Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
HRH3Q9Y5N1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
HRH3Q9Y5N1 AC100797.4-201ENST00000631653 1827 ntBASIC23.39■■□□□ 1.33
HRH3Q9Y5N1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.39■■□□□ 1.33
HRH3Q9Y5N1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
HRH3Q9Y5N1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
HRH3Q9Y5N1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
HRH3Q9Y5N1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
HRH3Q9Y5N1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.37■■□□□ 1.33
HRH3Q9Y5N1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HRH3Q9Y5N1 AP004833.2-201ENST00000532228 1454 ntBASIC23.37■■□□□ 1.33
HRH3Q9Y5N1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.37■■□□□ 1.33
HRH3Q9Y5N1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.37■■□□□ 1.33
HRH3Q9Y5N1 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.37■■□□□ 1.33
HRH3Q9Y5N1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HRH3Q9Y5N1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.36■■□□□ 1.33
HRH3Q9Y5N1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HRH3Q9Y5N1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
HRH3Q9Y5N1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.36■■□□□ 1.33
HRH3Q9Y5N1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HRH3Q9Y5N1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HRH3Q9Y5N1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HRH3Q9Y5N1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.34■■□□□ 1.33
HRH3Q9Y5N1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HRH3Q9Y5N1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HRH3Q9Y5N1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
HRH3Q9Y5N1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.33■■□□□ 1.33
HRH3Q9Y5N1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.33■■□□□ 1.33
HRH3Q9Y5N1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.33■■□□□ 1.33
HRH3Q9Y5N1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
HRH3Q9Y5N1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
HRH3Q9Y5N1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.32■■□□□ 1.32
HRH3Q9Y5N1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HRH3Q9Y5N1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.32■■□□□ 1.32
HRH3Q9Y5N1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HRH3Q9Y5N1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HRH3Q9Y5N1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HRH3Q9Y5N1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
HRH3Q9Y5N1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
HRH3Q9Y5N1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
HRH3Q9Y5N1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HRH3Q9Y5N1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.3■■□□□ 1.32
HRH3Q9Y5N1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HRH3Q9Y5N1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HRH3Q9Y5N1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HRH3Q9Y5N1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.3■■□□□ 1.32
HRH3Q9Y5N1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
HRH3Q9Y5N1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HRH3Q9Y5N1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
HRH3Q9Y5N1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HRH3Q9Y5N1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
HRH3Q9Y5N1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HRH3Q9Y5N1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
HRH3Q9Y5N1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HRH3Q9Y5N1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HRH3Q9Y5N1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HRH3Q9Y5N1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.27■■□□□ 1.32
HRH3Q9Y5N1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HRH3Q9Y5N1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.27■■□□□ 1.32
HRH3Q9Y5N1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
HRH3Q9Y5N1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HRH3Q9Y5N1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.26■■□□□ 1.31
HRH3Q9Y5N1 AC110285.7-201ENST00000624417 1536 ntBASIC23.26■■□□□ 1.31
HRH3Q9Y5N1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HRH3Q9Y5N1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.25■■□□□ 1.31
HRH3Q9Y5N1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HRH3Q9Y5N1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HRH3Q9Y5N1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.25■■□□□ 1.31
HRH3Q9Y5N1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HRH3Q9Y5N1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HRH3Q9Y5N1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.24■■□□□ 1.31
HRH3Q9Y5N1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HRH3Q9Y5N1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HRH3Q9Y5N1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
HRH3Q9Y5N1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
HRH3Q9Y5N1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
HRH3Q9Y5N1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.22■■□□□ 1.31
HRH3Q9Y5N1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.22■■□□□ 1.31
HRH3Q9Y5N1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.22■■□□□ 1.31
HRH3Q9Y5N1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
HRH3Q9Y5N1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HRH3Q9Y5N1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.21■■□□□ 1.31
HRH3Q9Y5N1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HRH3Q9Y5N1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HRH3Q9Y5N1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HRH3Q9Y5N1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HRH3Q9Y5N1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HRH3Q9Y5N1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HRH3Q9Y5N1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
HRH3Q9Y5N1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
HRH3Q9Y5N1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
HRH3Q9Y5N1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HRH3Q9Y5N1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
HRH3Q9Y5N1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HRH3Q9Y5N1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HRH3Q9Y5N1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HRH3Q9Y5N1 DRD5P2-201ENST00000421395 2012 ntBASIC23.19■■□□□ 1.3
HRH3Q9Y5N1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HRH3Q9Y5N1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
HRH3Q9Y5N1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms