Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSSCA1O60232 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSSCA1O60232 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSSCA1O60232 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.59■□□□□ 0.89
SSSCA1O60232 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SSSCA1O60232 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.59■□□□□ 0.89
SSSCA1O60232 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSSCA1O60232 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SSSCA1O60232 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.59■□□□□ 0.89
SSSCA1O60232 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSSCA1O60232 AC127502.1-201ENST00000399971 1502 ntBASIC20.58■□□□□ 0.89
SSSCA1O60232 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.58■□□□□ 0.89
SSSCA1O60232 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSSCA1O60232 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SSSCA1O60232 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.58■□□□□ 0.88
SSSCA1O60232 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSSCA1O60232 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SSSCA1O60232 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SSSCA1O60232 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SSSCA1O60232 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SSSCA1O60232 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSSCA1O60232 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSSCA1O60232 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSSCA1O60232 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSSCA1O60232 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.55■□□□□ 0.88
SSSCA1O60232 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSSCA1O60232 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SSSCA1O60232 AC100797.4-201ENST00000631653 1827 ntBASIC20.55■□□□□ 0.88
SSSCA1O60232 AC091060.1-201ENST00000623524 1766 ntBASIC20.54■□□□□ 0.88
SSSCA1O60232 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSSCA1O60232 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSSCA1O60232 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SSSCA1O60232 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSSCA1O60232 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.53■□□□□ 0.88
SSSCA1O60232 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSSCA1O60232 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSSCA1O60232 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SSSCA1O60232 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSSCA1O60232 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSSCA1O60232 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.51■□□□□ 0.87
SSSCA1O60232 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSSCA1O60232 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSSCA1O60232 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSSCA1O60232 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.5■□□□□ 0.87
SSSCA1O60232 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SSSCA1O60232 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSSCA1O60232 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SSSCA1O60232 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.48■□□□□ 0.87
SSSCA1O60232 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSSCA1O60232 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSSCA1O60232 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSSCA1O60232 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SSSCA1O60232 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SSSCA1O60232 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSSCA1O60232 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSSCA1O60232 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSSCA1O60232 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSSCA1O60232 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.46■□□□□ 0.87
SSSCA1O60232 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SSSCA1O60232 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.46■□□□□ 0.87
SSSCA1O60232 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSSCA1O60232 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.45■□□□□ 0.86
SSSCA1O60232 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSSCA1O60232 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.45■□□□□ 0.86
SSSCA1O60232 AP002414.2-202ENST00000590929 1450 ntBASIC20.44■□□□□ 0.86
SSSCA1O60232 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSSCA1O60232 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.44■□□□□ 0.86
SSSCA1O60232 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSSCA1O60232 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSSCA1O60232 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SSSCA1O60232 AC020928.2-201ENST00000588717 2197 ntBASIC20.43■□□□□ 0.86
SSSCA1O60232 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.43■□□□□ 0.86
SSSCA1O60232 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.43■□□□□ 0.86
SSSCA1O60232 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSSCA1O60232 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSSCA1O60232 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.43■□□□□ 0.86
SSSCA1O60232 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSSCA1O60232 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.42■□□□□ 0.86
SSSCA1O60232 AC145676.1-201ENST00000514988 2004 ntBASIC20.42■□□□□ 0.86
SSSCA1O60232 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SSSCA1O60232 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSSCA1O60232 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSSCA1O60232 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSSCA1O60232 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SSSCA1O60232 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSSCA1O60232 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSSCA1O60232 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.41■□□□□ 0.86
SSSCA1O60232 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms