Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RAB40CQ96S21 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40CQ96S21 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB40CQ96S21 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB40CQ96S21 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40CQ96S21 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40CQ96S21 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB40CQ96S21 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB40CQ96S21 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB40CQ96S21 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.48■□□□□ 0.87
RAB40CQ96S21 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
RAB40CQ96S21 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB40CQ96S21 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB40CQ96S21 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RAB40CQ96S21 AC091060.1-201ENST00000623524 1766 ntBASIC20.46■□□□□ 0.87
RAB40CQ96S21 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB40CQ96S21 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RAB40CQ96S21 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB40CQ96S21 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40CQ96S21 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40CQ96S21 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40CQ96S21 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40CQ96S21 AC100797.4-201ENST00000631653 1827 ntBASIC20.45■□□□□ 0.86
RAB40CQ96S21 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40CQ96S21 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40CQ96S21 AP002414.2-202ENST00000590929 1450 ntBASIC20.44■□□□□ 0.86
RAB40CQ96S21 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40CQ96S21 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40CQ96S21 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40CQ96S21 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40CQ96S21 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40CQ96S21 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40CQ96S21 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40CQ96S21 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB40CQ96S21 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40CQ96S21 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40CQ96S21 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RAB40CQ96S21 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.42■□□□□ 0.86
RAB40CQ96S21 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40CQ96S21 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40CQ96S21 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40CQ96S21 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.41■□□□□ 0.86
RAB40CQ96S21 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40CQ96S21 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB40CQ96S21 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB40CQ96S21 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RAB40CQ96S21 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAB40CQ96S21 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB40CQ96S21 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB40CQ96S21 AC145676.1-201ENST00000514988 2004 ntBASIC20.39■□□□□ 0.85
RAB40CQ96S21 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
RAB40CQ96S21 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB40CQ96S21 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40CQ96S21 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40CQ96S21 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB40CQ96S21 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40CQ96S21 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40CQ96S21 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40CQ96S21 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB40CQ96S21 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB40CQ96S21 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB40CQ96S21 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB40CQ96S21 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB40CQ96S21 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB40CQ96S21 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.36■□□□□ 0.85
RAB40CQ96S21 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.36■□□□□ 0.85
RAB40CQ96S21 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.36■□□□□ 0.85
RAB40CQ96S21 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RAB40CQ96S21 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40CQ96S21 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40CQ96S21 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB40CQ96S21 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.35■□□□□ 0.85
RAB40CQ96S21 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40CQ96S21 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40CQ96S21 RARRES2P7-201ENST00000567349 469 ntBASIC20.34■□□□□ 0.85
RAB40CQ96S21 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB40CQ96S21 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAB40CQ96S21 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RAB40CQ96S21 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RAB40CQ96S21 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40CQ96S21 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.32■□□□□ 0.84
RAB40CQ96S21 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.32■□□□□ 0.84
RAB40CQ96S21 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40CQ96S21 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40CQ96S21 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40CQ96S21 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40CQ96S21 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40CQ96S21 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40CQ96S21 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40CQ96S21 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.31■□□□□ 0.84
RAB40CQ96S21 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40CQ96S21 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40CQ96S21 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RAB40CQ96S21 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RAB40CQ96S21 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.3■□□□□ 0.84
RAB40CQ96S21 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40CQ96S21 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40CQ96S21 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40CQ96S21 AC020928.2-201ENST00000588717 2197 ntBASIC20.29■□□□□ 0.84
RAB40CQ96S21 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms