Protein–RNA interactions for Protein: P35196

RER2, Dehydrodolichyl diphosphate synthase complex subunit RER2, yeastyeast

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RER2P35196 YML009W-BYML009W-B 477 nt23.8■■□□□ 1.4
RER2P35196 NSR1YGR159C 1245 nt23.59■■□□□ 1.37
RER2P35196 NOP1YDL014W 984 nt23.11■■□□□ 1.29
RER2P35196 YKL036CYKL036C 393 nt21.38■■□□□ 1.01
RER2P35196 MDJ1YFL016C 1536 nt20.96■□□□□ 0.95
RER2P35196 Q0297Q0297 156 nt20.25■□□□□ 0.83
RER2P35196 SRX1YKL086W 384 nt20.2■□□□□ 0.82
RER2P35196 YJL027CYJL027C 417 nt19.98■□□□□ 0.79
RER2P35196 SCS3YGL126W 1143 nt19.5■□□□□ 0.71
RER2P35196 YCR051WYCR051W 669 nt19.2■□□□□ 0.66
RER2P35196 DBP2YNL112W 1641 nt18.56■□□□□ 0.56
RER2P35196 YOL085CYOL085C 342 nt18.54■□□□□ 0.56
RER2P35196 PKP1YIL042C 1185 nt18.29■□□□□ 0.52
RER2P35196 TRN1tP(UGG)A 72 nt18.25■□□□□ 0.51
RER2P35196 SUF9tP(UGG)F 72 nt18.25■□□□□ 0.51
RER2P35196 SUF8tP(UGG)H 72 nt18.25■□□□□ 0.51
RER2P35196 tP(UGG)LtP(UGG)L 72 nt18.25■□□□□ 0.51
RER2P35196 SUF7tP(UGG)M 72 nt18.25■□□□□ 0.51
RER2P35196 tP(UGG)N1tP(UGG)N1 72 nt18.25■□□□□ 0.51
RER2P35196 tP(UGG)N2tP(UGG)N2 72 nt18.25■□□□□ 0.51
RER2P35196 tP(UGG)O1tP(UGG)O1 72 nt18.25■□□□□ 0.51
RER2P35196 SUF11tP(UGG)O2 72 nt18.25■□□□□ 0.51
RER2P35196 RPP1BYDL130W 321 nt18.19■□□□□ 0.5
RER2P35196 CCC1YLR220W 969 nt18.12■□□□□ 0.49
RER2P35196 YBR190WYBR190W 312 nt17.82■□□□□ 0.44
RER2P35196 RTC3YHR087W 336 nt17.45■□□□□ 0.38
RER2P35196 ATS1YAL020C 1002 nt17.45■□□□□ 0.38
RER2P35196 RVS167YDR388W 1449 nt17.4■□□□□ 0.38
RER2P35196 PET122YER153C 765 nt17.39■□□□□ 0.37
RER2P35196 SCJ1YMR214W 1134 nt17.38■□□□□ 0.37
RER2P35196 tP(UGG)O3tP(UGG)O3 72 nt17.3■□□□□ 0.36
RER2P35196 SCR1SCR1 522 nt17.17■□□□□ 0.34
RER2P35196 RRN5YLR141W 1092 nt16.9■□□□□ 0.3
RER2P35196 SHR5YOL110W 714 nt16.82■□□□□ 0.28
RER2P35196 YDJ1YNL064C 1230 nt16.7■□□□□ 0.26
RER2P35196 YER088W-BYER088W-B 147 nt16.57■□□□□ 0.24
RER2P35196 RSB1YOR049C 1065 nt16.55■□□□□ 0.24
RER2P35196 DEP1YAL013W 1218 nt16.39■□□□□ 0.21
RER2P35196 GAR1YHR089C 618 nt16.37■□□□□ 0.21
RER2P35196 URN1YPR152C 1398 nt16.36■□□□□ 0.21
RER2P35196 PUT4YOR348C 1884 nt16.18■□□□□ 0.18
RER2P35196 PST2YDR032C 597 nt16.16■□□□□ 0.18
RER2P35196 OPI9YLR338W 858 nt16.09■□□□□ 0.17
RER2P35196 YNL208WYNL208W 600 nt16.08■□□□□ 0.16
RER2P35196 RPN10YHR200W 807 nt16.07■□□□□ 0.16
RER2P35196 SAH1YER043C 1350 nt16.01■□□□□ 0.15
RER2P35196 ARE1YCR048W 1833 nt15.91■□□□□ 0.14
RER2P35196 TIR1YER011W 765 nt15.8■□□□□ 0.12
RER2P35196 POA1YBR022W 534 nt15.7■□□□□ 0.1
RER2P35196 YHR049C-AYHR049C-A 297 nt15.69■□□□□ 0.1
RER2P35196 SSA1YAL005C 1929 nt15.63■□□□□ 0.09
RER2P35196 PUN1YLR414C 792 nt15.6■□□□□ 0.09
RER2P35196 YJR018WYJR018W 363 nt15.59■□□□□ 0.09
RER2P35196 YKL097CYKL097C 411 nt15.52■□□□□ 0.08
RER2P35196 SHU1YHL006C 453 nt15.51■□□□□ 0.07
RER2P35196 PTC2YER089C 1395 nt15.44■□□□□ 0.06
RER2P35196 SRB2YHR041C 633 nt15.42■□□□□ 0.06
RER2P35196 YJR120WYJR120W 351 nt15.4■□□□□ 0.06
RER2P35196 BUD23YCR047C 828 nt15.35■□□□□ 0.05
RER2P35196 BSC6YOL137W 1494 nt15.33■□□□□ 0.04
RER2P35196 YAL037C-BYAL037C-B 975 nt15.3■□□□□ 0.04
RER2P35196 RPP2BYDR382W 333 nt15.26■□□□□ 0.03
RER2P35196 NAB2YGL122C 1578 nt15.21■□□□□ 0.03
RER2P35196 WWM1YFL010C 636 nt15.14■□□□□ 0.01
RER2P35196 FPR4YLR449W 1179 nt15.03■□□□□ -0
RER2P35196 DAL1YIR027C 1383 nt15.02■□□□□ -0
RER2P35196 FIS1YIL065C 468 nt15.02■□□□□ -0
RER2P35196 INM2YDR287W 879 nt15.01□□□□□ -0.01
RER2P35196 YGR021WYGR021W 873 nt15□□□□□ -0.01
RER2P35196 HOM6YJR139C 1080 nt14.99□□□□□ -0.01
RER2P35196 BDH2YAL061W 1254 nt14.98□□□□□ -0.01
RER2P35196 SSA3YBL075C 1950 nt14.95□□□□□ -0.02
RER2P35196 MNP1YGL068W 585 nt14.95□□□□□ -0.02
RER2P35196 YOR139CYOR139C 393 nt14.92□□□□□ -0.02
RER2P35196 PHO4YFR034C 939 nt14.89□□□□□ -0.03
RER2P35196 YBL100CYBL100C 315 nt14.89□□□□□ -0.03
RER2P35196 YFL021C-AYFL021C-A 855 nt14.84□□□□□ -0.03
RER2P35196 LSM3YLR438C-A 270 nt14.78□□□□□ -0.04
RER2P35196 RKM5YLR137W 1104 nt14.77□□□□□ -0.05
RER2P35196 NPL3YDR432W 1245 nt14.75□□□□□ -0.05
RER2P35196 FUN26YAL022C 1554 nt14.73□□□□□ -0.05
RER2P35196 TRM9YML014W 840 nt14.7□□□□□ -0.06
RER2P35196 YOL037CYOL037C 354 nt14.65□□□□□ -0.06
RER2P35196 YPS1YLR120C 1710 nt14.58□□□□□ -0.07
RER2P35196 SPT5YML010W 3192 nt14.57□□□□□ -0.08
RER2P35196 CCT6YDR188W 1641 nt14.54□□□□□ -0.08
RER2P35196 YDR095CYDR095C 411 nt14.49□□□□□ -0.09
RER2P35196 ALF1YNL148C 765 nt14.48□□□□□ -0.09
RER2P35196 YHR165W-AYHR165W-A 312 nt14.42□□□□□ -0.1
RER2P35196 SUF2tP(AGG)C 72 nt14.38□□□□□ -0.11
RER2P35196 SUF10tP(AGG)N 72 nt14.38□□□□□ -0.11
RER2P35196 MEP2YNL142W 1500 nt14.37□□□□□ -0.11
RER2P35196 tM(CAU)CtM(CAU)C 72 nt14.35□□□□□ -0.11
RER2P35196 IMT4tM(CAU)E 72 nt14.35□□□□□ -0.11
RER2P35196 IMT3tM(CAU)J3 72 nt14.35□□□□□ -0.11
RER2P35196 IMT1tM(CAU)O1 72 nt14.35□□□□□ -0.11
RER2P35196 IMT2tM(CAU)P 72 nt14.35□□□□□ -0.11
RER2P35196 YLR281CYLR281C 468 nt14.35□□□□□ -0.11
RER2P35196 WHI5YOR083W 888 nt14.31□□□□□ -0.12
RER2P35196 SIS1YNL007C 1059 nt14.28□□□□□ -0.12
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms