Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC008813.1-201ENST00000536597 885 ntBASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NOTCH3Q9UM47 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH3Q9UM47 AC092296.2-201ENST00000589470 999 ntBASIC19.43■□□□□ 0.7
NOTCH3Q9UM47 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH3Q9UM47 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 RARRES2P1-201ENST00000474487 481 ntBASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 MIR219A2-201ENST00000608502 1504 ntBASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NOTCH3Q9UM47 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NOTCH3Q9UM47 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.4■□□□□ 0.7
NOTCH3Q9UM47 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 AC110285.7-201ENST00000624417 1536 ntBASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 ATP5G2P3-201ENST00000429083 425 ntBASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NOTCH3Q9UM47 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.37■□□□□ 0.69
NOTCH3Q9UM47 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NOTCH3Q9UM47 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NOTCH3Q9UM47 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NOTCH3Q9UM47 AC004987.1-201ENST00000428627 508 ntBASIC19.36■□□□□ 0.69
NOTCH3Q9UM47 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NOTCH3Q9UM47 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.36■□□□□ 0.69
NOTCH3Q9UM47 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.36■□□□□ 0.69
NOTCH3Q9UM47 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NOTCH3Q9UM47 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NOTCH3Q9UM47 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NOTCH3Q9UM47 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.34■□□□□ 0.69
NOTCH3Q9UM47 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NOTCH3Q9UM47 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NOTCH3Q9UM47 AL135925.1-201ENST00000605920 1701 ntBASIC19.33■□□□□ 0.68
NOTCH3Q9UM47 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NOTCH3Q9UM47 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NOTCH3Q9UM47 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NOTCH3Q9UM47 U85056.1-201ENST00000616429 682 ntBASIC19.32■□□□□ 0.68
NOTCH3Q9UM47 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NOTCH3Q9UM47 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH3Q9UM47 AL035685.1-201ENST00000636663 812 ntBASIC19.31■□□□□ 0.68
NOTCH3Q9UM47 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NOTCH3Q9UM47 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH3Q9UM47 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NOTCH3Q9UM47 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH3Q9UM47 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH3Q9UM47 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH3Q9UM47 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.3■□□□□ 0.68
NOTCH3Q9UM47 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH3Q9UM47 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.3■□□□□ 0.68
NOTCH3Q9UM47 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH3Q9UM47 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH3Q9UM47 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH3Q9UM47 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH3Q9UM47 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH3Q9UM47 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms