Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
EFCAB3Q8N7B9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.89■■□□□ 1.58
EFCAB3Q8N7B9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
EFCAB3Q8N7B9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
EFCAB3Q8N7B9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
EFCAB3Q8N7B9 DUX4L29-201ENST00000425409 679 ntBASIC24.88■■□□□ 1.57
EFCAB3Q8N7B9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
EFCAB3Q8N7B9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
EFCAB3Q8N7B9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
EFCAB3Q8N7B9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
EFCAB3Q8N7B9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
EFCAB3Q8N7B9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
EFCAB3Q8N7B9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
EFCAB3Q8N7B9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.87■■□□□ 1.57
EFCAB3Q8N7B9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
EFCAB3Q8N7B9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
EFCAB3Q8N7B9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
EFCAB3Q8N7B9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
EFCAB3Q8N7B9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.86■■□□□ 1.57
EFCAB3Q8N7B9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.86■■□□□ 1.57
EFCAB3Q8N7B9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
EFCAB3Q8N7B9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.85■■□□□ 1.57
EFCAB3Q8N7B9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
EFCAB3Q8N7B9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
EFCAB3Q8N7B9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.84■■□□□ 1.57
EFCAB3Q8N7B9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
EFCAB3Q8N7B9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
EFCAB3Q8N7B9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.84■■□□□ 1.57
EFCAB3Q8N7B9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.84■■□□□ 1.57
EFCAB3Q8N7B9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
EFCAB3Q8N7B9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
EFCAB3Q8N7B9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
EFCAB3Q8N7B9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
EFCAB3Q8N7B9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
EFCAB3Q8N7B9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
EFCAB3Q8N7B9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.81■■□□□ 1.56
EFCAB3Q8N7B9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
EFCAB3Q8N7B9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
EFCAB3Q8N7B9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
EFCAB3Q8N7B9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
EFCAB3Q8N7B9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
EFCAB3Q8N7B9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.8■■□□□ 1.56
EFCAB3Q8N7B9 MIR4449-201ENST00000578365 66 ntBASIC24.8■■□□□ 1.56
EFCAB3Q8N7B9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
EFCAB3Q8N7B9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.8■■□□□ 1.56
EFCAB3Q8N7B9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.79■■□□□ 1.56
EFCAB3Q8N7B9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
EFCAB3Q8N7B9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
EFCAB3Q8N7B9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
EFCAB3Q8N7B9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.77■■□□□ 1.56
EFCAB3Q8N7B9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
EFCAB3Q8N7B9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
EFCAB3Q8N7B9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
EFCAB3Q8N7B9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
EFCAB3Q8N7B9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
EFCAB3Q8N7B9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
EFCAB3Q8N7B9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
EFCAB3Q8N7B9 MIR639-201ENST00000384974 98 ntBASIC24.75■■□□□ 1.55
EFCAB3Q8N7B9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.75■■□□□ 1.55
EFCAB3Q8N7B9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
EFCAB3Q8N7B9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
EFCAB3Q8N7B9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
EFCAB3Q8N7B9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
EFCAB3Q8N7B9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
EFCAB3Q8N7B9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
EFCAB3Q8N7B9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
EFCAB3Q8N7B9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.72■■□□□ 1.55
EFCAB3Q8N7B9 BX255925.1-201ENST00000566954 1854 ntBASIC24.72■■□□□ 1.55
EFCAB3Q8N7B9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.72■■□□□ 1.55
EFCAB3Q8N7B9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
EFCAB3Q8N7B9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.71■■□□□ 1.55
EFCAB3Q8N7B9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
EFCAB3Q8N7B9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.71■■□□□ 1.55
EFCAB3Q8N7B9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.71■■□□□ 1.55
EFCAB3Q8N7B9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
EFCAB3Q8N7B9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
EFCAB3Q8N7B9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.71■■□□□ 1.55
EFCAB3Q8N7B9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
EFCAB3Q8N7B9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
EFCAB3Q8N7B9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
EFCAB3Q8N7B9 AC108673.1-201ENST00000510422 1159 ntBASIC24.7■■□□□ 1.54
EFCAB3Q8N7B9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.7■■□□□ 1.54
EFCAB3Q8N7B9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
EFCAB3Q8N7B9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.7■■□□□ 1.54
EFCAB3Q8N7B9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
EFCAB3Q8N7B9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
EFCAB3Q8N7B9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.69■■□□□ 1.54
EFCAB3Q8N7B9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.69■■□□□ 1.54
EFCAB3Q8N7B9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
EFCAB3Q8N7B9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.69■■□□□ 1.54
EFCAB3Q8N7B9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.68■■□□□ 1.54
EFCAB3Q8N7B9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
EFCAB3Q8N7B9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.67■■□□□ 1.54
EFCAB3Q8N7B9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.67■■□□□ 1.54
EFCAB3Q8N7B9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
EFCAB3Q8N7B9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
EFCAB3Q8N7B9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
EFCAB3Q8N7B9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
EFCAB3Q8N7B9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
EFCAB3Q8N7B9 AC021231.2-201ENST00000594613 730 ntBASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms