RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	VPS1	P21576	704 aa	Known RBP	4.29	□□□□□ -1.72
ATG2	YNL242W	MIP6	P38760	659 aa	Known RBP	4.29	□□□□□ -1.72
ATG2	YNL242W	EFM4	P40516	257 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	SET2	P46995	733 aa	Known RBP	4.29	□□□□□ -1.72
ATG2	YNL242W	YLR407W	Q06070	228 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	GNT1	Q12096	491 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	URA1	P28272	314 aa	Predicted RBP	4.29	□□□□□ -1.72
ATG2	YNL242W	YKU70	P32807	602 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	BDF1	P35817	686 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.29	□□□□□ -1.72	not detected
ATG2	YNL242W	RFT1	P38206	574 aa	Predicted RBP	4.29	□□□□□ -1.72
ATG2	YNL242W	UBX4	P54730	416 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	FCP1	Q03254	732 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	MTC5	Q03897	1148 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	PLP1	Q04004	230 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	HFD1	Q04458	532 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	RSA3	Q05942	220 aa	Known RBP	4.29	□□□□□ -1.72
ATG2	YNL242W	NOP6	Q07623	225 aa	Known RBP	4.29	□□□□□ -1.72
ATG2	YNL242W	DCS2	Q12123	353 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	COB	P00163	385 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	RPS9B	P05755	195 aa	Known RBP	4.29	□□□□□ -1.72
ATG2	YNL242W	CTT1	P06115	562 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	SUI3	P09064	285 aa	Known RBP	4.29	□□□□□ -1.72
ATG2	YNL242W	KES1	P35844	434 aa	Known RBP	4.29	□□□□□ -1.72
ATG2	YNL242W	PIH1	P38768	344 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	GVP36	P40531	326 aa	Known RBP	4.29	□□□□□ -1.72
ATG2	YNL242W	SHE4	P51534	789 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	HFM1	P51979	1187 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	TPO2	P53283	614 aa		4.29	□□□□□ -1.72
ATG2	YNL242W	TRM44	Q02648	567 aa	Known RBP	4.29	□□□□□ -1.72
ATG2	YNL242W	PRT1	P06103	763 aa	Known RBP	4.28	□□□□□ -1.72
ATG2	YNL242W	CDC6	P09119	513 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	KEX2	P13134	814 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	SMC1	P32908	1225 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	NIP100	P33420	868 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	TIF3	P34167	436 aa	Known RBP	4.28	□□□□□ -1.72
ATG2	YNL242W	HIF1	Q12373	385 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	RPL24A	P04449	155 aa	Known RBP	4.28	□□□□□ -1.72
ATG2	YNL242W	THS1	P04801	734 aa	Known RBP	4.28	□□□□□ -1.72
ATG2	YNL242W	SBP1	P10080	294 aa	Known RBP	4.28	□□□□□ -1.72
ATG2	YNL242W	OM45	P16547	393 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	YFL034W	P43564	1073 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	RPC17	P47076	161 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	VTC3	Q02725	835 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	YOL075C	Q08234	1294 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	DBP10	Q12389	995 aa	Known RBP	4.28	□□□□□ -1.72
ATG2	YNL242W	TUF1	P02992	437 aa	Known RBP	4.28	□□□□□ -1.72
ATG2	YNL242W	GAL2	P13181	574 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	KGD2	P19262	463 aa	Predicted RBP	4.28	□□□□□ -1.72
ATG2	YNL242W	CKI1	P20485	582 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	HEM3	P28789	327 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	LHS1	P36016	881 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	UTP9	P38882	575 aa	Known RBP	4.28	□□□□□ -1.72
ATG2	YNL242W	NGL3	Q03210	505 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	VTI1	Q04338	217 aa		4.28	□□□□□ -1.72
ATG2	YNL242W	RIB2	Q12362	591 aa	Known RBP	4.28	□□□□□ -1.72
ATG2	YNL242W	EFB1	P32471	206 aa	Known RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	ERC1	P38767	581 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	NUP60	P39705	539 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	GIS4	Q04233	774 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	YMR111C	Q04461	462 aa	Predicted RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	PIG1	Q06216	648 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	MPC54	Q08550	464 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	PSF3	Q12146	194 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	GET3	Q12154	354 aa	Known RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	CDC10	P25342	322 aa	Known RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	PEA2	P40091	420 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	PTA1	Q01329	785 aa	Predicted RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	CTF4	Q01454	927 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	YLR177W	Q06251	628 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	UTP4	Q06679	776 aa	Known RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	MET7	Q08645	548 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	IME1	P21190	360 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	MVD1	P32377	396 aa	Known RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	RER2	P35196	286 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	MET1	P36150	593 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	PXA1	P41909	870 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	CUS1	Q02554	436 aa	Predicted RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	STE20	Q03497	939 aa	Known RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	PNP1	Q05788	311 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	GGA1	Q06336	557 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	CIR2	Q08822	631 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	VMA2	P16140	517 aa	Known RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	SEC18	P18759	758 aa	Known RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	SWI4	P25302	1093 aa	Known RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	PYC2	P32327	1180 aa	Known RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	YBP1	P38315	674 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	ETP1	P38748	585 aa	Known RBP	4.27	□□□□□ -1.73
ATG2	YNL242W	VHR2	P40041	505 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	FET4	P40988	552 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	SGM1	P47166	707 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	SEY1	Q99287	776 aa		4.27	□□□□□ -1.73
ATG2	YNL242W	SEM1	O94742	89 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	PIM1	P36775	1133 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	VPS8	P39702	1274 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	VFA1	P40080	203 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	URB2	P47108	1174 aa		4.26	□□□□□ -1.73
ATG2	YNL242W	NCS2	P53923	493 aa	Predicted RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	LGE1	Q02796	332 aa	Known RBP	4.26	□□□□□ -1.73
ATG2	YNL242W	SSF2	Q12153	453 aa	Predicted RBP	4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms