Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RCBTB1Q8NDN9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.54■■□□□ 1.52
RCBTB1Q8NDN9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
RCBTB1Q8NDN9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RCBTB1Q8NDN9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
RCBTB1Q8NDN9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
RCBTB1Q8NDN9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RCBTB1Q8NDN9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.52■■□□□ 1.52
RCBTB1Q8NDN9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
RCBTB1Q8NDN9 ST7-AS1-201ENST00000456775 1889 ntBASIC24.52■■□□□ 1.52
RCBTB1Q8NDN9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.52■■□□□ 1.52
RCBTB1Q8NDN9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RCBTB1Q8NDN9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RCBTB1Q8NDN9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.52■■□□□ 1.52
RCBTB1Q8NDN9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.52■■□□□ 1.52
RCBTB1Q8NDN9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
RCBTB1Q8NDN9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RCBTB1Q8NDN9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RCBTB1Q8NDN9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
RCBTB1Q8NDN9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RCBTB1Q8NDN9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
RCBTB1Q8NDN9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RCBTB1Q8NDN9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
RCBTB1Q8NDN9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RCBTB1Q8NDN9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RCBTB1Q8NDN9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.49■■□□□ 1.51
RCBTB1Q8NDN9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RCBTB1Q8NDN9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
RCBTB1Q8NDN9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RCBTB1Q8NDN9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RCBTB1Q8NDN9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
RCBTB1Q8NDN9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RCBTB1Q8NDN9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.47■■□□□ 1.51
RCBTB1Q8NDN9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RCBTB1Q8NDN9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.47■■□□□ 1.51
RCBTB1Q8NDN9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.46■■□□□ 1.51
RCBTB1Q8NDN9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.45■■□□□ 1.51
RCBTB1Q8NDN9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RCBTB1Q8NDN9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.45■■□□□ 1.51
RCBTB1Q8NDN9 AC148477.6-201ENST00000623746 465 ntBASIC24.45■■□□□ 1.5
RCBTB1Q8NDN9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RCBTB1Q8NDN9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.44■■□□□ 1.5
RCBTB1Q8NDN9 MIR219A2-201ENST00000608502 1504 ntBASIC24.44■■□□□ 1.5
RCBTB1Q8NDN9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RCBTB1Q8NDN9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RCBTB1Q8NDN9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
RCBTB1Q8NDN9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.43■■□□□ 1.5
RCBTB1Q8NDN9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.43■■□□□ 1.5
RCBTB1Q8NDN9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RCBTB1Q8NDN9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RCBTB1Q8NDN9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RCBTB1Q8NDN9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.42■■□□□ 1.5
RCBTB1Q8NDN9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RCBTB1Q8NDN9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RCBTB1Q8NDN9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RCBTB1Q8NDN9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RCBTB1Q8NDN9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.42■■□□□ 1.5
RCBTB1Q8NDN9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.42■■□□□ 1.5
RCBTB1Q8NDN9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
RCBTB1Q8NDN9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
RCBTB1Q8NDN9 AC060814.1-201ENST00000554326 538 ntBASIC24.4■■□□□ 1.5
RCBTB1Q8NDN9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.4■■□□□ 1.5
RCBTB1Q8NDN9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RCBTB1Q8NDN9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RCBTB1Q8NDN9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RCBTB1Q8NDN9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.39■■□□□ 1.5
RCBTB1Q8NDN9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RCBTB1Q8NDN9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RCBTB1Q8NDN9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.39■■□□□ 1.49
RCBTB1Q8NDN9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RCBTB1Q8NDN9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RCBTB1Q8NDN9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RCBTB1Q8NDN9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RCBTB1Q8NDN9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RCBTB1Q8NDN9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RCBTB1Q8NDN9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
RCBTB1Q8NDN9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.37■■□□□ 1.49
RCBTB1Q8NDN9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RCBTB1Q8NDN9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RCBTB1Q8NDN9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.37■■□□□ 1.49
RCBTB1Q8NDN9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
RCBTB1Q8NDN9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RCBTB1Q8NDN9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RCBTB1Q8NDN9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RCBTB1Q8NDN9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RCBTB1Q8NDN9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RCBTB1Q8NDN9 NTF6A-201ENST00000591175 560 ntBASIC24.36■■□□□ 1.49
RCBTB1Q8NDN9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RCBTB1Q8NDN9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RCBTB1Q8NDN9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RCBTB1Q8NDN9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.35■■□□□ 1.49
RCBTB1Q8NDN9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
RCBTB1Q8NDN9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
RCBTB1Q8NDN9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
RCBTB1Q8NDN9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RCBTB1Q8NDN9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RCBTB1Q8NDN9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RCBTB1Q8NDN9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RCBTB1Q8NDN9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RCBTB1Q8NDN9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms