CX37 YGR021WYGR021W 873 nt13.78□□□□□ -0.2
RPS6AP0CX37 YKL097CYKL097C 411 nt13.77□□□□□ -0.21
RPS6AP0CX37 YFL021C-AYFL021C-A 855 nt13.75□□□□□ -0.21
RPS6AP0CX37 MNP1YGL068W 585 nt13.74□□□□□ -0.21
RPS6AP0CX37 ALF1YNL148C 765 nt13.74□□□□□ -0.21
RPS6AP0CX37 CCT6YDR188W 1641 nt13.74□□□□□ -0.21
RPS6AP0CX37 PTP1YDL230W 1008 nt13.72□□□□□ -0.21
RPS6AP0CX37 CAC2YML102W 1407 nt13.66□□□□□ -0.22
RPS6AP0CX37 EMI2YDR516C 1503 nt13.66□□□□□ -0.22
RPS6AP0CX37 RPP2AYOL039W 321 nt13.65□□□□□ -0.22
RPS6AP0CX37 BDF1YLR399C 2061 nt13.62□□□□□ -0.23
RPS6AP0CX37 SIS1YNL007C 1059 nt13.61□□□□□ -0.23
RPS6AP0CX37 RKM5YLR137W 1104 nt13.59□□□□□ -0.23
RPS6AP0CX37 SUF2tP(AGG)C 72 nt13.56□□□□□ -0.24
RPS6AP0CX37 SUF10tP(AGG)N 72 nt13.56□□□□□ -0.24
RPS6AP0CX37 YDL221WYDL221W 552 nt13.54□□□□□ -0.24
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms