Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 ADARB1-212ENST00000496664 5033 ntTSL 1 (best)29.13■■■□□ 2.251e-9■■□□□ 13.6
HNRNPUQ00839 ADARB1-203ENST00000389861 5031 ntTSL 1 (best)29.13■■■□□ 2.251e-9■■□□□ 13.6
HNRNPUQ00839 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC29.13■■■□□ 2.251e-9■■□□□ 13.6
HNRNPUQ00839 ADARB1-211ENST00000492414 4913 ntTSL 1 (best)27.91■■■□□ 2.061e-9■■□□□ 13.6
HNRNPUQ00839 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC26.2■■□□□ 1.782e-14■■□□□ 13.6
HNRNPUQ00839 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.581e-9■■□□□ 13.6
HNRNPUQ00839 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.532e-14■■□□□ 13.6
HNRNPUQ00839 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC23.58■■□□□ 1.371e-9■■□□□ 13.6
HNRNPUQ00839 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC22.27■■□□□ 1.161e-9■■□□□ 13.6
HNRNPUQ00839 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)18.72■□□□□ 0.592e-14■■□□□ 13.6
HNRNPUQ00839 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC17.26■□□□□ 0.351e-9■■□□□ 13.6
HNRNPUQ00839 AC245014.3-201ENST00000618589 347 ntBASIC7.54□□□□□ -1.24e-11■■□□□ 13.6
HNRNPUQ00839 RNVU1-14-201ENST00000384770 164 ntBASIC3.81□□□□□ -1.84e-11■■□□□ 13.6
HNRNPUQ00839 AC002480.1-201ENST00000442252 1282 ntTSL 1 (best) BASIC10.77□□□□□ -0.695e-6■■□□□ 13.5
HNRNPUQ00839 COL27A1-207ENST00000494090 5329 ntTSL 1 (best)25.99■■□□□ 1.751e-6■■□□□ 13.5
HNRNPUQ00839 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.281e-6■■□□□ 13.5
HNRNPUQ00839 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.772e-8■■□□□ 13.5
HNRNPUQ00839 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.722e-8■■□□□ 13.5
HNRNPUQ00839 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.442e-8■■□□□ 13.5
HNRNPUQ00839 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC17.76■□□□□ 0.432e-8■■□□□ 13.5
HNRNPUQ00839 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.222e-8■■□□□ 13.5
HNRNPUQ00839 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC24.47■■□□□ 1.516e-6■■□□□ 13.5
HNRNPUQ00839 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC20.72■□□□□ 0.916e-6■■□□□ 13.5
HNRNPUQ00839 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.26e-6■■□□□ 13.5
HNRNPUQ00839 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC10.6□□□□□ -0.716e-6■■□□□ 13.5
HNRNPUQ00839 FARP1-224ENST00000598389 747 ntTSL 57.58□□□□□ -1.26e-6■■□□□ 13.5
HNRNPUQ00839 NPLOC4-217ENST00000574897 2365 ntTSL 232.67■■■□□ 2.822e-8■■□□□ 13.5
HNRNPUQ00839 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.792e-8■■□□□ 13.5
HNRNPUQ00839 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC16.57■□□□□ 0.242e-8■■□□□ 13.5
HNRNPUQ00839 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.443e-7■■□□□ 13.4
HNRNPUQ00839 SRC-211ENST00000497734 446 ntTSL 1 (best)17.04■□□□□ 0.323e-7■■□□□ 13.4
HNRNPUQ00839 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC34.66■■■■□ 3.143e-8■■□□□ 13.4
HNRNPUQ00839 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.83e-8■■□□□ 13.4
HNRNPUQ00839 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.363e-8■■□□□ 13.4
HNRNPUQ00839 GRK6-204ENST00000502598 557 ntTSL 423.3■■□□□ 1.323e-8■■□□□ 13.4
HNRNPUQ00839 GRK6-208ENST00000511244 555 ntTSL 423.25■■□□□ 1.313e-8■■□□□ 13.4
HNRNPUQ00839 GRK6-205ENST00000506296 955 ntTSL 521.9■■□□□ 1.13e-8■■□□□ 13.4
HNRNPUQ00839 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC21.16■□□□□ 0.983e-8■■□□□ 13.4
HNRNPUQ00839 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC20.41■□□□□ 0.863e-8■■□□□ 13.4
HNRNPUQ00839 GRK6-209ENST00000512684 336 ntTSL 315.98■□□□□ 0.153e-8■■□□□ 13.4
HNRNPUQ00839 ZFAS1-207ENST00000458653 596 ntTSL 236.12■■■■□ 3.373e-7■■□□□ 13.3
HNRNPUQ00839 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)31.52■■■□□ 2.643e-7■■□□□ 13.3
HNRNPUQ00839 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)29.37■■■□□ 2.293e-7■■□□□ 13.3
HNRNPUQ00839 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC27.84■■■□□ 2.053e-7■■□□□ 13.3
HNRNPUQ00839 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)27.84■■■□□ 2.053e-7■■□□□ 13.3
HNRNPUQ00839 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.893e-7■■□□□ 13.3
HNRNPUQ00839 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.773e-7■■□□□ 13.3
HNRNPUQ00839 ETFB-203ENST00000593992 603 ntTSL 219.72■□□□□ 0.753e-7■■□□□ 13.3
HNRNPUQ00839 ETFB-205ENST00000596253 575 ntTSL 319.24■□□□□ 0.673e-7■■□□□ 13.3
HNRNPUQ00839 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC13.96□□□□□ -0.173e-7■■□□□ 13.3
HNRNPUQ00839 ZFAS1-209ENST00000620594 508 ntTSL 39.94□□□□□ -0.823e-7■■□□□ 13.3
HNRNPUQ00839 ZFAS1-204ENST00000428008 566 ntTSL 28.68□□□□□ -1.023e-7■■□□□ 13.3
HNRNPUQ00839 ZFAS1-201ENST00000326677 504 ntTSL 1 (best)8.42□□□□□ -1.063e-7■■□□□ 13.3
HNRNPUQ00839 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.714e-7■■□□□ 13.3
HNRNPUQ00839 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC14.96□□□□□ -0.014e-7■■□□□ 13.3
HNRNPUQ00839 MTRNR2L1-201ENST00000540040 1553 ntAPPRIS P1 BASIC12.29□□□□□ -0.445e-10■■□□□ 13.3
HNRNPUQ00839 MED16-209ENST00000592943 1628 ntTSL 1 (best)24.01■■□□□ 1.433e-7■■□□□ 13.2
HNRNPUQ00839 MED16-201ENST00000269814 1199 ntTSL 5 BASIC22.56■■□□□ 1.23e-7■■□□□ 13.2
HNRNPUQ00839 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.53■■□□□ 1.23e-7■■□□□ 13.2
HNRNPUQ00839 MED16-212ENST00000607471 2004 ntTSL 1 (best)22.06■■□□□ 1.123e-7■■□□□ 13.2
HNRNPUQ00839 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.063e-7■■□□□ 13.2
HNRNPUQ00839 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.49■■□□□ 1.033e-7■■□□□ 13.2
HNRNPUQ00839 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.973e-7■■□□□ 13.2
HNRNPUQ00839 MED16-210ENST00000606248 3181 ntTSL 1 (best)19.6■□□□□ 0.733e-7■■□□□ 13.2
HNRNPUQ00839 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.653e-7■■□□□ 13.2
HNRNPUQ00839 MED16-205ENST00000586017 1403 ntTSL 1 (best)19.01■□□□□ 0.633e-7■■□□□ 13.2
HNRNPUQ00839 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.553e-7■■□□□ 13.2
HNRNPUQ00839 MED16-211ENST00000606828 599 ntTSL 1 (best)17.3■□□□□ 0.363e-7■■□□□ 13.2
HNRNPUQ00839 INO80E-211ENST00000567987 1926 ntTSL 1 (best)25.38■■□□□ 1.651e-7■■□□□ 13.2
HNRNPUQ00839 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.591e-7■■□□□ 13.2
HNRNPUQ00839 INO80E-205ENST00000562441 1412 ntTSL 223.5■■□□□ 1.351e-7■■□□□ 13.2
HNRNPUQ00839 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.97■■□□□ 1.271e-7■■□□□ 13.2
HNRNPUQ00839 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.21■□□□□ 0.991e-7■■□□□ 13.2
HNRNPUQ00839 INO80E-203ENST00000540562 3064 ntTSL 219.86■□□□□ 0.771e-7■■□□□ 13.2
HNRNPUQ00839 INO80E-208ENST00000567065 883 ntTSL 319.23■□□□□ 0.671e-7■■□□□ 13.2
HNRNPUQ00839 INO80E-213ENST00000569957 4469 ntTSL 217.4■□□□□ 0.381e-7■■□□□ 13.2
HNRNPUQ00839 INO80E-204ENST00000562291 255 ntTSL 312.09□□□□□ -0.471e-7■■□□□ 13.2
HNRNPUQ00839 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.119e-8■■□□□ 13.2
HNRNPUQ00839 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.19e-8■■□□□ 13.2
HNRNPUQ00839 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC14.06□□□□□ -0.169e-8■■□□□ 13.2
HNRNPUQ00839 EFHC1-204ENST00000491749 496 ntTSL 431.83■■■□□ 2.699e-7■■□□□ 13.2
HNRNPUQ00839 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC24.71■■□□□ 1.559e-7■■□□□ 13.2
HNRNPUQ00839 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.059e-7■■□□□ 13.2
HNRNPUQ00839 EFHC1-235ENST00000637849 2746 ntTSL 520.92■□□□□ 0.949e-7■■□□□ 13.2
HNRNPUQ00839 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC20.62■□□□□ 0.899e-7■■□□□ 13.2
HNRNPUQ00839 PAQR8-203ENST00000512121 582 ntTSL 317.21■□□□□ 0.359e-7■■□□□ 13.2
HNRNPUQ00839 ACTN1-220ENST00000556433 1259 ntTSL 327.97■■■□□ 2.073e-7■■□□□ 13
HNRNPUQ00839 ACTN1-209ENST00000553659 434 ntTSL 421.14■□□□□ 0.973e-7■■□□□ 13
HNRNPUQ00839 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC19.43■□□□□ 0.73e-7■■□□□ 13
HNRNPUQ00839 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC18.84■□□□□ 0.613e-7■■□□□ 13
HNRNPUQ00839 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC18.45■□□□□ 0.543e-7■■□□□ 13
HNRNPUQ00839 ACTN1-201ENST00000193403 3779 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.113e-7■■□□□ 13
HNRNPUQ00839 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.053e-7■■□□□ 13
HNRNPUQ00839 ACTN1-221ENST00000556571 568 ntTSL 414.22□□□□□ -0.133e-7■■□□□ 13
HNRNPUQ00839 ACTN1-215ENST00000555616 919 ntTSL 312.55□□□□□ -0.43e-7■■□□□ 13
HNRNPUQ00839 ACTN1-208ENST00000553370 605 ntTSL 312.1□□□□□ -0.473e-7■■□□□ 13
HNRNPUQ00839 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.74□□□□□ -1.173e-7■■□□□ 13
HNRNPUQ00839 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.464e-9■■□□□ 13
HNRNPUQ00839 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)29.49■■■□□ 2.314e-9■■□□□ 13
HNRNPUQ00839 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.48■■■□□ 2.314e-9■■□□□ 13
Retrieved 100 of 2,288 protein–RNA pairs in 49.7 ms