RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 NISCHQ9Y2I1 1504 aa13.34□□□□□ -0.27
FARP1-219ENST00000596580 DCAF8L2P0C7V8 631 aa13.19□□□□□ -0.3
FARP1-219ENST00000596580 PELP1Q8IZL8 1130 aaKnown RBP12.93□□□□□ -0.34
FARP1-219ENST00000596580 FAM9AQ8IZU1 332 aaPredicted RBP12.6□□□□□ -0.39
FARP1-219ENST00000596580 SUPT5HO00267 1087 aaKnown RBP12.6□□□□□ -0.39
FARP1-219ENST00000596580 APLP2Q06481 763 aa12.53□□□□□ -0.4
FARP1-219ENST00000596580 ZEB1P37275 1124 aaPredicted RBP12.34□□□□□ -0.43
FARP1-219ENST00000596580 SHROOM4Q9ULL8 1493 aa12.3□□□□□ -0.44
FARP1-219ENST00000596580 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.44
FARP1-219ENST00000596580 MYT1Q01538 1121 aa12.19□□□□□ -0.46
FARP1-219ENST00000596580 CENPBP07199 599 aaPredicted RBP12.19□□□□□ -0.46
FARP1-219ENST00000596580 ERICH6Q7L0X2 663 aa11.97□□□□□ -0.49
FARP1-219ENST00000596580 TRIM41Q8WV44 630 aa11.96□□□□□ -0.5
FARP1-219ENST00000596580 NEFLP07196 543 aa11.92□□□□□ -0.5
FARP1-219ENST00000596580 PCGF6Q9BYE7 350 aa11.87□□□□□ -0.51
FARP1-219ENST00000596580 UBTFP17480 764 aaKnown RBP11.8□□□□□ -0.52
FARP1-219ENST00000596580 EHMT2Q96KQ7 1210 aa11.79□□□□□ -0.52
FARP1-219ENST00000596580 YTHDC1Q96MU7 727 aaKnown RBP11.78□□□□□ -0.52
FARP1-219ENST00000596580 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
FARP1-219ENST00000596580 DAXXQ9UER7 740 aaPredicted RBP11.62□□□□□ -0.55
FARP1-219ENST00000596580 ATP1B4Q9UN42 357 aaPredicted RBP11.62□□□□□ -0.55
FARP1-219ENST00000596580 TTBK1Q5TCY1 1321 aaPredicted RBP11.53□□□□□ -0.56
FARP1-219ENST00000596580 CCDC180Q9P1Z9 1646 aa11.51□□□□□ -0.57
FARP1-219ENST00000596580 RANGAP1P46060 587 aaPredicted RBP11.48□□□□□ -0.57
FARP1-219ENST00000596580 HRCP23327 699 aa11.41□□□□□ -0.58
FARP1-219ENST00000596580 CLSPNQ9HAW4 1339 aa11.33□□□□□ -0.59
FARP1-219ENST00000596580 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
FARP1-219ENST00000596580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.33□□□□□ -0.6
FARP1-219ENST00000596580 HNRNPUL2Q1KMD3 747 aaKnown RBP11.33□□□□□ -0.6
FARP1-219ENST00000596580 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
FARP1-219ENST00000596580 MYT1LQ9UL68 1186 aa11.29□□□□□ -0.6
FARP1-219ENST00000596580 CHIC1Q5VXU3 224 aa11.28□□□□□ -0.6
FARP1-219ENST00000596580 ACIN1Q9UKV3 1341 aaKnown RBP11.2□□□□□ -0.62
FARP1-219ENST00000596580 DIEXFQ68CQ4 756 aaKnown RBP11.18□□□□□ -0.62
FARP1-219ENST00000596580 ITGAEP38570 1179 aa11.16□□□□□ -0.62
FARP1-219ENST00000596580 ZBTB47Q9UFB7 747 aaPredicted RBP11.15□□□□□ -0.62
FARP1-219ENST00000596580 ANP32CO43423 234 aa11.14□□□□□ -0.63
FARP1-219ENST00000596580 POLR3GLQ9BT43 218 aa11.13□□□□□ -0.63
FARP1-219ENST00000596580 NEFMP07197 916 aa11.12□□□□□ -0.63
FARP1-219ENST00000596580 CDK11AQ9UQ88 783 aaPredicted RBP11.11□□□□□ -0.63
FARP1-219ENST00000596580 ABCC9O60706 1549 aa11.08□□□□□ -0.64
FARP1-219ENST00000596580 ZCCHC6Q5VYS8 1495 aaKnown RBP11.08□□□□□ -0.64
FARP1-219ENST00000596580 FAM50AQ14320 339 aaKnown RBP11.08□□□□□ -0.64
FARP1-219ENST00000596580 SLC4A1APQ9BWU0 796 aaKnown RBP11.05□□□□□ -0.64
FARP1-219ENST00000596580 DCAF1Q9Y4B6 1507 aa11.05□□□□□ -0.64
FARP1-219ENST00000596580 TRIM52Q96A61 297 aa11.03□□□□□ -0.64
FARP1-219ENST00000596580 PPARGC1BQ86YN6 1023 aaKnown RBP11.02□□□□□ -0.64
FARP1-219ENST00000596580 RB1CC1Q8TDY2 1594 aa11.01□□□□□ -0.65
FARP1-219ENST00000596580 SCRIBQ14160 1630 aa11.01□□□□□ -0.65
FARP1-219ENST00000596580 LOC105371045A0A1W2PR82 267 aa11□□□□□ -0.65
FARP1-219ENST00000596580 EEA1Q15075 1411 aa10.98□□□□□ -0.65
FARP1-219ENST00000596580 ANP32AP39687 249 aaKnown RBP10.97□□□□□ -0.65
FARP1-219ENST00000596580 ANP32BQ92688 251 aaKnown RBP10.96□□□□□ -0.66
FARP1-219ENST00000596580 CANXP27824 592 aaKnown RBP10.95□□□□□ -0.66
FARP1-219ENST00000596580 NACADO15069 1562 aa10.94□□□□□ -0.66
FARP1-219ENST00000596580 CSRNP3Q8WYN3 585 aa10.92□□□□□ -0.66
FARP1-219ENST00000596580 UPF2Q9HAU5 1272 aaKnown RBP10.91□□□□□ -0.66
FARP1-219ENST00000596580 TONSLQ96HA7 1378 aa10.9□□□□□ -0.67
FARP1-219ENST00000596580 EIF5BO60841 1220 aaKnown RBP10.88□□□□□ -0.67
FARP1-219ENST00000596580 NEUROD1Q13562 356 aa10.86□□□□□ -0.67
FARP1-219ENST00000596580 ESF1Q9H501 851 aaKnown RBP10.83□□□□□ -0.68
FARP1-219ENST00000596580 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.83□□□□□ -0.68
FARP1-219ENST00000596580 RSF1Q96T23 1441 aaPredicted RBP10.81□□□□□ -0.68
FARP1-219ENST00000596580 ZNF326Q5BKZ1 582 aaKnown RBP10.8□□□□□ -0.68
FARP1-219ENST00000596580 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
FARP1-219ENST00000596580 ANP32EQ9BTT0 268 aa10.79□□□□□ -0.68
FARP1-219ENST00000596580 HSP90AA1P07900 732 aaKnown RBP10.79□□□□□ -0.68
FARP1-219ENST00000596580 GTF3C3Q9Y5Q9 886 aa10.79□□□□□ -0.68
FARP1-219ENST00000596580 GLIPR1L2Q4G1C9 344 aa10.78□□□□□ -0.68
FARP1-219ENST00000596580 GOLGA3Q08378 1498 aa10.76□□□□□ -0.69
FARP1-219ENST00000596580 FBLN2P98095 1184 aa10.76□□□□□ -0.69
FARP1-219ENST00000596580 SLC24A1O60721 1099 aa10.76□□□□□ -0.69
FARP1-219ENST00000596580 CNGB1Q14028 1251 aaPredicted RBP10.73□□□□□ -0.69
FARP1-219ENST00000596580 BAZ1AQ9NRL2 1556 aaPredicted RBP10.73□□□□□ -0.69
FARP1-219ENST00000596580 NPM1P06748 294 aaKnown RBP eCLIP10.73□□□□□ -0.69
FARP1-219ENST00000596580 CLIP1P30622 1438 aa10.72□□□□□ -0.69
FARP1-219ENST00000596580 MTUS2Q5JR59 1369 aa10.72□□□□□ -0.69
FARP1-219ENST00000596580 BCANQ96GW7 911 aa10.7□□□□□ -0.7
FARP1-219ENST00000596580 CDCA8Q53HL2 280 aa10.7□□□□□ -0.7
FARP1-219ENST00000596580 CEP164Q9UPV0 1460 aa10.69□□□□□ -0.7
FARP1-219ENST00000596580 MYH16Q9H6N6 1097 aa10.69□□□□□ -0.7
FARP1-219ENST00000596580 TSPY4P0CV99 314 aa10.68□□□□□ -0.7
FARP1-219ENST00000596580 TSPY10P0CW01 314 aa10.68□□□□□ -0.7
FARP1-219ENST00000596580 STAG3Q9UJ98 1225 aa10.67□□□□□ -0.7
FARP1-219ENST00000596580 BAZ1BQ9UIG0 1483 aaKnown RBP10.67□□□□□ -0.7
FARP1-219ENST00000596580 KIF27Q86VH2 1401 aa10.66□□□□□ -0.7
FARP1-219ENST00000596580 FHAD1B1AJZ9 1412 aa10.66□□□□□ -0.7
FARP1-219ENST00000596580 WDR43Q15061 677 aaKnown RBP eCLIP10.64□□□□□ -0.71
FARP1-219ENST00000596580 ZNF777Q9ULD5 760 aaPredicted RBP10.64□□□□□ -0.71
FARP1-219ENST00000596580 CHMP4BQ9H444 224 aaKnown RBP10.64□□□□□ -0.71
FARP1-219ENST00000596580 TMC1Q8TDI8 760 aa10.64□□□□□ -0.71
FARP1-219ENST00000596580 BECN1Q14457 450 aa10.63□□□□□ -0.71
FARP1-219ENST00000596580 DDRGK1Q96HY6 314 aa10.63□□□□□ -0.71
FARP1-219ENST00000596580 CCDC136Q96JN2 1154 aa10.61□□□□□ -0.71
FARP1-219ENST00000596580 HNRNPUQ00839 825 aaKnown RBP eCLIP10.6□□□□□ -0.716e-6■■□□□ 13.5
FARP1-219ENST00000596580 GOLGA6L22H0YM25 854 aa10.6□□□□□ -0.71
FARP1-219ENST00000596580 WRNQ14191 1432 aaPredicted RBP eCLIP10.58□□□□□ -0.72
FARP1-219ENST00000596580 MYO15BQ96JP2 1530 aa10.57□□□□□ -0.72
FARP1-219ENST00000596580 EIF4G2P78344 907 aaKnown RBP eCLIP10.57□□□□□ -0.72
FARP1-219ENST00000596580 SMARCA2P51531 1590 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms