Protein–RNA interactions for Protein: Q05942

RSA3, Ribosome assembly protein 3, yeastyeast

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSA3Q05942 NSR1YGR159C 1245 nt18.47■□□□□ 0.55
RSA3Q05942 YML009W-BYML009W-B 477 nt18.35■□□□□ 0.53
RSA3Q05942 NOP1YDL014W 984 nt17.86■□□□□ 0.45
RSA3Q05942 MDJ1YFL016C 1536 nt17.09■□□□□ 0.33
RSA3Q05942 YKL036CYKL036C 393 nt16.2■□□□□ 0.18
RSA3Q05942 SSA3YBL075C 1950 nt15.75■□□□□ 0.11
RSA3Q05942 YJL027CYJL027C 417 nt15.66■□□□□ 0.1
RSA3Q05942 SRX1YKL086W 384 nt15.52■□□□□ 0.08
RSA3Q05942 Q0297Q0297 156 nt15.47■□□□□ 0.07
RSA3Q05942 YBR190WYBR190W 312 nt14.82□□□□□ -0.04
RSA3Q05942 DBP2YNL112W 1641 nt14.71□□□□□ -0.05
RSA3Q05942 YCR051WYCR051W 669 nt14.71□□□□□ -0.05
RSA3Q05942 SCS3YGL126W 1143 nt14.54□□□□□ -0.08
RSA3Q05942 RTC3YHR087W 336 nt14.44□□□□□ -0.1
RSA3Q05942 PUT4YOR348C 1884 nt14.22□□□□□ -0.13
RSA3Q05942 TRN1tP(UGG)A 72 nt14.13□□□□□ -0.15
RSA3Q05942 SUF9tP(UGG)F 72 nt14.13□□□□□ -0.15
RSA3Q05942 SUF8tP(UGG)H 72 nt14.13□□□□□ -0.15
RSA3Q05942 tP(UGG)LtP(UGG)L 72 nt14.13□□□□□ -0.15
RSA3Q05942 SUF7tP(UGG)M 72 nt14.13□□□□□ -0.15
RSA3Q05942 tP(UGG)N1tP(UGG)N1 72 nt14.13□□□□□ -0.15
RSA3Q05942 tP(UGG)N2tP(UGG)N2 72 nt14.13□□□□□ -0.15
RSA3Q05942 tP(UGG)O1tP(UGG)O1 72 nt14.13□□□□□ -0.15
RSA3Q05942 SUF11tP(UGG)O2 72 nt14.13□□□□□ -0.15
RSA3Q05942 CCC1YLR220W 969 nt13.98□□□□□ -0.17
RSA3Q05942 YOL085CYOL085C 342 nt13.97□□□□□ -0.17
RSA3Q05942 RPP1BYDL130W 321 nt13.88□□□□□ -0.19
RSA3Q05942 RVS167YDR388W 1449 nt13.77□□□□□ -0.21
RSA3Q05942 PKP1YIL042C 1185 nt13.75□□□□□ -0.21
RSA3Q05942 SSA4YER103W 1929 nt13.72□□□□□ -0.21
RSA3Q05942 SPT5YML010W 3192 nt13.7□□□□□ -0.22
RSA3Q05942 POA1YBR022W 534 nt13.68□□□□□ -0.22
RSA3Q05942 ARE1YCR048W 1833 nt13.66□□□□□ -0.22
RSA3Q05942 BSC6YOL137W 1494 nt13.59□□□□□ -0.23
RSA3Q05942 YHR049C-AYHR049C-A 297 nt13.5□□□□□ -0.25
RSA3Q05942 SCJ1YMR214W 1134 nt13.47□□□□□ -0.25
RSA3Q05942 SAH1YER043C 1350 nt13.33□□□□□ -0.27
RSA3Q05942 BDF1YLR399C 2061 nt13.3□□□□□ -0.28
RSA3Q05942 tP(UGG)O3tP(UGG)O3 72 nt13.3□□□□□ -0.28
RSA3Q05942 PET122YER153C 765 nt13.23□□□□□ -0.29
RSA3Q05942 SCR1SCR1 522 nt13.18□□□□□ -0.3
RSA3Q05942 OPI9YLR338W 858 nt13.17□□□□□ -0.3
RSA3Q05942 PAC11YDR488C 1602 nt13.17□□□□□ -0.3
RSA3Q05942 SHR5YOL110W 714 nt13.16□□□□□ -0.3
RSA3Q05942 URN1YPR152C 1398 nt13.16□□□□□ -0.3
RSA3Q05942 Q0182Q0182 405 nt13.11□□□□□ -0.31
RSA3Q05942 TAT1YBR069C 1860 nt13.1□□□□□ -0.31
RSA3Q05942 BUD23YCR047C 828 nt13.1□□□□□ -0.31
RSA3Q05942 ATS1YAL020C 1002 nt12.96□□□□□ -0.33
RSA3Q05942 YDJ1YNL064C 1230 nt12.91□□□□□ -0.34
RSA3Q05942 MOT3YMR070W 1473 nt12.89□□□□□ -0.35
RSA3Q05942 DEP1YAL013W 1218 nt12.88□□□□□ -0.35
RSA3Q05942 MEP2YNL142W 1500 nt12.86□□□□□ -0.35
RSA3Q05942 RRN5YLR141W 1092 nt12.85□□□□□ -0.35
RSA3Q05942 NVJ2YPR091C 2313 nt12.83□□□□□ -0.36
RSA3Q05942 RPN10YHR200W 807 nt12.79□□□□□ -0.36
RSA3Q05942 PTC2YER089C 1395 nt12.79□□□□□ -0.36
RSA3Q05942 PUN1YLR414C 792 nt12.77□□□□□ -0.37
RSA3Q05942 NAB2YGL122C 1578 nt12.77□□□□□ -0.37
RSA3Q05942 YNL208WYNL208W 600 nt12.65□□□□□ -0.38
RSA3Q05942 DCW1YKL046C 1350 nt12.63□□□□□ -0.39
RSA3Q05942 GAR1YHR089C 618 nt12.62□□□□□ -0.39
RSA3Q05942 YER088W-BYER088W-B 147 nt12.58□□□□□ -0.4
RSA3Q05942 RSB1YOR049C 1065 nt12.56□□□□□ -0.4
RSA3Q05942 YBR220CYBR220C 1683 nt12.55□□□□□ -0.4
RSA3Q05942 FIS1YIL065C 468 nt12.5□□□□□ -0.41
RSA3Q05942 YJR018WYJR018W 363 nt12.49□□□□□ -0.41
RSA3Q05942 YMR090WYMR090W 684 nt12.44□□□□□ -0.42
RSA3Q05942 EMI2YDR516C 1503 nt12.43□□□□□ -0.42
RSA3Q05942 YPS1YLR120C 1710 nt12.41□□□□□ -0.42
RSA3Q05942 DAL1YIR027C 1383 nt12.41□□□□□ -0.42
RSA3Q05942 FPR4YLR449W 1179 nt12.36□□□□□ -0.43
RSA3Q05942 PCH2YBR186W 1695 nt12.35□□□□□ -0.43
RSA3Q05942 YHR165W-AYHR165W-A 312 nt12.34□□□□□ -0.43
RSA3Q05942 GUT2YIL155C 1950 nt12.32□□□□□ -0.44
RSA3Q05942 SDH1YKL148C 1923 nt12.31□□□□□ -0.44
RSA3Q05942 PHO4YFR034C 939 nt12.3□□□□□ -0.44
RSA3Q05942 YDL221WYDL221W 552 nt12.26□□□□□ -0.45
RSA3Q05942 SEC11YIR022W 504 nt12.24□□□□□ -0.45
RSA3Q05942 TIR1YER011W 765 nt12.21□□□□□ -0.45
RSA3Q05942 FPS1YLL043W 2010 nt12.2□□□□□ -0.46
RSA3Q05942 YDR095CYDR095C 411 nt12.17□□□□□ -0.46
RSA3Q05942 INM2YDR287W 879 nt12.16□□□□□ -0.46
RSA3Q05942 RPP2BYDR382W 333 nt12.1□□□□□ -0.47
RSA3Q05942 PIB2YGL023C 1908 nt12.09□□□□□ -0.47
RSA3Q05942 YJR120WYJR120W 351 nt12.09□□□□□ -0.47
RSA3Q05942 CAC2YML102W 1407 nt12.08□□□□□ -0.48
RSA3Q05942 SCC4YER147C 1875 nt12.08□□□□□ -0.48
RSA3Q05942 SSA1YAL005C 1929 nt12.03□□□□□ -0.48
RSA3Q05942 PST2YDR032C 597 nt12.02□□□□□ -0.49
RSA3Q05942 PTP1YDL230W 1008 nt11.99□□□□□ -0.49
RSA3Q05942 RTF1YGL244W 1677 nt11.95□□□□□ -0.5
RSA3Q05942 RPP2AYOL039W 321 nt11.93□□□□□ -0.5
RSA3Q05942 YSC84YHR016C 1407 nt11.93□□□□□ -0.5
RSA3Q05942 YBL100CYBL100C 315 nt11.91□□□□□ -0.5
RSA3Q05942 UME6YDR207C 2511 nt11.91□□□□□ -0.5
RSA3Q05942 IRC15YPL017C 1500 nt11.91□□□□□ -0.5
RSA3Q05942 GIS3YLR094C 1509 nt11.86□□□□□ -0.51
RSA3Q05942 BOR1YNL275W 1731 nt11.84□□□□□ -0.51
RSA3Q05942 YHL050CYHL050C 2094 nt11.82□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms