Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H1AQ02539 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.18■□□□□ 0.66
HIST1H1AQ02539 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H1AQ02539 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.17■□□□□ 0.66
HIST1H1AQ02539 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HIST1H1AQ02539 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H1AQ02539 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H1AQ02539 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H1AQ02539 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.16■□□□□ 0.66
HIST1H1AQ02539 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1AQ02539 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1AQ02539 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.16■□□□□ 0.66
HIST1H1AQ02539 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1AQ02539 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.16■□□□□ 0.66
HIST1H1AQ02539 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.16■□□□□ 0.66
HIST1H1AQ02539 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1AQ02539 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HIST1H1AQ02539 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.15■□□□□ 0.66
HIST1H1AQ02539 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H1AQ02539 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HIST1H1AQ02539 BX255925.1-201ENST00000566954 1854 ntBASIC19.15■□□□□ 0.66
HIST1H1AQ02539 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HIST1H1AQ02539 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H1AQ02539 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.14■□□□□ 0.65
HIST1H1AQ02539 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H1AQ02539 AC108673.1-201ENST00000510422 1159 ntBASIC19.14■□□□□ 0.65
HIST1H1AQ02539 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
HIST1H1AQ02539 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H1AQ02539 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H1AQ02539 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.13■□□□□ 0.65
HIST1H1AQ02539 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.13■□□□□ 0.65
HIST1H1AQ02539 DUX4L28-201ENST00000623687 678 ntBASIC19.13■□□□□ 0.65
HIST1H1AQ02539 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
HIST1H1AQ02539 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1AQ02539 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1AQ02539 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1AQ02539 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1AQ02539 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1AQ02539 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1AQ02539 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.11■□□□□ 0.65
HIST1H1AQ02539 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1AQ02539 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1AQ02539 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1AQ02539 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1AQ02539 MIR3665-201ENST00000578708 105 ntBASIC19.11■□□□□ 0.65
HIST1H1AQ02539 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.11■□□□□ 0.65
HIST1H1AQ02539 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1AQ02539 AC100797.4-201ENST00000631653 1827 ntBASIC19.11■□□□□ 0.65
HIST1H1AQ02539 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1AQ02539 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HIST1H1AQ02539 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.1■□□□□ 0.65
HIST1H1AQ02539 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1AQ02539 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
HIST1H1AQ02539 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.1■□□□□ 0.65
HIST1H1AQ02539 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HIST1H1AQ02539 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1AQ02539 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1AQ02539 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1AQ02539 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1AQ02539 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1AQ02539 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1AQ02539 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.08■□□□□ 0.65
HIST1H1AQ02539 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1AQ02539 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
HIST1H1AQ02539 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1AQ02539 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.08■□□□□ 0.64
HIST1H1AQ02539 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H1AQ02539 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.08■□□□□ 0.64
HIST1H1AQ02539 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H1AQ02539 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H1AQ02539 AP006261.1-201ENST00000584783 668 ntBASIC19.07■□□□□ 0.64
HIST1H1AQ02539 MIR6090-201ENST00000622481 60 ntBASIC19.07■□□□□ 0.64
HIST1H1AQ02539 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HIST1H1AQ02539 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.07■□□□□ 0.64
HIST1H1AQ02539 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H1AQ02539 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H1AQ02539 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H1AQ02539 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H1AQ02539 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HIST1H1AQ02539 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST1H1AQ02539 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1AQ02539 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1AQ02539 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1AQ02539 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST1H1AQ02539 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1AQ02539 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H1AQ02539 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H1AQ02539 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H1AQ02539 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.04■□□□□ 0.64
HIST1H1AQ02539 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H1AQ02539 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.04■□□□□ 0.64
HIST1H1AQ02539 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H1AQ02539 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HIST1H1AQ02539 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1AQ02539 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.03■□□□□ 0.64
HIST1H1AQ02539 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1AQ02539 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H1AQ02539 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H1AQ02539 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
HIST1H1AQ02539 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms