RNA–Protein interactions for RNA: ENST00000304516.11

INO80E-201, Transcript of INO80 complex subunit E, humanhuman

TSL 2 BASIC

Gene INO80E, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-201ENST00000304516 NISCHQ9Y2I1 1504 aa43.2■■■■■ 4.51
INO80E-201ENST00000304516 CCDC180Q9P1Z9 1646 aa38.51■■■■□ 3.76
INO80E-201ENST00000304516 ABCC9O60706 1549 aa37.99■■■■□ 3.67
INO80E-201ENST00000304516 RB1CC1Q8TDY2 1594 aa36.37■■■■□ 3.41
INO80E-201ENST00000304516 DCAF8L2P0C7V8 631 aa36.27■■■■□ 3.4
INO80E-201ENST00000304516 NACADO15069 1562 aa36.25■■■■□ 3.39
INO80E-201ENST00000304516 ZCCHC6Q5VYS8 1495 aaKnown RBP35.93■■■■□ 3.34
INO80E-201ENST00000304516 MYO15BQ96JP2 1530 aa35.91■■■■□ 3.34
INO80E-201ENST00000304516 DCAF1Q9Y4B6 1507 aa35.68■■■■□ 3.3
INO80E-201ENST00000304516 UNC13AQ9UPW8 1703 aa35.63■■■■□ 3.29
INO80E-201ENST00000304516 PABPN1Q86U42 306 aaKnown RBP eCLIP35.48■■■■□ 3.271e-6■■■□□ 19
INO80E-201ENST00000304516 BICRAQ9NZM4 1560 aa35.32■■■■□ 3.25
INO80E-201ENST00000304516 SCRIBQ14160 1630 aa35.19■■■■□ 3.22
INO80E-201ENST00000304516 DNAJC5BQ9UF47 199 aa35.12■■■■□ 3.21
INO80E-201ENST00000304516 SHROOM4Q9ULL8 1493 aa34.83■■■■□ 3.17
INO80E-201ENST00000304516 EIF4G1Q04637 1599 aaKnown RBP34.4■■■■□ 3.1
INO80E-201ENST00000304516 CC2D2AQ9P2K1 1620 aa34.35■■■■□ 3.09
INO80E-201ENST00000304516 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
INO80E-201ENST00000304516 SMARCA4P51532 1647 aa33.6■■■□□ 2.97
INO80E-201ENST00000304516 BAZ1AQ9NRL2 1556 aaPredicted RBP33.49■■■□□ 2.95
INO80E-201ENST00000304516 ATAD2BQ9ULI0 1458 aa33.47■■■□□ 2.95
INO80E-201ENST00000304516 NCAPD3P42695 1498 aa33.46■■■□□ 2.95
INO80E-201ENST00000304516 SMARCA2P51531 1590 aa33.39■■■□□ 2.93
INO80E-201ENST00000304516 MROH2BQ7Z745 1585 aa33.33■■■□□ 2.93
INO80E-201ENST00000304516 HMGXB3Q12766 1538 aa33.27■■■□□ 2.92
INO80E-201ENST00000304516 PEG3Q9GZU2 1588 aa33.23■■■□□ 2.91
INO80E-201ENST00000304516 BAZ1BQ9UIG0 1483 aaKnown RBP33.18■■■□□ 2.9
INO80E-201ENST00000304516 WIZO95785 1651 aa32.98■■■□□ 2.87
INO80E-201ENST00000304516 RSF1Q96T23 1441 aaPredicted RBP32.83■■■□□ 2.85
INO80E-201ENST00000304516 NESP48681 1621 aa32.82■■■□□ 2.84
INO80E-201ENST00000304516 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
INO80E-201ENST00000304516 LAMC3Q9Y6N6 1575 aa32.62■■■□□ 2.81
INO80E-201ENST00000304516 TOP2AP11388 1531 aaKnown RBP32.56■■■□□ 2.8
INO80E-201ENST00000304516 CADPSQ9ULU8 1353 aa32.48■■■□□ 2.79
INO80E-201ENST00000304516 CUX2O14529 1486 aa32.44■■■□□ 2.78
INO80E-201ENST00000304516 KIF21AQ7Z4S6 1674 aa32.42■■■□□ 2.78
INO80E-201ENST00000304516 PDS5BQ9NTI5 1447 aa32.4■■■□□ 2.78
INO80E-201ENST00000304516 THOC2Q8NI27 1593 aaKnown RBP32.34■■■□□ 2.77
INO80E-201ENST00000304516 CFTRP13569 1480 aa32.23■■■□□ 2.75
INO80E-201ENST00000304516 CCDC88BA6NC98 1476 aa32.2■■■□□ 2.74
INO80E-201ENST00000304516 FANCD2Q9BXW9 1451 aa32.14■■■□□ 2.74
INO80E-201ENST00000304516 MRC2Q9UBG0 1479 aa32.11■■■□□ 2.73
INO80E-201ENST00000304516 CEP164Q9UPV0 1460 aa32.11■■■□□ 2.73
INO80E-201ENST00000304516 SUPT5HO00267 1087 aaKnown RBP32.1■■■□□ 2.73
INO80E-201ENST00000304516 WDR62O43379 1518 aa32.02■■■□□ 2.72
INO80E-201ENST00000304516 PRDM2Q13029 1718 aa32■■■□□ 2.71
INO80E-201ENST00000304516 URB2Q14146 1524 aaKnown RBP31.85■■■□□ 2.69
INO80E-201ENST00000304516 DNAJC5Q9H3Z4 198 aa31.77■■■□□ 2.68
INO80E-201ENST00000304516 TOPBP1Q92547 1522 aa31.6■■■□□ 2.65
INO80E-201ENST00000304516 DNMBPQ6XZF7 1577 aa31.52■■■□□ 2.64
INO80E-201ENST00000304516 ABCC8Q09428 1581 aa31.51■■■□□ 2.63
INO80E-201ENST00000304516 IFT140Q96RY7 1462 aa31.42■■■□□ 2.62
INO80E-201ENST00000304516 ZNF608Q9ULD9 1512 aaPredicted RBP31.37■■■□□ 2.61
INO80E-201ENST00000304516 POLA1P09884 1462 aaPredicted RBP31.31■■■□□ 2.6
INO80E-201ENST00000304516 CUX1P39880 1505 aa31.28■■■□□ 2.6
INO80E-201ENST00000304516 TARBP1Q13395 1621 aaKnown RBP31.27■■■□□ 2.6
INO80E-201ENST00000304516 EIF4G3O43432 1585 aaKnown RBP31.22■■■□□ 2.59
INO80E-201ENST00000304516 FGD5Q6ZNL6 1462 aa31.21■■■□□ 2.59
INO80E-201ENST00000304516 RAD54L2Q9Y4B4 1467 aa31.21■■■□□ 2.59
INO80E-201ENST00000304516 SOGA1O94964 1423 aa31.17■■■□□ 2.58
INO80E-201ENST00000304516 AQRO60306 1485 aaKnown RBP eCLIP31.16■■■□□ 2.581e-7■■■■■ 40.7
INO80E-201ENST00000304516 OSCARQ8IYS5 282 aa31.07■■■□□ 2.56
INO80E-201ENST00000304516 TDRD9Q8NDG6 1382 aaKnown RBP31.06■■■□□ 2.56
INO80E-201ENST00000304516 WDR97A6NE52 1622 aa30.96■■■□□ 2.55
INO80E-201ENST00000304516 WRNQ14191 1432 aaPredicted RBP eCLIP30.96■■■□□ 2.55
INO80E-201ENST00000304516 SYNJ1O43426 1573 aa30.94■■■□□ 2.54
INO80E-201ENST00000304516 TOP2BQ02880 1626 aa30.92■■■□□ 2.54
INO80E-201ENST00000304516 BIVM-ERCC5R4GMW8 1640 aa30.92■■■□□ 2.54
INO80E-201ENST00000304516 CHD1O14646 1710 aa30.9■■■□□ 2.54
INO80E-201ENST00000304516 ABCA10Q8WWZ4 1543 aa30.85■■■□□ 2.53
INO80E-201ENST00000304516 SNAPC4Q5SXM2 1469 aa30.84■■■□□ 2.53
INO80E-201ENST00000304516 FBLN2P98095 1184 aa30.84■■■□□ 2.53
INO80E-201ENST00000304516 GRIN2BQ13224 1484 aa30.82■■■□□ 2.52
INO80E-201ENST00000304516 GAPVD1Q14C86 1478 aa30.81■■■□□ 2.52
INO80E-201ENST00000304516 ABCA5Q8WWZ7 1642 aa30.79■■■□□ 2.52
INO80E-201ENST00000304516 PBRM1Q86U86 1689 aa30.79■■■□□ 2.52
INO80E-201ENST00000304516 MAGI1Q96QZ7 1491 aaPredicted RBP30.75■■■□□ 2.51
INO80E-201ENST00000304516 TRIM41Q8WV44 630 aa30.69■■■□□ 2.5
INO80E-201ENST00000304516 CHMP7Q8WUX9 453 aaPredicted RBP30.68■■■□□ 2.5
INO80E-201ENST00000304516 SYNJ2O15056 1496 aa30.66■■■□□ 2.5
INO80E-201ENST00000304516 RIMBP3CA6NJZ7 1639 aa30.65■■■□□ 2.5
INO80E-201ENST00000304516 RIMBP3BA6NNM3 1639 aa30.65■■■□□ 2.5
INO80E-201ENST00000304516 RIMBP3Q9UFD9 1639 aa30.65■■■□□ 2.5
INO80E-201ENST00000304516 ARHGEF11O15085 1522 aa30.6■■■□□ 2.49
INO80E-201ENST00000304516 CLASP1Q7Z460 1538 aa30.52■■■□□ 2.48
INO80E-201ENST00000304516 ADAMTS12P58397 1594 aa30.51■■■□□ 2.47
INO80E-201ENST00000304516 ERICH3Q5RHP9 1530 aa30.48■■■□□ 2.47
INO80E-201ENST00000304516 GRIN2AQ12879 1464 aa30.44■■■□□ 2.46
INO80E-201ENST00000304516 FHAD1B1AJZ9 1412 aa30.42■■■□□ 2.46
INO80E-201ENST00000304516 CYB5RLQ6IPT4 315 aa30.34■■■□□ 2.45
INO80E-201ENST00000304516 ARAP1Q96P48 1450 aa30.34■■■□□ 2.45
INO80E-201ENST00000304516 CEP170Q5SW79 1584 aa30.33■■■□□ 2.45
INO80E-201ENST00000304516 KIF27Q86VH2 1401 aa30.32■■■□□ 2.44
INO80E-201ENST00000304516 NUP160Q12769 1436 aa30.29■■■□□ 2.44
INO80E-201ENST00000304516 IGF1RP08069 1367 aa30.23■■■□□ 2.43
INO80E-201ENST00000304516 CUL7Q14999 1698 aa30.16■■■□□ 2.42
INO80E-201ENST00000304516 ERCC6L2Q5T890 1561 aa30.13■■■□□ 2.41
INO80E-201ENST00000304516 SHROOM2Q13796 1616 aa30.12■■■□□ 2.41
INO80E-201ENST00000304516 CHIC1Q5VXU3 224 aa30.12■■■□□ 2.41
INO80E-201ENST00000304516 RUSC2Q8N2Y8 1516 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms