Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAB1BQ9H0U4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.62■■□□□ 1.05
RAB1BQ9H0U4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB1BQ9H0U4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAB1BQ9H0U4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAB1BQ9H0U4 GPX1-201ENST00000419349 1106 ntBASIC21.61■■□□□ 1.05
RAB1BQ9H0U4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAB1BQ9H0U4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.61■■□□□ 1.05
RAB1BQ9H0U4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.61■■□□□ 1.05
RAB1BQ9H0U4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.61■■□□□ 1.05
RAB1BQ9H0U4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB1BQ9H0U4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RAB1BQ9H0U4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB1BQ9H0U4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB1BQ9H0U4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.6■■□□□ 1.05
RAB1BQ9H0U4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB1BQ9H0U4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RAB1BQ9H0U4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB1BQ9H0U4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB1BQ9H0U4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAB1BQ9H0U4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB1BQ9H0U4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RAB1BQ9H0U4 AC148477.6-201ENST00000623746 465 ntBASIC21.58■■□□□ 1.05
RAB1BQ9H0U4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.58■■□□□ 1.04
RAB1BQ9H0U4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.58■■□□□ 1.04
RAB1BQ9H0U4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB1BQ9H0U4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB1BQ9H0U4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB1BQ9H0U4 AC022413.1-201ENST00000624602 984 ntBASIC21.56■■□□□ 1.04
RAB1BQ9H0U4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RAB1BQ9H0U4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB1BQ9H0U4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
RAB1BQ9H0U4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB1BQ9H0U4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB1BQ9H0U4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB1BQ9H0U4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB1BQ9H0U4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.55■■□□□ 1.04
RAB1BQ9H0U4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB1BQ9H0U4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RAB1BQ9H0U4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAB1BQ9H0U4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB1BQ9H0U4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.53■■□□□ 1.04
RAB1BQ9H0U4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB1BQ9H0U4 RNF126P1-201ENST00000567452 1320 ntBASIC21.53■■□□□ 1.04
RAB1BQ9H0U4 RARRES2P2-201ENST00000394842 485 ntBASIC21.52■■□□□ 1.04
RAB1BQ9H0U4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RAB1BQ9H0U4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB1BQ9H0U4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.51■■□□□ 1.03
RAB1BQ9H0U4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB1BQ9H0U4 MIR219A2-201ENST00000608502 1504 ntBASIC21.5■■□□□ 1.03
RAB1BQ9H0U4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.5■■□□□ 1.03
RAB1BQ9H0U4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RAB1BQ9H0U4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RAB1BQ9H0U4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.5■■□□□ 1.03
RAB1BQ9H0U4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB1BQ9H0U4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB1BQ9H0U4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
RAB1BQ9H0U4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.48■■□□□ 1.03
RAB1BQ9H0U4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB1BQ9H0U4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB1BQ9H0U4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RAB1BQ9H0U4 AC100797.4-201ENST00000631653 1827 ntBASIC21.47■■□□□ 1.03
RAB1BQ9H0U4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.47■■□□□ 1.03
RAB1BQ9H0U4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB1BQ9H0U4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB1BQ9H0U4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAB1BQ9H0U4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAB1BQ9H0U4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.46■■□□□ 1.03
RAB1BQ9H0U4 AC126177.7-201ENST00000547904 679 ntBASIC21.46■■□□□ 1.03
RAB1BQ9H0U4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB1BQ9H0U4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAB1BQ9H0U4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB1BQ9H0U4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB1BQ9H0U4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB1BQ9H0U4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB1BQ9H0U4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAB1BQ9H0U4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.45■■□□□ 1.02
RAB1BQ9H0U4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAB1BQ9H0U4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB1BQ9H0U4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB1BQ9H0U4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB1BQ9H0U4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB1BQ9H0U4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB1BQ9H0U4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB1BQ9H0U4 ABHD17AP5-201ENST00000580133 923 ntBASIC21.43■■□□□ 1.02
RAB1BQ9H0U4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB1BQ9H0U4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB1BQ9H0U4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.43■■□□□ 1.02
RAB1BQ9H0U4 AL139393.2-201ENST00000608721 2025 ntBASIC21.43■■□□□ 1.02
RAB1BQ9H0U4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.42■■□□□ 1.02
RAB1BQ9H0U4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RAB1BQ9H0U4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.42■■□□□ 1.02
RAB1BQ9H0U4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
RAB1BQ9H0U4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.42■■□□□ 1.02
RAB1BQ9H0U4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RAB1BQ9H0U4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB1BQ9H0U4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.41■■□□□ 1.02
RAB1BQ9H0U4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB1BQ9H0U4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.41■■□□□ 1.02
RAB1BQ9H0U4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms