RNA–Protein interactions for RNA: ENST00000562291.2

INO80E-204, Transcript of INO80 complex subunit E, humanhuman

TSL 3

Gene INO80E, Length 255 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-204ENST00000562291 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.38
INO80E-204ENST00000562291 CCDC180Q9P1Z9 1646 aa21.02■□□□□ 0.96
INO80E-204ENST00000562291 ABCC9O60706 1549 aa20.99■□□□□ 0.95
INO80E-204ENST00000562291 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.81
INO80E-204ENST00000562291 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
INO80E-204ENST00000562291 NACADO15069 1562 aa19.91■□□□□ 0.78
INO80E-204ENST00000562291 PABPN1Q86U42 306 aaKnown RBP eCLIP19.68■□□□□ 0.74
INO80E-204ENST00000562291 MYO15BQ96JP2 1530 aa19.67■□□□□ 0.74
INO80E-204ENST00000562291 DNAJC5BQ9UF47 199 aa19.6■□□□□ 0.73
INO80E-204ENST00000562291 ZCCHC6Q5VYS8 1495 aaKnown RBP19.58■□□□□ 0.72
INO80E-204ENST00000562291 DCAF1Q9Y4B6 1507 aa19.49■□□□□ 0.71
INO80E-204ENST00000562291 UNC13AQ9UPW8 1703 aa19.46■□□□□ 0.71
INO80E-204ENST00000562291 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
INO80E-204ENST00000562291 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
INO80E-204ENST00000562291 SHROOM4Q9ULL8 1493 aa19.1■□□□□ 0.65
INO80E-204ENST00000562291 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
INO80E-204ENST00000562291 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.62
INO80E-204ENST00000562291 CECR2Q9BXF3 1484 aa18.87■□□□□ 0.61
INO80E-204ENST00000562291 NCAPD3P42695 1498 aa18.42■□□□□ 0.54
INO80E-204ENST00000562291 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
INO80E-204ENST00000562291 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
INO80E-204ENST00000562291 SMARCA2P51531 1590 aa18.32■□□□□ 0.52
INO80E-204ENST00000562291 BAZ1AQ9NRL2 1556 aaPredicted RBP18.32■□□□□ 0.52
INO80E-204ENST00000562291 MROH2BQ7Z745 1585 aa18.22■□□□□ 0.51
INO80E-204ENST00000562291 HMGXB3Q12766 1538 aa18.22■□□□□ 0.51
INO80E-204ENST00000562291 BAZ1BQ9UIG0 1483 aaKnown RBP18.21■□□□□ 0.51
INO80E-204ENST00000562291 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
INO80E-204ENST00000562291 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
INO80E-204ENST00000562291 NESP48681 1621 aa18.07■□□□□ 0.48
INO80E-204ENST00000562291 WIZO95785 1651 aa17.99■□□□□ 0.47
INO80E-204ENST00000562291 CUX2O14529 1486 aa17.96■□□□□ 0.47
INO80E-204ENST00000562291 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
INO80E-204ENST00000562291 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
INO80E-204ENST00000562291 LAMC3Q9Y6N6 1575 aa17.91■□□□□ 0.46
INO80E-204ENST00000562291 PDS5BQ9NTI5 1447 aa17.9■□□□□ 0.46
INO80E-204ENST00000562291 DNAJC5Q9H3Z4 198 aa17.86■□□□□ 0.45
INO80E-204ENST00000562291 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
INO80E-204ENST00000562291 KIF21AQ7Z4S6 1674 aa17.75■□□□□ 0.43
INO80E-204ENST00000562291 THOC2Q8NI27 1593 aaKnown RBP17.73■□□□□ 0.43
INO80E-204ENST00000562291 CFTRP13569 1480 aa17.69■□□□□ 0.42
INO80E-204ENST00000562291 MRC2Q9UBG0 1479 aa17.68■□□□□ 0.42
INO80E-204ENST00000562291 FANCD2Q9BXW9 1451 aa17.67■□□□□ 0.42
INO80E-204ENST00000562291 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
INO80E-204ENST00000562291 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
INO80E-204ENST00000562291 WDR62O43379 1518 aa17.57■□□□□ 0.4
INO80E-204ENST00000562291 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
INO80E-204ENST00000562291 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
INO80E-204ENST00000562291 PRDM2Q13029 1718 aa17.4■□□□□ 0.38
INO80E-204ENST00000562291 OSCARQ8IYS5 282 aa17.35■□□□□ 0.37
INO80E-204ENST00000562291 ABCC8Q09428 1581 aa17.35■□□□□ 0.37
INO80E-204ENST00000562291 TOPBP1Q92547 1522 aa17.33■□□□□ 0.37
INO80E-204ENST00000562291 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
INO80E-204ENST00000562291 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
INO80E-204ENST00000562291 ZNF608Q9ULD9 1512 aaPredicted RBP17.25■□□□□ 0.35
INO80E-204ENST00000562291 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
INO80E-204ENST00000562291 SOGA1O94964 1423 aa17.19■□□□□ 0.34
INO80E-204ENST00000562291 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.341e-7■■■■■ 40.7
INO80E-204ENST00000562291 POLA1P09884 1462 aaPredicted RBP17.17■□□□□ 0.34
INO80E-204ENST00000562291 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
INO80E-204ENST00000562291 FBLN2P98095 1184 aa17.14■□□□□ 0.33
INO80E-204ENST00000562291 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
INO80E-204ENST00000562291 TARBP1Q13395 1621 aaKnown RBP17.11■□□□□ 0.33
INO80E-204ENST00000562291 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
INO80E-204ENST00000562291 CUX1P39880 1505 aa17.09■□□□□ 0.33
INO80E-204ENST00000562291 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
INO80E-204ENST00000562291 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
INO80E-204ENST00000562291 GRIN2BQ13224 1484 aa16.95■□□□□ 0.3
INO80E-204ENST00000562291 SNAPC4Q5SXM2 1469 aa16.94■□□□□ 0.3
INO80E-204ENST00000562291 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
INO80E-204ENST00000562291 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
INO80E-204ENST00000562291 WDR97A6NE52 1622 aa16.93■□□□□ 0.3
INO80E-204ENST00000562291 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
INO80E-204ENST00000562291 CHD1O14646 1710 aa16.93■□□□□ 0.3
INO80E-204ENST00000562291 RIMBP3CA6NJZ7 1639 aa16.91■□□□□ 0.3
INO80E-204ENST00000562291 RIMBP3BA6NNM3 1639 aa16.91■□□□□ 0.3
INO80E-204ENST00000562291 RIMBP3Q9UFD9 1639 aa16.91■□□□□ 0.3
INO80E-204ENST00000562291 ABCA10Q8WWZ4 1543 aa16.91■□□□□ 0.3
INO80E-204ENST00000562291 MAGI1Q96QZ7 1491 aaPredicted RBP16.9■□□□□ 0.3
INO80E-204ENST00000562291 ARHGEF11O15085 1522 aa16.89■□□□□ 0.29
INO80E-204ENST00000562291 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
INO80E-204ENST00000562291 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
INO80E-204ENST00000562291 SYNJ1O43426 1573 aa16.83■□□□□ 0.28
INO80E-204ENST00000562291 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
INO80E-204ENST00000562291 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
INO80E-204ENST00000562291 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
INO80E-204ENST00000562291 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
INO80E-204ENST00000562291 ARAP1Q96P48 1450 aa16.73■□□□□ 0.27
INO80E-204ENST00000562291 FHAD1B1AJZ9 1412 aa16.72■□□□□ 0.27
INO80E-204ENST00000562291 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
INO80E-204ENST00000562291 GRIN2AQ12879 1464 aa16.7■□□□□ 0.26
INO80E-204ENST00000562291 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
INO80E-204ENST00000562291 ADAMTS12P58397 1594 aa16.65■□□□□ 0.26
INO80E-204ENST00000562291 IGF1RP08069 1367 aa16.64■□□□□ 0.25
INO80E-204ENST00000562291 NUP160Q12769 1436 aa16.63■□□□□ 0.25
INO80E-204ENST00000562291 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
INO80E-204ENST00000562291 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
INO80E-204ENST00000562291 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
INO80E-204ENST00000562291 PRG4Q92954 1404 aaPredicted RBP16.53■□□□□ 0.24
INO80E-204ENST00000562291 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
INO80E-204ENST00000562291 ERCC6L2Q5T890 1561 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms