Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeastyeast

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKP2P42843 YML009W-BYML009W-B 477 nt22.78■■□□□ 1.24
SKP2P42843 NOP1YDL014W 984 nt22.35■■□□□ 1.17
SKP2P42843 NSR1YGR159C 1245 nt22.22■■□□□ 1.15
SKP2P42843 YKL036CYKL036C 393 nt21.09■□□□□ 0.97
SKP2P42843 YJL027CYJL027C 417 nt19.78■□□□□ 0.76
SKP2P42843 Q0297Q0297 156 nt19.74■□□□□ 0.75
SKP2P42843 SRX1YKL086W 384 nt19.53■□□□□ 0.72
SKP2P42843 SCS3YGL126W 1143 nt19.45■□□□□ 0.7
SKP2P42843 MDJ1YFL016C 1536 nt19.25■□□□□ 0.67
SKP2P42843 YCR051WYCR051W 669 nt18.57■□□□□ 0.56
SKP2P42843 YOL085CYOL085C 342 nt18.27■□□□□ 0.52
SKP2P42843 PKP1YIL042C 1185 nt17.93■□□□□ 0.46
SKP2P42843 SCJ1YMR214W 1134 nt17.84■□□□□ 0.45
SKP2P42843 RPP1BYDL130W 321 nt17.71■□□□□ 0.43
SKP2P42843 ATS1YAL020C 1002 nt17.54■□□□□ 0.4
SKP2P42843 TRN1tP(UGG)A 72 nt17.37■□□□□ 0.37
SKP2P42843 SUF9tP(UGG)F 72 nt17.37■□□□□ 0.37
SKP2P42843 SUF8tP(UGG)H 72 nt17.37■□□□□ 0.37
SKP2P42843 tP(UGG)LtP(UGG)L 72 nt17.37■□□□□ 0.37
SKP2P42843 SUF7tP(UGG)M 72 nt17.37■□□□□ 0.37
SKP2P42843 tP(UGG)N1tP(UGG)N1 72 nt17.37■□□□□ 0.37
SKP2P42843 tP(UGG)N2tP(UGG)N2 72 nt17.37■□□□□ 0.37
SKP2P42843 tP(UGG)O1tP(UGG)O1 72 nt17.37■□□□□ 0.37
SKP2P42843 SUF11tP(UGG)O2 72 nt17.37■□□□□ 0.37
SKP2P42843 DBP2YNL112W 1641 nt17.25■□□□□ 0.35
SKP2P42843 CCC1YLR220W 969 nt17.21■□□□□ 0.35
SKP2P42843 PET122YER153C 765 nt16.86■□□□□ 0.29
SKP2P42843 SCR1SCR1 522 nt16.8■□□□□ 0.28
SKP2P42843 tP(UGG)O3tP(UGG)O3 72 nt16.6■□□□□ 0.25
SKP2P42843 RRN5YLR141W 1092 nt16.44■□□□□ 0.22
SKP2P42843 RVS167YDR388W 1449 nt16.31■□□□□ 0.2
SKP2P42843 YBR190WYBR190W 312 nt16.29■□□□□ 0.2
SKP2P42843 RTC3YHR087W 336 nt16.23■□□□□ 0.19
SKP2P42843 RSB1YOR049C 1065 nt16.23■□□□□ 0.19
SKP2P42843 PST2YDR032C 597 nt16.17■□□□□ 0.18
SKP2P42843 YER088W-BYER088W-B 147 nt16.13■□□□□ 0.17
SKP2P42843 YDJ1YNL064C 1230 nt16.06■□□□□ 0.16
SKP2P42843 SHR5YOL110W 714 nt15.87■□□□□ 0.13
SKP2P42843 YKL097CYKL097C 411 nt15.77■□□□□ 0.12
SKP2P42843 GAR1YHR089C 618 nt15.63■□□□□ 0.09
SKP2P42843 SHU1YHL006C 453 nt15.39■□□□□ 0.05
SKP2P42843 DEP1YAL013W 1218 nt15.27■□□□□ 0.04
SKP2P42843 URN1YPR152C 1398 nt15.12■□□□□ 0.01
SKP2P42843 TIR1YER011W 765 nt15.07■□□□□ 0
SKP2P42843 YNL208WYNL208W 600 nt15.07■□□□□ 0
SKP2P42843 YOR139CYOR139C 393 nt15.07■□□□□ 0
SKP2P42843 YAL037C-BYAL037C-B 975 nt15.01□□□□□ -0.01
SKP2P42843 RPN10YHR200W 807 nt15□□□□□ -0.01
SKP2P42843 NPL3YDR432W 1245 nt14.81□□□□□ -0.04
SKP2P42843 OPI9YLR338W 858 nt14.8□□□□□ -0.04
SKP2P42843 SSA1YAL005C 1929 nt14.8□□□□□ -0.04
SKP2P42843 SRB2YHR041C 633 nt14.66□□□□□ -0.06
SKP2P42843 SAH1YER043C 1350 nt14.59□□□□□ -0.07
SKP2P42843 YGR021WYGR021W 873 nt14.55□□□□□ -0.08
SKP2P42843 MNP1YGL068W 585 nt14.54□□□□□ -0.08
SKP2P42843 HOM6YJR139C 1080 nt14.54□□□□□ -0.08
SKP2P42843 WWM1YFL010C 636 nt14.5□□□□□ -0.09
SKP2P42843 YOL037CYOL037C 354 nt14.48□□□□□ -0.09
SKP2P42843 YJR018WYJR018W 363 nt14.46□□□□□ -0.09
SKP2P42843 tM(CAU)CtM(CAU)C 72 nt14.45□□□□□ -0.1
SKP2P42843 IMT4tM(CAU)E 72 nt14.45□□□□□ -0.1
SKP2P42843 IMT3tM(CAU)J3 72 nt14.45□□□□□ -0.1
SKP2P42843 IMT1tM(CAU)O1 72 nt14.45□□□□□ -0.1
SKP2P42843 IMT2tM(CAU)P 72 nt14.45□□□□□ -0.1
SKP2P42843 PUT4YOR348C 1884 nt14.41□□□□□ -0.1
SKP2P42843 PUN1YLR414C 792 nt14.37□□□□□ -0.11
SKP2P42843 YJR120WYJR120W 351 nt14.35□□□□□ -0.11
SKP2P42843 RKM5YLR137W 1104 nt14.33□□□□□ -0.12
SKP2P42843 ARE1YCR048W 1833 nt14.3□□□□□ -0.12
SKP2P42843 RPP2BYDR382W 333 nt14.29□□□□□ -0.12
SKP2P42843 YFL021C-AYFL021C-A 855 nt14.24□□□□□ -0.13
SKP2P42843 PUS2YGL063W 1113 nt14.16□□□□□ -0.14
SKP2P42843 SSA3YBL075C 1950 nt14.16□□□□□ -0.14
SKP2P42843 YLR281CYLR281C 468 nt14.14□□□□□ -0.15
SKP2P42843 PTC2YER089C 1395 nt14.12□□□□□ -0.15
SKP2P42843 YHR049C-AYHR049C-A 297 nt14.11□□□□□ -0.15
SKP2P42843 BDH2YAL061W 1254 nt14.1□□□□□ -0.15
SKP2P42843 MOT3YMR070W 1473 nt14.07□□□□□ -0.16
SKP2P42843 LSM3YLR438C-A 270 nt14.02□□□□□ -0.17
SKP2P42843 WHI5YOR083W 888 nt14.01□□□□□ -0.17
SKP2P42843 POA1YBR022W 534 nt14.01□□□□□ -0.17
SKP2P42843 INM2YDR287W 879 nt13.88□□□□□ -0.19
SKP2P42843 BSC6YOL137W 1494 nt13.87□□□□□ -0.19
SKP2P42843 NAB2YGL122C 1578 nt13.85□□□□□ -0.19
SKP2P42843 BUD23YCR047C 828 nt13.83□□□□□ -0.2
SKP2P42843 YBL100CYBL100C 315 nt13.82□□□□□ -0.2
SKP2P42843 FMP45YDL222C 930 nt13.8□□□□□ -0.2
SKP2P42843 YPR011CYPR011C 981 nt13.8□□□□□ -0.2
SKP2P42843 DAL1YIR027C 1383 nt13.78□□□□□ -0.2
SKP2P42843 FPR4YLR449W 1179 nt13.76□□□□□ -0.21
SKP2P42843 DSK2YMR276W 1122 nt13.76□□□□□ -0.21
SKP2P42843 TRM9YML014W 840 nt13.75□□□□□ -0.21
SKP2P42843 YLR236CYLR236C 324 nt13.72□□□□□ -0.21
SKP2P42843 FIS1YIL065C 468 nt13.71□□□□□ -0.21
SKP2P42843 MRPL8YJL063C 717 nt13.7□□□□□ -0.22
SKP2P42843 YCH1YGR203W 447 nt13.69□□□□□ -0.22
SKP2P42843 FUN26YAL022C 1554 nt13.69□□□□□ -0.22
SKP2P42843 IMP2'YIL154C 1041 nt13.68□□□□□ -0.22
SKP2P42843 PHO4YFR034C 939 nt13.64□□□□□ -0.23
SKP2P42843 YLR154C-GYLR154C-G 150 nt13.64□□□□□ -0.23
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms