RNA–Protein interactions for RNA: ENST00000586017.5

MED16-205, Transcript of mediator complex subunit 16, humanhuman

TSL 1 (best)

Gene MED16, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-205ENST00000586017 NISCHQ9Y2I1 1504 aa36.02■■■■□ 3.36
MED16-205ENST00000586017 CCDC180Q9P1Z9 1646 aa32.03■■■□□ 2.72
MED16-205ENST00000586017 ABCC9O60706 1549 aa31.26■■■□□ 2.59
MED16-205ENST00000586017 RB1CC1Q8TDY2 1594 aa30.14■■■□□ 2.42
MED16-205ENST00000586017 NACADO15069 1562 aa30.12■■■□□ 2.41
MED16-205ENST00000586017 DCAF8L2P0C7V8 631 aa30.07■■■□□ 2.4
MED16-205ENST00000586017 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
MED16-205ENST00000586017 MYO15BQ96JP2 1530 aa29.97■■■□□ 2.39
MED16-205ENST00000586017 DCAF1Q9Y4B6 1507 aa29.83■■■□□ 2.37
MED16-205ENST00000586017 UNC13AQ9UPW8 1703 aa29.43■■■□□ 2.3
MED16-205ENST00000586017 PABPN1Q86U42 306 aaKnown RBP eCLIP29.22■■■□□ 2.27
MED16-205ENST00000586017 BICRAQ9NZM4 1560 aa29.19■■■□□ 2.26
MED16-205ENST00000586017 SCRIBQ14160 1630 aa29.17■■■□□ 2.26
MED16-205ENST00000586017 SHROOM4Q9ULL8 1493 aa28.94■■■□□ 2.22
MED16-205ENST00000586017 DNAJC5BQ9UF47 199 aa28.68■■■□□ 2.18
MED16-205ENST00000586017 EIF4G1Q04637 1599 aaKnown RBP28.42■■■□□ 2.14
MED16-205ENST00000586017 CC2D2AQ9P2K1 1620 aa28.3■■■□□ 2.12
MED16-205ENST00000586017 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
MED16-205ENST00000586017 SMARCA4P51532 1647 aa27.93■■■□□ 2.06
MED16-205ENST00000586017 BAZ1AQ9NRL2 1556 aaPredicted RBP27.92■■■□□ 2.06
MED16-205ENST00000586017 NCAPD3P42695 1498 aa27.79■■■□□ 2.04
MED16-205ENST00000586017 ATAD2BQ9ULI0 1458 aa27.78■■■□□ 2.04
MED16-205ENST00000586017 SMARCA2P51531 1590 aa27.78■■■□□ 2.04
MED16-205ENST00000586017 MROH2BQ7Z745 1585 aa27.73■■■□□ 2.03
MED16-205ENST00000586017 PEG3Q9GZU2 1588 aa27.68■■■□□ 2.02
MED16-205ENST00000586017 HMGXB3Q12766 1538 aa27.64■■■□□ 2.02
MED16-205ENST00000586017 BAZ1BQ9UIG0 1483 aaKnown RBP27.56■■■□□ 2
MED16-205ENST00000586017 RSF1Q96T23 1441 aaPredicted RBP27.44■■□□□ 1.98
MED16-205ENST00000586017 WIZO95785 1651 aa27.44■■□□□ 1.98
MED16-205ENST00000586017 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
MED16-205ENST00000586017 NESP48681 1621 aa27.06■■□□□ 1.92
MED16-205ENST00000586017 LAMC3Q9Y6N6 1575 aa27.05■■□□□ 1.92
MED16-205ENST00000586017 CADPSQ9ULU8 1353 aa26.97■■□□□ 1.91
MED16-205ENST00000586017 ERCC6Q03468 1493 aa26.97■■□□□ 1.91
MED16-205ENST00000586017 PDS5BQ9NTI5 1447 aa26.87■■□□□ 1.89
MED16-205ENST00000586017 CCDC88BA6NC98 1476 aa26.85■■□□□ 1.89
MED16-205ENST00000586017 CFTRP13569 1480 aa26.81■■□□□ 1.88
MED16-205ENST00000586017 SUPT5HO00267 1087 aaKnown RBP26.75■■□□□ 1.87
MED16-205ENST00000586017 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
MED16-205ENST00000586017 CUX2O14529 1486 aa26.7■■□□□ 1.86
MED16-205ENST00000586017 THOC2Q8NI27 1593 aaKnown RBP26.65■■□□□ 1.86
MED16-205ENST00000586017 FANCD2Q9BXW9 1451 aa26.64■■□□□ 1.86
MED16-205ENST00000586017 PRDM2Q13029 1718 aa26.63■■□□□ 1.85
MED16-205ENST00000586017 CEP164Q9UPV0 1460 aa26.61■■□□□ 1.85
MED16-205ENST00000586017 MRC2Q9UBG0 1479 aa26.57■■□□□ 1.84
MED16-205ENST00000586017 WDR62O43379 1518 aa26.47■■□□□ 1.83
MED16-205ENST00000586017 URB2Q14146 1524 aaKnown RBP26.36■■□□□ 1.81
MED16-205ENST00000586017 ABCC8Q09428 1581 aa26.28■■□□□ 1.8
MED16-205ENST00000586017 TOPBP1Q92547 1522 aa26.22■■□□□ 1.79
MED16-205ENST00000586017 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.78
MED16-205ENST00000586017 DNAJC5Q9H3Z4 198 aa26.15■■□□□ 1.78
MED16-205ENST00000586017 IFT140Q96RY7 1462 aa26.06■■□□□ 1.76
MED16-205ENST00000586017 CUX1P39880 1505 aa26.02■■□□□ 1.76
MED16-205ENST00000586017 POLA1P09884 1462 aaPredicted RBP25.99■■□□□ 1.75
MED16-205ENST00000586017 TARBP1Q13395 1621 aaKnown RBP25.93■■□□□ 1.74
MED16-205ENST00000586017 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
MED16-205ENST00000586017 SOGA1O94964 1423 aa25.91■■□□□ 1.74
MED16-205ENST00000586017 ZNF608Q9ULD9 1512 aaPredicted RBP25.91■■□□□ 1.74
MED16-205ENST00000586017 WRNQ14191 1432 aaPredicted RBP eCLIP25.88■■□□□ 1.73
MED16-205ENST00000586017 RAD54L2Q9Y4B4 1467 aa25.86■■□□□ 1.73
MED16-205ENST00000586017 TOP2BQ02880 1626 aa25.83■■□□□ 1.73
MED16-205ENST00000586017 BIVM-ERCC5R4GMW8 1640 aa25.82■■□□□ 1.72
MED16-205ENST00000586017 EIF4G3O43432 1585 aaKnown RBP25.81■■□□□ 1.72
MED16-205ENST00000586017 SYNJ1O43426 1573 aa25.79■■□□□ 1.72
MED16-205ENST00000586017 AQRO60306 1485 aaKnown RBP eCLIP25.78■■□□□ 1.722e-6■■■■□ 25.8
MED16-205ENST00000586017 WDR97A6NE52 1622 aa25.77■■□□□ 1.72
MED16-205ENST00000586017 TDRD9Q8NDG6 1382 aaKnown RBP25.74■■□□□ 1.71
MED16-205ENST00000586017 ABCA10Q8WWZ4 1543 aa25.7■■□□□ 1.71
MED16-205ENST00000586017 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
MED16-205ENST00000586017 GAPVD1Q14C86 1478 aa25.61■■□□□ 1.69
MED16-205ENST00000586017 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
MED16-205ENST00000586017 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
MED16-205ENST00000586017 MAGI1Q96QZ7 1491 aaPredicted RBP25.54■■□□□ 1.68
MED16-205ENST00000586017 PBRM1Q86U86 1689 aa25.53■■□□□ 1.68
MED16-205ENST00000586017 SNAPC4Q5SXM2 1469 aa25.53■■□□□ 1.68
MED16-205ENST00000586017 CHD1O14646 1710 aa25.49■■□□□ 1.67
MED16-205ENST00000586017 FBLN2P98095 1184 aa25.48■■□□□ 1.67
MED16-205ENST00000586017 CHMP7Q8WUX9 453 aaPredicted RBP25.44■■□□□ 1.66
MED16-205ENST00000586017 SYNJ2O15056 1496 aa25.43■■□□□ 1.66
MED16-205ENST00000586017 ERICH3Q5RHP9 1530 aa25.4■■□□□ 1.66
MED16-205ENST00000586017 KIF27Q86VH2 1401 aa25.35■■□□□ 1.65
MED16-205ENST00000586017 ADAMTS12P58397 1594 aa25.32■■□□□ 1.64
MED16-205ENST00000586017 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
MED16-205ENST00000586017 TRIM41Q8WV44 630 aa25.3■■□□□ 1.64
MED16-205ENST00000586017 GRIN2AQ12879 1464 aa25.26■■□□□ 1.63
MED16-205ENST00000586017 IGF1RP08069 1367 aa25.25■■□□□ 1.63
MED16-205ENST00000586017 CLASP1Q7Z460 1538 aa25.22■■□□□ 1.63
MED16-205ENST00000586017 CUL7Q14999 1698 aa25.18■■□□□ 1.62
MED16-205ENST00000586017 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
MED16-205ENST00000586017 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
MED16-205ENST00000586017 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
MED16-205ENST00000586017 NUP160Q12769 1436 aa25.15■■□□□ 1.62
MED16-205ENST00000586017 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
MED16-205ENST00000586017 CEP170Q5SW79 1584 aa25.11■■□□□ 1.61
MED16-205ENST00000586017 CARMIL1Q5VZK9 1371 aa25.1■■□□□ 1.61
MED16-205ENST00000586017 RUSC2Q8N2Y8 1516 aa25.07■■□□□ 1.6
MED16-205ENST00000586017 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
MED16-205ENST00000586017 SHROOM2Q13796 1616 aa24.96■■□□□ 1.59
MED16-205ENST00000586017 RAPGEF2Q9Y4G8 1499 aa24.95■■□□□ 1.58
MED16-205ENST00000586017 ARAP1Q96P48 1450 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms