Protein–RNA interactions for Protein: P41909

PXA1, Peroxisomal long-chain fatty acid import protein 2, yeastyeast

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PXA1P41909 NSR1YGR159C 1245 nt20.66■□□□□ 0.9
PXA1P41909 YML009W-BYML009W-B 477 nt20.56■□□□□ 0.88
PXA1P41909 NOP1YDL014W 984 nt20■□□□□ 0.79
PXA1P41909 MDJ1YFL016C 1536 nt18.93■□□□□ 0.62
PXA1P41909 YKL036CYKL036C 393 nt18.33■□□□□ 0.52
PXA1P41909 YJL027CYJL027C 417 nt17.46■□□□□ 0.39
PXA1P41909 Q0297Q0297 156 nt17.44■□□□□ 0.38
PXA1P41909 SRX1YKL086W 384 nt17.44■□□□□ 0.38
PXA1P41909 SCS3YGL126W 1143 nt16.6■□□□□ 0.25
PXA1P41909 YCR051WYCR051W 669 nt16.54■□□□□ 0.24
PXA1P41909 DBP2YNL112W 1641 nt16.41■□□□□ 0.22
PXA1P41909 YBR190WYBR190W 312 nt16.29■□□□□ 0.2
PXA1P41909 RTC3YHR087W 336 nt16■□□□□ 0.15
PXA1P41909 YOL085CYOL085C 342 nt15.88■□□□□ 0.13
PXA1P41909 TRN1tP(UGG)A 72 nt15.81■□□□□ 0.12
PXA1P41909 SUF9tP(UGG)F 72 nt15.81■□□□□ 0.12
PXA1P41909 SUF8tP(UGG)H 72 nt15.81■□□□□ 0.12
PXA1P41909 tP(UGG)LtP(UGG)L 72 nt15.81■□□□□ 0.12
PXA1P41909 SUF7tP(UGG)M 72 nt15.81■□□□□ 0.12
PXA1P41909 tP(UGG)N1tP(UGG)N1 72 nt15.81■□□□□ 0.12
PXA1P41909 tP(UGG)N2tP(UGG)N2 72 nt15.81■□□□□ 0.12
PXA1P41909 tP(UGG)O1tP(UGG)O1 72 nt15.81■□□□□ 0.12
PXA1P41909 SUF11tP(UGG)O2 72 nt15.81■□□□□ 0.12
PXA1P41909 CCC1YLR220W 969 nt15.66■□□□□ 0.1
PXA1P41909 RPP1BYDL130W 321 nt15.65■□□□□ 0.1
PXA1P41909 SSA3YBL075C 1950 nt15.65■□□□□ 0.1
PXA1P41909 PKP1YIL042C 1185 nt15.62■□□□□ 0.09
PXA1P41909 RVS167YDR388W 1449 nt15.44■□□□□ 0.06
PXA1P41909 PUT4YOR348C 1884 nt15.2■□□□□ 0.02
PXA1P41909 SCJ1YMR214W 1134 nt15.11■□□□□ 0.01
PXA1P41909 PET122YER153C 765 nt14.94□□□□□ -0.02
PXA1P41909 tP(UGG)O3tP(UGG)O3 72 nt14.94□□□□□ -0.02
PXA1P41909 ATS1YAL020C 1002 nt14.84□□□□□ -0.03
PXA1P41909 SCR1SCR1 522 nt14.8□□□□□ -0.04
PXA1P41909 POA1YBR022W 534 nt14.75□□□□□ -0.05
PXA1P41909 ARE1YCR048W 1833 nt14.75□□□□□ -0.05
PXA1P41909 SHR5YOL110W 714 nt14.69□□□□□ -0.06
PXA1P41909 URN1YPR152C 1398 nt14.69□□□□□ -0.06
PXA1P41909 SAH1YER043C 1350 nt14.65□□□□□ -0.06
PXA1P41909 YHR049C-AYHR049C-A 297 nt14.62□□□□□ -0.07
PXA1P41909 OPI9YLR338W 858 nt14.56□□□□□ -0.08
PXA1P41909 DEP1YAL013W 1218 nt14.53□□□□□ -0.08
PXA1P41909 BSC6YOL137W 1494 nt14.52□□□□□ -0.08
PXA1P41909 RRN5YLR141W 1092 nt14.52□□□□□ -0.09
PXA1P41909 YDJ1YNL064C 1230 nt14.47□□□□□ -0.09
PXA1P41909 RPN10YHR200W 807 nt14.38□□□□□ -0.11
PXA1P41909 BUD23YCR047C 828 nt14.3□□□□□ -0.12
PXA1P41909 YER088W-BYER088W-B 147 nt14.23□□□□□ -0.13
PXA1P41909 YNL208WYNL208W 600 nt14.21□□□□□ -0.13
PXA1P41909 RSB1YOR049C 1065 nt14.19□□□□□ -0.14
PXA1P41909 PUN1YLR414C 792 nt14.17□□□□□ -0.14
PXA1P41909 GAR1YHR089C 618 nt14.15□□□□□ -0.14
PXA1P41909 SPT5YML010W 3192 nt14.12□□□□□ -0.15
PXA1P41909 PTC2YER089C 1395 nt14.1□□□□□ -0.15
PXA1P41909 SSA4YER103W 1929 nt14.03□□□□□ -0.16
PXA1P41909 NAB2YGL122C 1578 nt14□□□□□ -0.17
PXA1P41909 YJR018WYJR018W 363 nt13.98□□□□□ -0.17
PXA1P41909 PST2YDR032C 597 nt13.76□□□□□ -0.21
PXA1P41909 FPR4YLR449W 1179 nt13.74□□□□□ -0.21
PXA1P41909 DAL1YIR027C 1383 nt13.69□□□□□ -0.22
PXA1P41909 MEP2YNL142W 1500 nt13.68□□□□□ -0.22
PXA1P41909 TIR1YER011W 765 nt13.67□□□□□ -0.22
PXA1P41909 FIS1YIL065C 468 nt13.66□□□□□ -0.22
PXA1P41909 RPP2BYDR382W 333 nt13.59□□□□□ -0.23
PXA1P41909 INM2YDR287W 879 nt13.56□□□□□ -0.24
PXA1P41909 PHO4YFR034C 939 nt13.55□□□□□ -0.24
PXA1P41909 SSA1YAL005C 1929 nt13.51□□□□□ -0.25
PXA1P41909 YJR120WYJR120W 351 nt13.5□□□□□ -0.25
PXA1P41909 BDF1YLR399C 2061 nt13.48□□□□□ -0.25
PXA1P41909 YPS1YLR120C 1710 nt13.47□□□□□ -0.25
PXA1P41909 YHR165W-AYHR165W-A 312 nt13.45□□□□□ -0.26
PXA1P41909 DCW1YKL046C 1350 nt13.45□□□□□ -0.26
PXA1P41909 YMR090WYMR090W 684 nt13.33□□□□□ -0.28
PXA1P41909 YBL100CYBL100C 315 nt13.33□□□□□ -0.28
PXA1P41909 TAT1YBR069C 1860 nt13.29□□□□□ -0.28
PXA1P41909 YDR095CYDR095C 411 nt13.29□□□□□ -0.28
PXA1P41909 EMI2YDR516C 1503 nt13.28□□□□□ -0.28
PXA1P41909 SRB2YHR041C 633 nt13.23□□□□□ -0.29
PXA1P41909 SHU1YHL006C 453 nt13.2□□□□□ -0.3
PXA1P41909 YBR220CYBR220C 1683 nt13.18□□□□□ -0.3
PXA1P41909 YKL097CYKL097C 411 nt13.18□□□□□ -0.3
PXA1P41909 ALF1YNL148C 765 nt13.16□□□□□ -0.3
PXA1P41909 BDH2YAL061W 1254 nt13.14□□□□□ -0.31
PXA1P41909 FUN26YAL022C 1554 nt13.14□□□□□ -0.31
PXA1P41909 YDL221WYDL221W 552 nt13.1□□□□□ -0.31
PXA1P41909 RPP2AYOL039W 321 nt13.09□□□□□ -0.31
PXA1P41909 SDH1YKL148C 1923 nt13.06□□□□□ -0.32
PXA1P41909 TRM9YML014W 840 nt13.06□□□□□ -0.32
PXA1P41909 CAC2YML102W 1407 nt13.05□□□□□ -0.32
PXA1P41909 WWM1YFL010C 636 nt13.04□□□□□ -0.32
PXA1P41909 YAL037C-BYAL037C-B 975 nt13.02□□□□□ -0.33
PXA1P41909 PTP1YDL230W 1008 nt13.01□□□□□ -0.33
PXA1P41909 YGR021WYGR021W 873 nt12.97□□□□□ -0.33
PXA1P41909 PAC11YDR488C 1602 nt12.92□□□□□ -0.34
PXA1P41909 SCC4YER147C 1875 nt12.92□□□□□ -0.34
PXA1P41909 HOM6YJR139C 1080 nt12.9□□□□□ -0.34
PXA1P41909 SUF2tP(AGG)C 72 nt12.89□□□□□ -0.35
PXA1P41909 SUF10tP(AGG)N 72 nt12.89□□□□□ -0.35
PXA1P41909 LSM3YLR438C-A 270 nt12.87□□□□□ -0.35
PXA1P41909 CCT6YDR188W 1641 nt12.87□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms