RNA–Protein interactions for RNA: ENST00000589119.5

MED16-207, Transcript of mediator complex subunit 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MED16, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-207ENST00000589119 NISCHQ9Y2I1 1504 aa32.86■■■□□ 2.85
MED16-207ENST00000589119 CCDC180Q9P1Z9 1646 aa28.12■■■□□ 2.09
MED16-207ENST00000589119 SHROOM4Q9ULL8 1493 aa27.79■■■□□ 2.04
MED16-207ENST00000589119 ZCCHC6Q5VYS8 1495 aaKnown RBP27.68■■■□□ 2.02
MED16-207ENST00000589119 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
MED16-207ENST00000589119 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.91
MED16-207ENST00000589119 DCAF1Q9Y4B6 1507 aa26.89■■□□□ 1.89
MED16-207ENST00000589119 ABCC9O60706 1549 aa26.6■■□□□ 1.85
MED16-207ENST00000589119 SCRIBQ14160 1630 aa26.38■■□□□ 1.81
MED16-207ENST00000589119 MYO15BQ96JP2 1530 aa26.27■■□□□ 1.8
MED16-207ENST00000589119 NACADO15069 1562 aa26.12■■□□□ 1.77
MED16-207ENST00000589119 CHIC1Q5VXU3 224 aa26.03■■□□□ 1.76
MED16-207ENST00000589119 RSF1Q96T23 1441 aaPredicted RBP25.84■■□□□ 1.73
MED16-207ENST00000589119 RB1CC1Q8TDY2 1594 aa25.82■■□□□ 1.72
MED16-207ENST00000589119 HRCP23327 699 aa25.78■■□□□ 1.72
MED16-207ENST00000589119 PCGF6Q9BYE7 350 aa25.78■■□□□ 1.72
MED16-207ENST00000589119 CECR2Q9BXF3 1484 aa25.73■■□□□ 1.71
MED16-207ENST00000589119 PPARGC1BQ86YN6 1023 aaKnown RBP25.58■■□□□ 1.69
MED16-207ENST00000589119 MROH2BQ7Z745 1585 aa25.57■■□□□ 1.68
MED16-207ENST00000589119 LOC105371045A0A1W2PR82 267 aa25.55■■□□□ 1.68
MED16-207ENST00000589119 UNC13AQ9UPW8 1703 aa25.5■■□□□ 1.67
MED16-207ENST00000589119 WIZO95785 1651 aa25.42■■□□□ 1.66
MED16-207ENST00000589119 PABPN1Q86U42 306 aaKnown RBP eCLIP25.38■■□□□ 1.65
MED16-207ENST00000589119 BAZ1AQ9NRL2 1556 aaPredicted RBP25.26■■□□□ 1.63
MED16-207ENST00000589119 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
MED16-207ENST00000589119 SMARCA4P51532 1647 aa25.14■■□□□ 1.61
MED16-207ENST00000589119 TRIM41Q8WV44 630 aa25.14■■□□□ 1.61
MED16-207ENST00000589119 FAM9AQ8IZU1 332 aaPredicted RBP25■■□□□ 1.59
MED16-207ENST00000589119 TOP2AP11388 1531 aaKnown RBP24.94■■□□□ 1.58
MED16-207ENST00000589119 EHMT2Q96KQ7 1210 aa24.93■■□□□ 1.58
MED16-207ENST00000589119 TRIM26Q12899 539 aaPredicted RBP24.91■■□□□ 1.58
MED16-207ENST00000589119 CCDC88BA6NC98 1476 aa24.87■■□□□ 1.57
MED16-207ENST00000589119 SMARCA2P51531 1590 aa24.82■■□□□ 1.56
MED16-207ENST00000589119 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
MED16-207ENST00000589119 ABCC8Q09428 1581 aa24.69■■□□□ 1.54
MED16-207ENST00000589119 PEG3Q9GZU2 1588 aa24.62■■□□□ 1.53
MED16-207ENST00000589119 ATAD2BQ9ULI0 1458 aa24.62■■□□□ 1.53
MED16-207ENST00000589119 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
MED16-207ENST00000589119 SOGA1O94964 1423 aa24.36■■□□□ 1.49
MED16-207ENST00000589119 ZEB1P37275 1124 aaPredicted RBP24.32■■□□□ 1.48
MED16-207ENST00000589119 RUSC2Q8N2Y8 1516 aa24.29■■□□□ 1.48
MED16-207ENST00000589119 WRNQ14191 1432 aaPredicted RBP eCLIP24.28■■□□□ 1.48
MED16-207ENST00000589119 SYNJ1O43426 1573 aa24.21■■□□□ 1.47
MED16-207ENST00000589119 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
MED16-207ENST00000589119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.15■■□□□ 1.46
MED16-207ENST00000589119 TTBK1Q5TCY1 1321 aaPredicted RBP24.14■■□□□ 1.46
MED16-207ENST00000589119 CSRNP3Q8WYN3 585 aa24.14■■□□□ 1.45
MED16-207ENST00000589119 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.45
MED16-207ENST00000589119 HMGXB3Q12766 1538 aa24.13■■□□□ 1.45
MED16-207ENST00000589119 UBTFP17480 764 aaKnown RBP24.04■■□□□ 1.44
MED16-207ENST00000589119 EEA1Q15075 1411 aa24■■□□□ 1.43
MED16-207ENST00000589119 CCER1Q8TC90 406 aaPredicted RBP23.98■■□□□ 1.43
MED16-207ENST00000589119 CEP162Q5TB80 1403 aa23.96■■□□□ 1.43
MED16-207ENST00000589119 TNIKQ9UKE5 1360 aa23.92■■□□□ 1.42
MED16-207ENST00000589119 CC2D2AQ9P2K1 1620 aa23.91■■□□□ 1.42
MED16-207ENST00000589119 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
MED16-207ENST00000589119 GOLGA3Q08378 1498 aa23.88■■□□□ 1.41
MED16-207ENST00000589119 CFTRP13569 1480 aa23.87■■□□□ 1.41
MED16-207ENST00000589119 CUX1P39880 1505 aa23.82■■□□□ 1.4
MED16-207ENST00000589119 BIVM-ERCC5R4GMW8 1640 aa23.81■■□□□ 1.4
MED16-207ENST00000589119 RANGAP1P46060 587 aaPredicted RBP23.8■■□□□ 1.4
MED16-207ENST00000589119 CEP164Q9UPV0 1460 aa23.79■■□□□ 1.4
MED16-207ENST00000589119 RAPGEF2Q9Y4G8 1499 aa23.76■■□□□ 1.39
MED16-207ENST00000589119 KIF21BO75037 1637 aa23.75■■□□□ 1.39
MED16-207ENST00000589119 NEUROD1Q13562 356 aa23.74■■□□□ 1.39
MED16-207ENST00000589119 CADPSQ9ULU8 1353 aa23.72■■□□□ 1.39
MED16-207ENST00000589119 DIEXFQ68CQ4 756 aaKnown RBP23.66■■□□□ 1.38
MED16-207ENST00000589119 ACIN1Q9UKV3 1341 aaKnown RBP23.64■■□□□ 1.38
MED16-207ENST00000589119 PRDM2Q13029 1718 aa23.64■■□□□ 1.37
MED16-207ENST00000589119 CLIP1P30622 1438 aa23.62■■□□□ 1.37
MED16-207ENST00000589119 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
MED16-207ENST00000589119 NESP48681 1621 aa23.57■■□□□ 1.36
MED16-207ENST00000589119 PELP1Q8IZL8 1130 aaKnown RBP23.55■■□□□ 1.36
MED16-207ENST00000589119 KIF27Q86VH2 1401 aa23.55■■□□□ 1.36
MED16-207ENST00000589119 PRXQ9BXM0 1461 aa23.54■■□□□ 1.36
MED16-207ENST00000589119 GTF3C3Q9Y5Q9 886 aa23.52■■□□□ 1.36
MED16-207ENST00000589119 FANCD2Q9BXW9 1451 aa23.5■■□□□ 1.35
MED16-207ENST00000589119 FGD5Q6ZNL6 1462 aa23.48■■□□□ 1.35
MED16-207ENST00000589119 CUX2O14529 1486 aa23.47■■□□□ 1.35
MED16-207ENST00000589119 ERICH3Q5RHP9 1530 aa23.44■■□□□ 1.34
MED16-207ENST00000589119 VPS8Q8N3P4 1428 aa23.43■■□□□ 1.34
MED16-207ENST00000589119 HNRNPUL2Q1KMD3 747 aaKnown RBP23.4■■□□□ 1.34
MED16-207ENST00000589119 YTHDC1Q96MU7 727 aaKnown RBP23.4■■□□□ 1.34
MED16-207ENST00000589119 IGF1RP08069 1367 aa23.38■■□□□ 1.33
MED16-207ENST00000589119 RAD54L2Q9Y4B4 1467 aa23.35■■□□□ 1.33
MED16-207ENST00000589119 CENPBP07199 599 aaPredicted RBP23.34■■□□□ 1.33
MED16-207ENST00000589119 APLP2Q06481 763 aa23.33■■□□□ 1.33
MED16-207ENST00000589119 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
MED16-207ENST00000589119 ZNF316A6NFI3 1004 aaPredicted RBP23.3■■□□□ 1.32
MED16-207ENST00000589119 TOPBP1Q92547 1522 aa23.29■■□□□ 1.32
MED16-207ENST00000589119 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
MED16-207ENST00000589119 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.32
MED16-207ENST00000589119 POLA1P09884 1462 aaPredicted RBP23.26■■□□□ 1.31
MED16-207ENST00000589119 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
MED16-207ENST00000589119 URB2Q14146 1524 aaKnown RBP23.21■■□□□ 1.31
MED16-207ENST00000589119 MIER1Q8N108 512 aa23.2■■□□□ 1.3
MED16-207ENST00000589119 ARHGAP35Q9NRY4 1499 aa23.2■■□□□ 1.3
MED16-207ENST00000589119 KANK4Q5T7N3 995 aaPredicted RBP23.19■■□□□ 1.3
MED16-207ENST00000589119 ABCA10Q8WWZ4 1543 aa23.14■■□□□ 1.3
MED16-207ENST00000589119 KIF21AQ7Z4S6 1674 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms