Protein–RNA interactions for Protein: P54730

UBX4, UBX domain-containing protein 4, yeastyeast

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBX4P54730 NSR1YGR159C 1245 nt20.4■□□□□ 0.86
UBX4P54730 YML009W-BYML009W-B 477 nt20.1■□□□□ 0.81
UBX4P54730 NOP1YDL014W 984 nt19.35■□□□□ 0.69
UBX4P54730 MDJ1YFL016C 1536 nt18.49■□□□□ 0.55
UBX4P54730 YKL036CYKL036C 393 nt17.52■□□□□ 0.4
UBX4P54730 SRX1YKL086W 384 nt16.99■□□□□ 0.31
UBX4P54730 YJL027CYJL027C 417 nt16.96■□□□□ 0.31
UBX4P54730 Q0297Q0297 156 nt16.92■□□□□ 0.3
UBX4P54730 DBP2YNL112W 1641 nt16.31■□□□□ 0.2
UBX4P54730 YCR051WYCR051W 669 nt16■□□□□ 0.15
UBX4P54730 YBR190WYBR190W 312 nt15.88■□□□□ 0.13
UBX4P54730 SCS3YGL126W 1143 nt15.78■□□□□ 0.12
UBX4P54730 TRN1tP(UGG)A 72 nt15.63■□□□□ 0.09
UBX4P54730 SUF9tP(UGG)F 72 nt15.63■□□□□ 0.09
UBX4P54730 SUF8tP(UGG)H 72 nt15.63■□□□□ 0.09
UBX4P54730 tP(UGG)LtP(UGG)L 72 nt15.63■□□□□ 0.09
UBX4P54730 SUF7tP(UGG)M 72 nt15.63■□□□□ 0.09
UBX4P54730 tP(UGG)N1tP(UGG)N1 72 nt15.63■□□□□ 0.09
UBX4P54730 tP(UGG)N2tP(UGG)N2 72 nt15.63■□□□□ 0.09
UBX4P54730 tP(UGG)O1tP(UGG)O1 72 nt15.63■□□□□ 0.09
UBX4P54730 SUF11tP(UGG)O2 72 nt15.63■□□□□ 0.09
UBX4P54730 RTC3YHR087W 336 nt15.4■□□□□ 0.06
UBX4P54730 CCC1YLR220W 969 nt15.37■□□□□ 0.05
UBX4P54730 YOL085CYOL085C 342 nt15.25■□□□□ 0.03
UBX4P54730 RPP1BYDL130W 321 nt15.15■□□□□ 0.02
UBX4P54730 SCJ1YMR214W 1134 nt15.04■□□□□ -0
UBX4P54730 RVS167YDR388W 1449 nt15.03■□□□□ -0
UBX4P54730 PKP1YIL042C 1185 nt15.02■□□□□ -0
UBX4P54730 SSA3YBL075C 1950 nt14.85□□□□□ -0.03
UBX4P54730 PUT4YOR348C 1884 nt14.82□□□□□ -0.04
UBX4P54730 tP(UGG)O3tP(UGG)O3 72 nt14.63□□□□□ -0.07
UBX4P54730 PET122YER153C 765 nt14.54□□□□□ -0.08
UBX4P54730 SHR5YOL110W 714 nt14.5□□□□□ -0.09
UBX4P54730 ARE1YCR048W 1833 nt14.42□□□□□ -0.1
UBX4P54730 URN1YPR152C 1398 nt14.34□□□□□ -0.11
UBX4P54730 Q0182Q0182 405 nt14.29□□□□□ -0.12
UBX4P54730 SAH1YER043C 1350 nt14.26□□□□□ -0.13
UBX4P54730 OPI9YLR338W 858 nt14.25□□□□□ -0.13
UBX4P54730 POA1YBR022W 534 nt14.24□□□□□ -0.13
UBX4P54730 DEP1YAL013W 1218 nt14.19□□□□□ -0.14
UBX4P54730 SCR1SCR1 522 nt14.19□□□□□ -0.14
UBX4P54730 YDJ1YNL064C 1230 nt14.17□□□□□ -0.14
UBX4P54730 YHR049C-AYHR049C-A 297 nt14.14□□□□□ -0.15
UBX4P54730 RRN5YLR141W 1092 nt14.07□□□□□ -0.16
UBX4P54730 BSC6YOL137W 1494 nt14.03□□□□□ -0.16
UBX4P54730 ATS1YAL020C 1002 nt14□□□□□ -0.17
UBX4P54730 RPN10YHR200W 807 nt13.94□□□□□ -0.18
UBX4P54730 YNL208WYNL208W 600 nt13.93□□□□□ -0.18
UBX4P54730 SPT5YML010W 3192 nt13.91□□□□□ -0.18
UBX4P54730 GAR1YHR089C 618 nt13.86□□□□□ -0.19
UBX4P54730 YER088W-BYER088W-B 147 nt13.8□□□□□ -0.2
UBX4P54730 PUN1YLR414C 792 nt13.78□□□□□ -0.2
UBX4P54730 BUD23YCR047C 828 nt13.72□□□□□ -0.21
UBX4P54730 PTC2YER089C 1395 nt13.71□□□□□ -0.22
UBX4P54730 YJR018WYJR018W 363 nt13.65□□□□□ -0.22
UBX4P54730 MOT3YMR070W 1473 nt13.62□□□□□ -0.23
UBX4P54730 RSB1YOR049C 1065 nt13.59□□□□□ -0.23
UBX4P54730 NAB2YGL122C 1578 nt13.58□□□□□ -0.23
UBX4P54730 YJR120WYJR120W 351 nt13.51□□□□□ -0.25
UBX4P54730 TIR1YER011W 765 nt13.44□□□□□ -0.26
UBX4P54730 SSA4YER103W 1929 nt13.44□□□□□ -0.26
UBX4P54730 SSA1YAL005C 1929 nt13.43□□□□□ -0.26
UBX4P54730 FIS1YIL065C 468 nt13.42□□□□□ -0.26
UBX4P54730 DAL1YIR027C 1383 nt13.32□□□□□ -0.28
UBX4P54730 MEP2YNL142W 1500 nt13.23□□□□□ -0.29
UBX4P54730 PHO4YFR034C 939 nt13.21□□□□□ -0.29
UBX4P54730 SRB2YHR041C 633 nt13.21□□□□□ -0.29
UBX4P54730 INM2YDR287W 879 nt13.2□□□□□ -0.3
UBX4P54730 FPR4YLR449W 1179 nt13.19□□□□□ -0.3
UBX4P54730 RPP2BYDR382W 333 nt13.18□□□□□ -0.3
UBX4P54730 YPS1YLR120C 1710 nt13.14□□□□□ -0.31
UBX4P54730 PST2YDR032C 597 nt13.09□□□□□ -0.31
UBX4P54730 BDF1YLR399C 2061 nt13.05□□□□□ -0.32
UBX4P54730 DCW1YKL046C 1350 nt13.04□□□□□ -0.32
UBX4P54730 YBL100CYBL100C 315 nt13.01□□□□□ -0.33
UBX4P54730 YDR095CYDR095C 411 nt12.99□□□□□ -0.33
UBX4P54730 BDH2YAL061W 1254 nt12.95□□□□□ -0.34
UBX4P54730 YHR165W-AYHR165W-A 312 nt12.92□□□□□ -0.34
UBX4P54730 FUN26YAL022C 1554 nt12.87□□□□□ -0.35
UBX4P54730 TAT1YBR069C 1860 nt12.85□□□□□ -0.35
UBX4P54730 PTP1YDL230W 1008 nt12.82□□□□□ -0.36
UBX4P54730 EMI2YDR516C 1503 nt12.82□□□□□ -0.36
UBX4P54730 WWM1YFL010C 636 nt12.8□□□□□ -0.36
UBX4P54730 YBR220CYBR220C 1683 nt12.77□□□□□ -0.36
UBX4P54730 CAC2YML102W 1407 nt12.77□□□□□ -0.37
UBX4P54730 TRM9YML014W 840 nt12.72□□□□□ -0.37
UBX4P54730 LSM3YLR438C-A 270 nt12.71□□□□□ -0.37
UBX4P54730 RPP2AYOL039W 321 nt12.71□□□□□ -0.37
UBX4P54730 YDL221WYDL221W 552 nt12.7□□□□□ -0.38
UBX4P54730 CCT6YDR188W 1641 nt12.69□□□□□ -0.38
UBX4P54730 ALF1YNL148C 765 nt12.67□□□□□ -0.38
UBX4P54730 YMR090WYMR090W 684 nt12.65□□□□□ -0.38
UBX4P54730 SIS1YNL007C 1059 nt12.64□□□□□ -0.39
UBX4P54730 SDH1YKL148C 1923 nt12.64□□□□□ -0.39
UBX4P54730 SHU1YHL006C 453 nt12.63□□□□□ -0.39
UBX4P54730 YFL021C-AYFL021C-A 855 nt12.58□□□□□ -0.4
UBX4P54730 IRC15YPL017C 1500 nt12.57□□□□□ -0.4
UBX4P54730 HOM6YJR139C 1080 nt12.56□□□□□ -0.4
UBX4P54730 YGR021WYGR021W 873 nt12.54□□□□□ -0.4
UBX4P54730 YAL037C-BYAL037C-B 975 nt12.54□□□□□ -0.4
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms