Protein–RNA interactions for Protein: P39944

UBP5, Ubiquitin carboxyl-terminal hydrolase 5, yeastyeast

Predictions only

Length 805 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP5P39944 YML009W-BYML009W-B 477 nt22.29■■□□□ 1.16
UBP5P39944 NSR1YGR159C 1245 nt22.13■■□□□ 1.13
UBP5P39944 NOP1YDL014W 984 nt21.5■■□□□ 1.03
UBP5P39944 MDJ1YFL016C 1536 nt19.91■□□□□ 0.78
UBP5P39944 YKL036CYKL036C 393 nt19.83■□□□□ 0.77
UBP5P39944 Q0297Q0297 156 nt18.84■□□□□ 0.61
UBP5P39944 SRX1YKL086W 384 nt18.84■□□□□ 0.61
UBP5P39944 YJL027CYJL027C 417 nt18.58■□□□□ 0.56
UBP5P39944 SCS3YGL126W 1143 nt18.17■□□□□ 0.5
UBP5P39944 YCR051WYCR051W 669 nt17.93■□□□□ 0.46
UBP5P39944 DBP2YNL112W 1641 nt17.57■□□□□ 0.4
UBP5P39944 YOL085CYOL085C 342 nt17.23■□□□□ 0.35
UBP5P39944 TRN1tP(UGG)A 72 nt17.12■□□□□ 0.33
UBP5P39944 SUF9tP(UGG)F 72 nt17.12■□□□□ 0.33
UBP5P39944 SUF8tP(UGG)H 72 nt17.12■□□□□ 0.33
UBP5P39944 tP(UGG)LtP(UGG)L 72 nt17.12■□□□□ 0.33
UBP5P39944 SUF7tP(UGG)M 72 nt17.12■□□□□ 0.33
UBP5P39944 tP(UGG)N1tP(UGG)N1 72 nt17.12■□□□□ 0.33
UBP5P39944 tP(UGG)N2tP(UGG)N2 72 nt17.12■□□□□ 0.33
UBP5P39944 tP(UGG)O1tP(UGG)O1 72 nt17.12■□□□□ 0.33
UBP5P39944 SUF11tP(UGG)O2 72 nt17.12■□□□□ 0.33
UBP5P39944 PKP1YIL042C 1185 nt17.07■□□□□ 0.32
UBP5P39944 CCC1YLR220W 969 nt17.03■□□□□ 0.32
UBP5P39944 RPP1BYDL130W 321 nt16.93■□□□□ 0.3
UBP5P39944 YBR190WYBR190W 312 nt16.85■□□□□ 0.29
UBP5P39944 RTC3YHR087W 336 nt16.54■□□□□ 0.24
UBP5P39944 SCJ1YMR214W 1134 nt16.42■□□□□ 0.22
UBP5P39944 ATS1YAL020C 1002 nt16.34■□□□□ 0.21
UBP5P39944 RVS167YDR388W 1449 nt16.32■□□□□ 0.2
UBP5P39944 PET122YER153C 765 nt16.26■□□□□ 0.19
UBP5P39944 tP(UGG)O3tP(UGG)O3 72 nt16.18■□□□□ 0.18
UBP5P39944 SCR1SCR1 522 nt15.92■□□□□ 0.14
UBP5P39944 SHR5YOL110W 714 nt15.78■□□□□ 0.12
UBP5P39944 RRN5YLR141W 1092 nt15.77■□□□□ 0.12
UBP5P39944 YDJ1YNL064C 1230 nt15.58■□□□□ 0.08
UBP5P39944 DEP1YAL013W 1218 nt15.51■□□□□ 0.07
UBP5P39944 PUT4YOR348C 1884 nt15.46■□□□□ 0.07
UBP5P39944 YER088W-BYER088W-B 147 nt15.46■□□□□ 0.07
UBP5P39944 URN1YPR152C 1398 nt15.46■□□□□ 0.07
UBP5P39944 RSB1YOR049C 1065 nt15.4■□□□□ 0.06
UBP5P39944 GAR1YHR089C 618 nt15.36■□□□□ 0.05
UBP5P39944 SAH1YER043C 1350 nt15.24■□□□□ 0.03
UBP5P39944 OPI9YLR338W 858 nt15.21■□□□□ 0.03
UBP5P39944 ARE1YCR048W 1833 nt15.17■□□□□ 0.02
UBP5P39944 YNL208WYNL208W 600 nt15.11■□□□□ 0.01
UBP5P39944 PST2YDR032C 597 nt15.09■□□□□ 0.01
UBP5P39944 RPN10YHR200W 807 nt15.07■□□□□ 0
UBP5P39944 POA1YBR022W 534 nt15□□□□□ -0.01
UBP5P39944 YHR049C-AYHR049C-A 297 nt14.96□□□□□ -0.01
UBP5P39944 TIR1YER011W 765 nt14.82□□□□□ -0.04
UBP5P39944 SSA1YAL005C 1929 nt14.72□□□□□ -0.05
UBP5P39944 YJR018WYJR018W 363 nt14.71□□□□□ -0.05
UBP5P39944 PUN1YLR414C 792 nt14.71□□□□□ -0.05
UBP5P39944 BSC6YOL137W 1494 nt14.67□□□□□ -0.06
UBP5P39944 PTC2YER089C 1395 nt14.65□□□□□ -0.06
UBP5P39944 BUD23YCR047C 828 nt14.62□□□□□ -0.07
UBP5P39944 YKL097CYKL097C 411 nt14.62□□□□□ -0.07
UBP5P39944 SSA3YBL075C 1950 nt14.61□□□□□ -0.07
UBP5P39944 SRB2YHR041C 633 nt14.6□□□□□ -0.07
UBP5P39944 YJR120WYJR120W 351 nt14.59□□□□□ -0.07
UBP5P39944 SHU1YHL006C 453 nt14.43□□□□□ -0.1
UBP5P39944 NAB2YGL122C 1578 nt14.4□□□□□ -0.1
UBP5P39944 RPP2BYDR382W 333 nt14.31□□□□□ -0.12
UBP5P39944 YAL037C-BYAL037C-B 975 nt14.3□□□□□ -0.12
UBP5P39944 FIS1YIL065C 468 nt14.27□□□□□ -0.13
UBP5P39944 FPR4YLR449W 1179 nt14.25□□□□□ -0.13
UBP5P39944 WWM1YFL010C 636 nt14.21□□□□□ -0.13
UBP5P39944 DAL1YIR027C 1383 nt14.21□□□□□ -0.14
UBP5P39944 INM2YDR287W 879 nt14.13□□□□□ -0.15
UBP5P39944 PHO4YFR034C 939 nt14.11□□□□□ -0.15
UBP5P39944 BDH2YAL061W 1254 nt14.07□□□□□ -0.16
UBP5P39944 SPT5YML010W 3192 nt14.06□□□□□ -0.16
UBP5P39944 YBL100CYBL100C 315 nt14.04□□□□□ -0.16
UBP5P39944 MNP1YGL068W 585 nt14□□□□□ -0.17
UBP5P39944 YOR139CYOR139C 393 nt14□□□□□ -0.17
UBP5P39944 HOM6YJR139C 1080 nt13.99□□□□□ -0.17
UBP5P39944 YGR021WYGR021W 873 nt13.93□□□□□ -0.18
UBP5P39944 FUN26YAL022C 1554 nt13.9□□□□□ -0.18
UBP5P39944 YPS1YLR120C 1710 nt13.87□□□□□ -0.19
UBP5P39944 YFL021C-AYFL021C-A 855 nt13.85□□□□□ -0.19
UBP5P39944 NPL3YDR432W 1245 nt13.82□□□□□ -0.2
UBP5P39944 LSM3YLR438C-A 270 nt13.82□□□□□ -0.2
UBP5P39944 TRM9YML014W 840 nt13.8□□□□□ -0.2
UBP5P39944 RKM5YLR137W 1104 nt13.78□□□□□ -0.2
UBP5P39944 YDR095CYDR095C 411 nt13.75□□□□□ -0.21
UBP5P39944 MEP2YNL142W 1500 nt13.74□□□□□ -0.21
UBP5P39944 YHR165W-AYHR165W-A 312 nt13.71□□□□□ -0.21
UBP5P39944 CCT6YDR188W 1641 nt13.68□□□□□ -0.22
UBP5P39944 ALF1YNL148C 765 nt13.66□□□□□ -0.22
UBP5P39944 DCW1YKL046C 1350 nt13.64□□□□□ -0.23
UBP5P39944 YOL037CYOL037C 354 nt13.58□□□□□ -0.24
UBP5P39944 SSA4YER103W 1929 nt13.55□□□□□ -0.24
UBP5P39944 PTP1YDL230W 1008 nt13.54□□□□□ -0.24
UBP5P39944 SUF2tP(AGG)C 72 nt13.49□□□□□ -0.25
UBP5P39944 SUF10tP(AGG)N 72 nt13.49□□□□□ -0.25
UBP5P39944 SIS1YNL007C 1059 nt13.49□□□□□ -0.25
UBP5P39944 RPP2AYOL039W 321 nt13.48□□□□□ -0.25
UBP5P39944 CAC2YML102W 1407 nt13.47□□□□□ -0.25
UBP5P39944 tM(CAU)CtM(CAU)C 72 nt13.45□□□□□ -0.26
UBP5P39944 IMT4tM(CAU)E 72 nt13.45□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms