Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NAF1Q96HR8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NAF1Q96HR8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
NAF1Q96HR8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NAF1Q96HR8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.34■■□□□ 1.65
NAF1Q96HR8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NAF1Q96HR8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NAF1Q96HR8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
NAF1Q96HR8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
NAF1Q96HR8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
NAF1Q96HR8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NAF1Q96HR8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NAF1Q96HR8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NAF1Q96HR8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.31■■□□□ 1.64
NAF1Q96HR8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NAF1Q96HR8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NAF1Q96HR8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NAF1Q96HR8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NAF1Q96HR8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
NAF1Q96HR8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
NAF1Q96HR8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
NAF1Q96HR8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NAF1Q96HR8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NAF1Q96HR8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.29■■□□□ 1.64
NAF1Q96HR8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NAF1Q96HR8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NAF1Q96HR8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.28■■□□□ 1.64
NAF1Q96HR8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NAF1Q96HR8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NAF1Q96HR8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NAF1Q96HR8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
NAF1Q96HR8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
NAF1Q96HR8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
NAF1Q96HR8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.25■■□□□ 1.63
NAF1Q96HR8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NAF1Q96HR8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NAF1Q96HR8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
NAF1Q96HR8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
NAF1Q96HR8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NAF1Q96HR8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
NAF1Q96HR8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.23■■□□□ 1.63
NAF1Q96HR8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NAF1Q96HR8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
NAF1Q96HR8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NAF1Q96HR8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.22■■□□□ 1.63
NAF1Q96HR8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NAF1Q96HR8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.22■■□□□ 1.63
NAF1Q96HR8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
NAF1Q96HR8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NAF1Q96HR8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NAF1Q96HR8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NAF1Q96HR8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NAF1Q96HR8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NAF1Q96HR8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
NAF1Q96HR8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NAF1Q96HR8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.19■■□□□ 1.62
NAF1Q96HR8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
NAF1Q96HR8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NAF1Q96HR8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
NAF1Q96HR8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NAF1Q96HR8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NAF1Q96HR8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NAF1Q96HR8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
NAF1Q96HR8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.17■■□□□ 1.62
NAF1Q96HR8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
NAF1Q96HR8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.17■■□□□ 1.62
NAF1Q96HR8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.16■■□□□ 1.62
NAF1Q96HR8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NAF1Q96HR8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NAF1Q96HR8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.15■■□□□ 1.62
NAF1Q96HR8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
NAF1Q96HR8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NAF1Q96HR8 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L13-201ENST00000554103 1267 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L15-201ENST00000611059 1267 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L23-201ENST00000615195 1269 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L24-201ENST00000617576 1269 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L22-201ENST00000618238 1269 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L20-201ENST00000619712 1269 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L21-201ENST00000622058 1269 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L10-201ENST00000622460 1267 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 DUX4L25-201ENST00000624915 1269 ntBASIC25.14■■□□□ 1.62
NAF1Q96HR8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
NAF1Q96HR8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.14■■□□□ 1.61
NAF1Q96HR8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
NAF1Q96HR8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.13■■□□□ 1.61
NAF1Q96HR8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
NAF1Q96HR8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
NAF1Q96HR8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NAF1Q96HR8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NAF1Q96HR8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.12■■□□□ 1.61
NAF1Q96HR8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms