RNA–Protein interactions for RNA: ENST00000607471.5

MED16-212, Transcript of mediator complex subunit 16, humanhuman

TSL 1 (best)

Gene MED16, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-212ENST00000607471 NISCHQ9Y2I1 1504 aa32.8■■■□□ 2.84
MED16-212ENST00000607471 CCDC180Q9P1Z9 1646 aa27.87■■■□□ 2.05
MED16-212ENST00000607471 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
MED16-212ENST00000607471 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
MED16-212ENST00000607471 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
MED16-212ENST00000607471 DCAF1Q9Y4B6 1507 aa27.02■■□□□ 1.92
MED16-212ENST00000607471 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
MED16-212ENST00000607471 CHIC1Q5VXU3 224 aa26.83■■□□□ 1.89
MED16-212ENST00000607471 MYO15BQ96JP2 1530 aa26.77■■□□□ 1.88
MED16-212ENST00000607471 ABCC9O60706 1549 aa26.48■■□□□ 1.83
MED16-212ENST00000607471 HRCP23327 699 aa26.24■■□□□ 1.79
MED16-212ENST00000607471 PCGF6Q9BYE7 350 aa26.02■■□□□ 1.76
MED16-212ENST00000607471 SCRIBQ14160 1630 aa26■■□□□ 1.75
MED16-212ENST00000607471 RSF1Q96T23 1441 aaPredicted RBP25.99■■□□□ 1.75
MED16-212ENST00000607471 LOC105371045A0A1W2PR82 267 aa25.95■■□□□ 1.75
MED16-212ENST00000607471 RB1CC1Q8TDY2 1594 aa25.76■■□□□ 1.71
MED16-212ENST00000607471 NACADO15069 1562 aa25.71■■□□□ 1.71
MED16-212ENST00000607471 TRIM26Q12899 539 aaPredicted RBP25.6■■□□□ 1.69
MED16-212ENST00000607471 PPARGC1BQ86YN6 1023 aaKnown RBP25.56■■□□□ 1.68
MED16-212ENST00000607471 TRIM41Q8WV44 630 aa25.54■■□□□ 1.68
MED16-212ENST00000607471 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
MED16-212ENST00000607471 MROH2BQ7Z745 1585 aa25.47■■□□□ 1.67
MED16-212ENST00000607471 WIZO95785 1651 aa25.33■■□□□ 1.65
MED16-212ENST00000607471 FAM9AQ8IZU1 332 aaPredicted RBP25.24■■□□□ 1.63
MED16-212ENST00000607471 BAZ1AQ9NRL2 1556 aaPredicted RBP25.24■■□□□ 1.63
MED16-212ENST00000607471 EIF4G1Q04637 1599 aaKnown RBP25.17■■□□□ 1.62
MED16-212ENST00000607471 ZEB1P37275 1124 aaPredicted RBP25.12■■□□□ 1.61
MED16-212ENST00000607471 TOP2AP11388 1531 aaKnown RBP24.98■■□□□ 1.59
MED16-212ENST00000607471 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
MED16-212ENST00000607471 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
MED16-212ENST00000607471 UNC13AQ9UPW8 1703 aa24.9■■□□□ 1.58
MED16-212ENST00000607471 CCDC88BA6NC98 1476 aa24.86■■□□□ 1.57
MED16-212ENST00000607471 SMARCA2P51531 1590 aa24.85■■□□□ 1.57
MED16-212ENST00000607471 ABCC8Q09428 1581 aa24.77■■□□□ 1.56
MED16-212ENST00000607471 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.54
MED16-212ENST00000607471 PABPN1Q86U42 306 aaKnown RBP eCLIP24.66■■□□□ 1.54
MED16-212ENST00000607471 BICRAQ9NZM4 1560 aa24.64■■□□□ 1.54
MED16-212ENST00000607471 SOGA1O94964 1423 aa24.58■■□□□ 1.53
MED16-212ENST00000607471 EEA1Q15075 1411 aa24.57■■□□□ 1.52
MED16-212ENST00000607471 TNIKQ9UKE5 1360 aa24.56■■□□□ 1.52
MED16-212ENST00000607471 CEP162Q5TB80 1403 aa24.55■■□□□ 1.52
MED16-212ENST00000607471 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
MED16-212ENST00000607471 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
MED16-212ENST00000607471 CSRNP3Q8WYN3 585 aa24.46■■□□□ 1.51
MED16-212ENST00000607471 DNAJC5BQ9UF47 199 aa24.46■■□□□ 1.51
MED16-212ENST00000607471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.45■■□□□ 1.5
MED16-212ENST00000607471 CCER1Q8TC90 406 aaPredicted RBP24.39■■□□□ 1.5
MED16-212ENST00000607471 GOLGA3Q08378 1498 aa24.36■■□□□ 1.49
MED16-212ENST00000607471 SYNJ1O43426 1573 aa24.27■■□□□ 1.48
MED16-212ENST00000607471 UBTFP17480 764 aaKnown RBP24.27■■□□□ 1.48
MED16-212ENST00000607471 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
MED16-212ENST00000607471 KIF21BO75037 1637 aa24.24■■□□□ 1.47
MED16-212ENST00000607471 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
MED16-212ENST00000607471 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
MED16-212ENST00000607471 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
MED16-212ENST00000607471 BAZ1BQ9UIG0 1483 aaKnown RBP24.14■■□□□ 1.46
MED16-212ENST00000607471 CLIP1P30622 1438 aa24.05■■□□□ 1.44
MED16-212ENST00000607471 DIEXFQ68CQ4 756 aaKnown RBP24.03■■□□□ 1.44
MED16-212ENST00000607471 VPS8Q8N3P4 1428 aa24■■□□□ 1.43
MED16-212ENST00000607471 TOP2BQ02880 1626 aa24■■□□□ 1.43
MED16-212ENST00000607471 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
MED16-212ENST00000607471 RAPGEF2Q9Y4G8 1499 aa23.99■■□□□ 1.43
MED16-212ENST00000607471 ACIN1Q9UKV3 1341 aaKnown RBP23.97■■□□□ 1.43
MED16-212ENST00000607471 PELP1Q8IZL8 1130 aaKnown RBP23.97■■□□□ 1.43
MED16-212ENST00000607471 BIVM-ERCC5R4GMW8 1640 aa23.94■■□□□ 1.42
MED16-212ENST00000607471 NEUROD1Q13562 356 aa23.89■■□□□ 1.42
MED16-212ENST00000607471 ZNF316A6NFI3 1004 aaPredicted RBP23.88■■□□□ 1.41
MED16-212ENST00000607471 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
MED16-212ENST00000607471 PRXQ9BXM0 1461 aa23.82■■□□□ 1.4
MED16-212ENST00000607471 HMGXB3Q12766 1538 aa23.8■■□□□ 1.4
MED16-212ENST00000607471 NCAPD3P42695 1498 aa23.8■■□□□ 1.4
MED16-212ENST00000607471 HNRNPUL2Q1KMD3 747 aaKnown RBP23.8■■□□□ 1.4
MED16-212ENST00000607471 CENPBP07199 599 aaPredicted RBP23.76■■□□□ 1.39
MED16-212ENST00000607471 APLP2Q06481 763 aa23.74■■□□□ 1.39
MED16-212ENST00000607471 CUX1P39880 1505 aa23.71■■□□□ 1.39
MED16-212ENST00000607471 ARAP1Q96P48 1450 aa23.71■■□□□ 1.39
MED16-212ENST00000607471 GTF3C3Q9Y5Q9 886 aa23.64■■□□□ 1.37
MED16-212ENST00000607471 CFTRP13569 1480 aa23.63■■□□□ 1.37
MED16-212ENST00000607471 RANGAP1P46060 587 aaPredicted RBP23.62■■□□□ 1.37
MED16-212ENST00000607471 KIF27Q86VH2 1401 aa23.6■■□□□ 1.37
MED16-212ENST00000607471 CLSPNQ9HAW4 1339 aa23.56■■□□□ 1.36
MED16-212ENST00000607471 KANK4Q5T7N3 995 aaPredicted RBP23.53■■□□□ 1.36
MED16-212ENST00000607471 MIER1Q8N108 512 aa23.52■■□□□ 1.36
MED16-212ENST00000607471 RRBP1Q9P2E9 1410 aaKnown RBP23.51■■□□□ 1.35
MED16-212ENST00000607471 DHX57Q6P158 1386 aaKnown RBP23.51■■□□□ 1.35
MED16-212ENST00000607471 PRDM2Q13029 1718 aa23.48■■□□□ 1.35
MED16-212ENST00000607471 ARHGAP35Q9NRY4 1499 aa23.47■■□□□ 1.35
MED16-212ENST00000607471 CUX2O14529 1486 aa23.45■■□□□ 1.34
MED16-212ENST00000607471 IGF1RP08069 1367 aa23.37■■□□□ 1.33
MED16-212ENST00000607471 YTHDC1Q96MU7 727 aaKnown RBP23.34■■□□□ 1.33
MED16-212ENST00000607471 CCNB3Q8WWL7 1395 aa23.33■■□□□ 1.33
MED16-212ENST00000607471 MAP3K1Q13233 1512 aa23.31■■□□□ 1.32
MED16-212ENST00000607471 CADPSQ9ULU8 1353 aa23.3■■□□□ 1.32
MED16-212ENST00000607471 TIAM1Q13009 1591 aa23.25■■□□□ 1.31
MED16-212ENST00000607471 CARMIL1Q5VZK9 1371 aa23.23■■□□□ 1.31
MED16-212ENST00000607471 FGD5Q6ZNL6 1462 aa23.23■■□□□ 1.31
MED16-212ENST00000607471 LRRC9Q6ZRR7 1453 aa23.15■■□□□ 1.3
MED16-212ENST00000607471 RAB3GAP2Q9H2M9 1393 aa23.13■■□□□ 1.29
MED16-212ENST00000607471 MAPKBP1O60336 1514 aa23.12■■□□□ 1.29
MED16-212ENST00000607471 MYT1Q01538 1121 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms